MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Dinoroseobacter shibae DFL 12 plasmid pDSHI03

Total Repeats: 146

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009957	TCC	2	6	783	788	0 %	33.33 %	0 %	66.67 %	Non-Coding
2	NC_009957	CCT	2	6	1635	1640	0 %	33.33 %	0 %	66.67 %	Non-Coding
3	NC_009957	ACA	3	9	1657	1665	66.67 %	0 %	0 %	33.33 %	Non-Coding
4	NC_009957	CAA	2	6	1714	1719	66.67 %	0 %	0 %	33.33 %	Non-Coding
5	NC_009957	CGT	2	6	1725	1730	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6	NC_009957	CTT	2	6	1747	1752	0 %	66.67 %	0 %	33.33 %	Non-Coding
7	NC_009957	GAG	2	6	1791	1796	33.33 %	0 %	66.67 %	0 %	Non-Coding
8	NC_009957	CGT	2	6	5143	5148	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9	NC_009957	TTG	2	6	5170	5175	0 %	66.67 %	33.33 %	0 %	Non-Coding
10	NC_009957	CCT	2	6	5822	5827	0 %	33.33 %	0 %	66.67 %	Non-Coding
11	NC_009957	CAA	2	6	6857	6862	66.67 %	0 %	0 %	33.33 %	Non-Coding
12	NC_009957	TGA	2	6	7363	7368	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
13	NC_009957	CAC	2	6	12785	12790	33.33 %	0 %	0 %	66.67 %	Non-Coding
14	NC_009957	GAT	2	6	12797	12802	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
15	NC_009957	GTT	2	6	12810	12815	0 %	66.67 %	33.33 %	0 %	Non-Coding
16	NC_009957	CTG	2	6	12951	12956	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17	NC_009957	CGA	2	6	12965	12970	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
18	NC_009957	TAG	2	6	13709	13714	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19	NC_009957	TAG	2	6	13752	13757	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
20	NC_009957	AAC	2	6	13834	13839	66.67 %	0 %	0 %	33.33 %	Non-Coding
21	NC_009957	CAT	2	6	14568	14573	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
22	NC_009957	CGT	2	6	14934	14939	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
23	NC_009957	GGC	2	6	14948	14953	0 %	0 %	66.67 %	33.33 %	Non-Coding
24	NC_009957	TTG	2	6	15002	15007	0 %	66.67 %	33.33 %	0 %	Non-Coding
25	NC_009957	CAC	2	6	17698	17703	33.33 %	0 %	0 %	66.67 %	Non-Coding
26	NC_009957	CAA	2	6	26092	26097	66.67 %	0 %	0 %	33.33 %	Non-Coding
27	NC_009957	CGA	2	6	26617	26622	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
28	NC_009957	GAG	2	6	27369	27374	33.33 %	0 %	66.67 %	0 %	Non-Coding
29	NC_009957	CGG	2	6	29191	29196	0 %	0 %	66.67 %	33.33 %	Non-Coding
30	NC_009957	GGC	2	6	29204	29209	0 %	0 %	66.67 %	33.33 %	Non-Coding
31	NC_009957	AGA	2	6	29261	29266	66.67 %	0 %	33.33 %	0 %	Non-Coding
32	NC_009957	CAG	2	6	29301	29306	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
33	NC_009957	GCT	2	6	30421	30426	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
34	NC_009957	GCA	2	6	30454	30459	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
35	NC_009957	AGC	2	6	30843	30848	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
36	NC_009957	CAT	2	6	31740	31745	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
37	NC_009957	GCA	2	6	31786	31791	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
38	NC_009957	CGC	2	6	31821	31826	0 %	0 %	33.33 %	66.67 %	Non-Coding
39	NC_009957	GGC	2	6	31879	31884	0 %	0 %	66.67 %	33.33 %	Non-Coding
40	NC_009957	TGG	2	6	32204	32209	0 %	33.33 %	66.67 %	0 %	Non-Coding
41	NC_009957	GTT	2	6	32285	32290	0 %	66.67 %	33.33 %	0 %	Non-Coding
42	NC_009957	TAA	2	6	33058	33063	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_009957	GAA	2	6	33117	33122	66.67 %	0 %	33.33 %	0 %	Non-Coding
44	NC_009957	GGT	2	6	43016	43021	0 %	33.33 %	66.67 %	0 %	Non-Coding
45	NC_009957	CGC	2	6	44637	44642	0 %	0 %	33.33 %	66.67 %	Non-Coding
46	NC_009957	TCG	2	6	44651	44656	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
47	NC_009957	GCA	2	6	44686	44691	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
