Penta-nucleotide Coding Repeats of Dinoroseobacter shibae DFL 12 plasmid pDSHI02
Total Repeats: 117
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_009956 | CCGAC | 2 | 10 | 750 | 759 | 20 % | 0 % | 20 % | 60 % | 159046332 |
2 | NC_009956 | CGTCG | 2 | 10 | 1923 | 1932 | 0 % | 20 % | 40 % | 40 % | 159046333 |
3 | NC_009956 | CGGGG | 2 | 10 | 2399 | 2408 | 0 % | 0 % | 80 % | 20 % | 159046333 |
4 | NC_009956 | TCGGC | 2 | 10 | 3196 | 3205 | 0 % | 20 % | 40 % | 40 % | 159046334 |
5 | NC_009956 | CGGGG | 2 | 10 | 4999 | 5008 | 0 % | 0 % | 80 % | 20 % | 159046336 |
6 | NC_009956 | CGCGC | 2 | 10 | 5598 | 5607 | 0 % | 0 % | 40 % | 60 % | 159046336 |
7 | NC_009956 | GGCCG | 2 | 10 | 5855 | 5864 | 0 % | 0 % | 60 % | 40 % | 159046337 |
8 | NC_009956 | GGAGC | 2 | 10 | 6404 | 6413 | 20 % | 0 % | 60 % | 20 % | 159046337 |
9 | NC_009956 | CTGGG | 2 | 10 | 7213 | 7222 | 0 % | 20 % | 60 % | 20 % | 159046339 |
10 | NC_009956 | CCCGG | 2 | 10 | 8867 | 8876 | 0 % | 0 % | 40 % | 60 % | 159046341 |
11 | NC_009956 | GGATC | 2 | 10 | 9215 | 9224 | 20 % | 20 % | 40 % | 20 % | 159046341 |
12 | NC_009956 | GATCG | 2 | 10 | 9375 | 9384 | 20 % | 20 % | 40 % | 20 % | 159046341 |
13 | NC_009956 | CCGCG | 2 | 10 | 11553 | 11562 | 0 % | 0 % | 40 % | 60 % | 159046342 |
14 | NC_009956 | GCGGT | 2 | 10 | 12226 | 12235 | 0 % | 20 % | 60 % | 20 % | 159046344 |
15 | NC_009956 | CCGGG | 2 | 10 | 12995 | 13004 | 0 % | 0 % | 60 % | 40 % | 159046345 |
16 | NC_009956 | CGATC | 2 | 10 | 14501 | 14510 | 20 % | 20 % | 20 % | 40 % | 159046345 |
17 | NC_009956 | CGCGG | 2 | 10 | 15230 | 15239 | 0 % | 0 % | 60 % | 40 % | 159046345 |
18 | NC_009956 | CCGGA | 2 | 10 | 15805 | 15814 | 20 % | 0 % | 40 % | 40 % | 159046345 |
19 | NC_009956 | TGCGC | 2 | 10 | 17381 | 17390 | 0 % | 20 % | 40 % | 40 % | 159046347 |
20 | NC_009956 | GCTCT | 2 | 10 | 18204 | 18213 | 0 % | 40 % | 20 % | 40 % | 159046349 |
21 | NC_009956 | CGGCG | 2 | 10 | 18230 | 18239 | 0 % | 0 % | 60 % | 40 % | 159046349 |
22 | NC_009956 | ATGCC | 2 | 10 | 18464 | 18473 | 20 % | 20 % | 20 % | 40 % | 159046350 |
23 | NC_009956 | CGCCC | 2 | 10 | 19024 | 19033 | 0 % | 0 % | 20 % | 80 % | 159046351 |
24 | NC_009956 | GCGGA | 2 | 10 | 21202 | 21211 | 20 % | 0 % | 60 % | 20 % | 159046352 |
25 | NC_009956 | CTTCG | 2 | 10 | 21725 | 21734 | 0 % | 40 % | 20 % | 40 % | 159046353 |
26 | NC_009956 | TGCGG | 2 | 10 | 22339 | 22348 | 0 % | 20 % | 60 % | 20 % | 159046354 |
27 | NC_009956 | CGGGG | 2 | 10 | 22369 | 22378 | 0 % | 0 % | 80 % | 20 % | 159046354 |
28 | NC_009956 | CGCGC | 2 | 10 | 23148 | 23157 | 0 % | 0 % | 40 % | 60 % | 159046355 |
29 | NC_009956 | TGGCC | 2 | 10 | 26023 | 26032 | 0 % | 20 % | 40 % | 40 % | 159046357 |
30 | NC_009956 | CGGCG | 2 | 10 | 29603 | 29612 | 0 % | 0 % | 60 % | 40 % | 159046362 |
31 | NC_009956 | CGGTC | 2 | 10 | 31848 | 31857 | 0 % | 20 % | 40 % | 40 % | 159046365 |
32 | NC_009956 | CGCGG | 2 | 10 | 32185 | 32194 | 0 % | 0 % | 60 % | 40 % | 159046365 |
33 | NC_009956 | ATCGC | 2 | 10 | 32761 | 32770 | 20 % | 20 % | 20 % | 40 % | 159046366 |
34 | NC_009956 | GACGC | 2 | 10 | 34005 | 34014 | 20 % | 0 % | 40 % | 40 % | 159046366 |
