MICAS: Microsatellite Analysis Server 3.0

Penta-nucleotide Non-Coding Repeats of Dinoroseobacter shibae DFL 12 plasmid pDSHI02

Total Repeats: 20

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009956	CAGGG	2	10	11579	11588	20 %	0 %	60 %	20 %	Non-Coding
2	NC_009956	GCTTT	2	10	12845	12854	0 %	60 %	20 %	20 %	Non-Coding
3	NC_009956	GCCCG	2	10	23048	23057	0 %	0 %	40 %	60 %	Non-Coding
4	NC_009956	GACCA	2	10	37976	37985	40 %	0 %	20 %	40 %	Non-Coding
5	NC_009956	CAAGG	2	10	46627	46636	40 %	0 %	40 %	20 %	Non-Coding
6	NC_009956	GCAGG	2	10	65750	65759	20 %	0 %	60 %	20 %	Non-Coding
7	NC_009956	GTCCT	2	10	74686	74695	0 %	40 %	20 %	40 %	Non-Coding
8	NC_009956	GGACA	2	10	80769	80778	40 %	0 %	40 %	20 %	Non-Coding
9	NC_009956	CGCAG	2	10	80791	80800	20 %	0 %	40 %	40 %	Non-Coding
10	NC_009956	GGCCC	2	10	83351	83360	0 %	0 %	40 %	60 %	Non-Coding
11	NC_009956	GCCGC	2	10	83474	83483	0 %	0 %	40 %	60 %	Non-Coding
12	NC_009956	CGCTG	2	10	97798	97807	0 %	20 %	40 %	40 %	Non-Coding
13	NC_009956	GCGCA	2	10	100178	100187	20 %	0 %	40 %	40 %	Non-Coding
14	NC_009956	TGAAT	2	10	101928	101937	40 %	40 %	20 %	0 %	Non-Coding
15	NC_009956	CAGAC	2	10	101986	101995	40 %	0 %	20 %	40 %	Non-Coding
16	NC_009956	GCGGG	2	10	102177	102186	0 %	0 %	80 %	20 %	Non-Coding
17	NC_009956	AAGCA	2	10	103286	103295	60 %	0 %	20 %	20 %	Non-Coding
18	NC_009956	ACCGC	2	10	132409	132418	20 %	0 %	20 %	60 %	Non-Coding
19	NC_009956	GCCGT	2	10	132501	132510	0 %	20 %	40 %	40 %	Non-Coding
20	NC_009956	TGATC	2	10	146198	146207	20 %	40 %	20 %	20 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.