48	NC_009957	CTT	2	6	46688	46693	0 %	66.67 %	0 %	33.33 %	Non-Coding
49	NC_009957	CAT	2	6	46836	46841	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
50	NC_009957	CGA	2	6	46869	46874	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51	NC_009957	ACA	2	6	46940	46945	66.67 %	0 %	0 %	33.33 %	Non-Coding
52	NC_009957	CTT	2	6	46954	46959	0 %	66.67 %	0 %	33.33 %	Non-Coding
53	NC_009957	TGC	2	6	47119	47124	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
54	NC_009957	CTT	2	6	48347	48352	0 %	66.67 %	0 %	33.33 %	Non-Coding
55	NC_009957	AGA	2	6	48474	48479	66.67 %	0 %	33.33 %	0 %	Non-Coding
56	NC_009957	ACA	2	6	48494	48499	66.67 %	0 %	0 %	33.33 %	Non-Coding
57	NC_009957	TCT	2	6	48504	48509	0 %	66.67 %	0 %	33.33 %	Non-Coding
58	NC_009957	CAC	2	6	48587	48592	33.33 %	0 %	0 %	66.67 %	Non-Coding
59	NC_009957	GAA	2	6	53520	53525	66.67 %	0 %	33.33 %	0 %	Non-Coding
60	NC_009957	CCA	2	6	53550	53555	33.33 %	0 %	0 %	66.67 %	Non-Coding
61	NC_009957	ATA	2	6	53575	53580	66.67 %	33.33 %	0 %	0 %	Non-Coding
62	NC_009957	AGG	2	6	53811	53816	33.33 %	0 %	66.67 %	0 %	Non-Coding
63	NC_009957	GCG	2	6	53935	53940	0 %	0 %	66.67 %	33.33 %	Non-Coding
64	NC_009957	AGG	2	6	53975	53980	33.33 %	0 %	66.67 %	0 %	Non-Coding
65	NC_009957	CCG	2	6	53999	54004	0 %	0 %	33.33 %	66.67 %	Non-Coding
66	NC_009957	GCC	2	6	54033	54038	0 %	0 %	33.33 %	66.67 %	Non-Coding
67	NC_009957	GGC	2	6	54054	54059	0 %	0 %	66.67 %	33.33 %	Non-Coding
68	NC_009957	CCG	2	6	54371	54376	0 %	0 %	33.33 %	66.67 %	Non-Coding
69	NC_009957	AGG	2	6	54459	54464	33.33 %	0 %	66.67 %	0 %	Non-Coding
70	NC_009957	CCA	2	6	54496	54501	33.33 %	0 %	0 %	66.67 %	Non-Coding
71	NC_009957	TGA	2	6	54538	54543	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
72	NC_009957	ACC	2	6	54576	54581	33.33 %	0 %	0 %	66.67 %	Non-Coding
73	NC_009957	GCT	2	6	54639	54644	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
74	NC_009957	AGA	2	6	55930	55935	66.67 %	0 %	33.33 %	0 %	Non-Coding
75	NC_009957	ACG	2	6	55937	55942	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
76	NC_009957	GCC	2	6	55948	55953	0 %	0 %	33.33 %	66.67 %	Non-Coding
77	NC_009957	GAG	2	6	56925	56930	33.33 %	0 %	66.67 %	0 %	Non-Coding
78	NC_009957	CCA	2	6	56931	56936	33.33 %	0 %	0 %	66.67 %	Non-Coding
79	NC_009957	GCC	2	6	57000	57005	0 %	0 %	33.33 %	66.67 %	Non-Coding
80	NC_009957	GGA	2	6	57146	57151	33.33 %	0 %	66.67 %	0 %	Non-Coding
81	NC_009957	GCG	2	6	57244	57249	0 %	0 %	66.67 %	33.33 %	Non-Coding
82	NC_009957	CGG	2	6	57288	57293	0 %	0 %	66.67 %	33.33 %	Non-Coding
83	NC_009957	GAG	2	6	57301	57306	33.33 %	0 %	66.67 %	0 %	Non-Coding
84	NC_009957	CGC	2	6	57349	57354	0 %	0 %	33.33 %	66.67 %	Non-Coding
85	NC_009957	TCC	2	6	64865	64870	0 %	33.33 %	0 %	66.67 %	Non-Coding
86	NC_009957	AAG	2	6	64873	64878	66.67 %	0 %	33.33 %	0 %	Non-Coding
87	NC_009957	TGG	2	6	64881	64886	0 %	33.33 %	66.67 %	0 %	Non-Coding
88	NC_009957	ACG	2	6	64891	64896	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
89	NC_009957	AAG	2	6	64898	64903	66.67 %	0 %	33.33 %	0 %	Non-Coding
90	NC_009957	CGC	2	6	65901	65906	0 %	0 %	33.33 %	66.67 %	Non-Coding
91	NC_009957	TCG	2	6	73834	73839	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
92	NC_009957	CCG	2	6	73846	73851	0 %	0 %	33.33 %	66.67 %	Non-Coding
93	NC_009957	CAT	2	6	73910	73915	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
94	NC_009957	AAC	2	6	73953	73958	66.67 %	0 %	0 %	33.33 %	Non-Coding
95	NC_009957	CCG	2	6	76581	76586	0 %	0 %	33.33 %	66.67 %	Non-Coding
96	NC_009957	AGA	2	6	76707	76712	66.67 %	0 %	33.33 %	0 %	Non-Coding
97	NC_009957	GCG	2	6	76714	76719	0 %	0 %	66.67 %	33.33 %	Non-Coding
98	NC_009957	CCA	2	6	76725	76730	33.33 %	0 %	0 %	66.67 %	Non-Coding
99	NC_009957	GGC	2	6	76791	76796	0 %	0 %	66.67 %	33.33 %	Non-Coding
100	NC_009957	TCA	2	6	76802	76807	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
101	NC_009957	TCA	2	6	76827	76832	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
102	NC_009957	CTG	2	6	76855	76860	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
103	NC_009957	CCT	2	6	76872	76877	0 %	33.33 %	0 %	66.67 %	Non-Coding
104	NC_009957	CAT	2	6	76899	76904	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
105	NC_009957	CGG	2	6	77007	77012	0 %	0 %	66.67 %	33.33 %	Non-Coding
106	NC_009957	GAT	2	6	77101	77106	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
107	NC_009957	ACA	2	6	78292	78297	66.67 %	0 %	0 %	33.33 %	Non-Coding
108	NC_009957	TGC	2	6	80231	80236	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
109	NC_009957	CTG	2	6	80287	80292	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
110	NC_009957	GTG	2	6	81741	81746	0 %	33.33 %	66.67 %	0 %	Non-Coding
111	NC_009957	GTG	3	9	85554	85562	0 %	33.33 %	66.67 %	0 %	Non-Coding
112	NC_009957	GAA	2	6	86140	86145	66.67 %	0 %	33.33 %	0 %	Non-Coding
113	NC_009957	GCA	2	6	86226	86231	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
114	NC_009957	AAG	2	6	87606	87611	66.67 %	0 %	33.33 %	0 %	Non-Coding
115	NC_009957	CCT	2	6	89062	89067	0 %	33.33 %	0 %	66.67 %	Non-Coding
116	NC_009957	GTC	2	6	91417	91422	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
117	NC_009957	CTG	2	6	91448	91453	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
118	NC_009957	GTG	2	6	98224	98229	0 %	33.33 %	66.67 %	0 %	Non-Coding
119	NC_009957	GGC	2	6	98595	98600	0 %	0 %	66.67 %	33.33 %	Non-Coding
120	NC_009957	CGC	2	6	99017	99022	0 %	0 %	33.33 %	66.67 %	Non-Coding
121	NC_009957	GGA	2	6	99080	99085	33.33 %	0 %	66.67 %	0 %	Non-Coding
122	NC_009957	GCC	2	6	100130	100135	0 %	0 %	33.33 %	66.67 %	Non-Coding
123	NC_009957	CAT	2	6	100270	100275	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
124	NC_009957	AGC	2	6	100346	100351	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
125	NC_009957	ATC	2	6	100735	100740	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
126	NC_009957	CAT	2	6	100788	100793	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
127	NC_009957	GGT	2	6	100796	100801	0 %	33.33 %	66.67 %	0 %	Non-Coding
128	NC_009957	TCA	2	6	100826	100831	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
129	NC_009957	TCT	2	6	100894	100899	0 %	66.67 %	0 %	33.33 %	Non-Coding
130	NC_009957	TGT	2	6	100939	100944	0 %	66.67 %	33.33 %	0 %	Non-Coding
131	NC_009957	GTG	2	6	102361	102366	0 %	33.33 %	66.67 %	0 %	Non-Coding
132	NC_009957	TTC	2	6	107135	107140	0 %	66.67 %	0 %	33.33 %	Non-Coding
133	NC_009957	GAT	2	6	107788	107793	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
134	NC_009957	CGC	2	6	110242	110247	0 %	0 %	33.33 %	66.67 %	Non-Coding
135	NC_009957	CGG	2	6	116698	116703	0 %	0 %	66.67 %	33.33 %	Non-Coding
136	NC_009957	GAC	2	6	116738	116743	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
137	NC_009957	AGA	2	6	116778	116783	66.67 %	0 %	33.33 %	0 %	Non-Coding
138	NC_009957	CAG	2	6	117283	117288	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
139	NC_009957	GTA	2	6	118500	118505	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
140	NC_009957	CGT	2	6	118543	118548	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
141	NC_009957	CTT	2	6	118675	118680	0 %	66.67 %	0 %	33.33 %	Non-Coding
142	NC_009957	TCC	2	6	118742	118747	0 %	33.33 %	0 %	66.67 %	Non-Coding
143	NC_009957	AAG	2	6	118797	118802	66.67 %	0 %	33.33 %	0 %	Non-Coding
144	NC_009957	ACC	2	6	122991	122996	33.33 %	0 %	0 %	66.67 %	Non-Coding
145	NC_009957	GGT	2	6	123001	123006	0 %	33.33 %	66.67 %	0 %	Non-Coding
146	NC_009957	GAA	2	6	123286	123291	66.67 %	0 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.