35 | NC_009956 | CGGAC | 2 | 10 | 34068 | 34077 | 20 % | 0 % | 40 % | 40 % | 159046366 |
36 | NC_009956 | GGACC | 2 | 10 | 36611 | 36620 | 20 % | 0 % | 40 % | 40 % | 159046368 |
37 | NC_009956 | GCGAC | 2 | 10 | 37066 | 37075 | 20 % | 0 % | 40 % | 40 % | 159046368 |
38 | NC_009956 | CCGCC | 2 | 10 | 41936 | 41945 | 0 % | 0 % | 20 % | 80 % | 159046373 |
39 | NC_009956 | CAGCG | 2 | 10 | 42025 | 42034 | 20 % | 0 % | 40 % | 40 % | 159046373 |
40 | NC_009956 | GCCCG | 2 | 10 | 42815 | 42824 | 0 % | 0 % | 40 % | 60 % | 159046373 |
41 | NC_009956 | CCCTG | 2 | 10 | 47801 | 47810 | 0 % | 20 % | 20 % | 60 % | 159046378 |
42 | NC_009956 | GCCGC | 2 | 10 | 49055 | 49064 | 0 % | 0 % | 40 % | 60 % | 159046380 |
43 | NC_009956 | GGGCA | 2 | 10 | 49161 | 49170 | 20 % | 0 % | 60 % | 20 % | 159046380 |
44 | NC_009956 | GCGCC | 2 | 10 | 49419 | 49428 | 0 % | 0 % | 40 % | 60 % | 159046380 |
45 | NC_009956 | GGGCC | 2 | 10 | 49511 | 49520 | 0 % | 0 % | 60 % | 40 % | 159046380 |
46 | NC_009956 | CCGCC | 2 | 10 | 51361 | 51370 | 0 % | 0 % | 20 % | 80 % | 159046381 |
47 | NC_009956 | ACGCA | 2 | 10 | 52311 | 52320 | 40 % | 0 % | 20 % | 40 % | 159046383 |
48 | NC_009956 | GACCT | 2 | 10 | 52994 | 53003 | 20 % | 20 % | 20 % | 40 % | 159046384 |
49 | NC_009956 | CGCGG | 2 | 10 | 55169 | 55178 | 0 % | 0 % | 60 % | 40 % | 159046385 |
50 | NC_009956 | CATCC | 2 | 10 | 57352 | 57361 | 20 % | 20 % | 0 % | 60 % | 159046390 |
51 | NC_009956 | CGCTG | 2 | 10 | 58813 | 58822 | 0 % | 20 % | 40 % | 40 % | 159046391 |
52 | NC_009956 | GCCCT | 2 | 10 | 64563 | 64572 | 0 % | 20 % | 20 % | 60 % | 159046395 |
53 | NC_009956 | CGGGC | 2 | 10 | 65659 | 65668 | 0 % | 0 % | 60 % | 40 % | 159046395 |
54 | NC_009956 | CGCGC | 2 | 10 | 67401 | 67410 | 0 % | 0 % | 40 % | 60 % | 159046396 |
55 | NC_009956 | ACCGC | 2 | 10 | 68105 | 68114 | 20 % | 0 % | 20 % | 60 % | 159046396 |
56 | NC_009956 | GCCGG | 2 | 10 | 71957 | 71966 | 0 % | 0 % | 60 % | 40 % | 159046400 |
57 | NC_009956 | GCCGG | 2 | 10 | 79898 | 79907 | 0 % | 0 % | 60 % | 40 % | 159046405 |
58 | NC_009956 | AGGGC | 2 | 10 | 81025 | 81034 | 20 % | 0 % | 60 % | 20 % | 159046406 |
59 | NC_009956 | CGGGG | 2 | 10 | 81965 | 81974 | 0 % | 0 % | 80 % | 20 % | 159046407 |
60 | NC_009956 | AGGGC | 2 | 10 | 82161 | 82170 | 20 % | 0 % | 60 % | 20 % | 159046407 |
61 | NC_009956 | CCGCC | 2 | 10 | 83726 | 83735 | 0 % | 0 % | 20 % | 80 % | 159046408 |
62 | NC_009956 | GGGCG | 2 | 10 | 84165 | 84174 | 0 % | 0 % | 80 % | 20 % | 159046408 |
63 | NC_009956 | GAATG | 2 | 10 | 85100 | 85109 | 40 % | 20 % | 40 % | 0 % | 159046409 |
64 | NC_009956 | TGATC | 2 | 10 | 87482 | 87491 | 20 % | 40 % | 20 % | 20 % | 159046409 |
65 | NC_009956 | CGGCG | 2 | 10 | 88097 | 88106 | 0 % | 0 % | 60 % | 40 % | 159046409 |
66 | NC_009956 | ACGGC | 2 | 10 | 89999 | 90008 | 20 % | 0 % | 40 % | 40 % | 159046410 |
67 | NC_009956 | GGGTC | 2 | 10 | 93143 | 93152 | 0 % | 20 % | 60 % | 20 % | 159046410 |
68 | NC_009956 | GGCGG | 2 | 10 | 93760 | 93769 | 0 % | 0 % | 80 % | 20 % | 159046410 |
69 | NC_009956 | CTGGC | 2 | 10 | 94329 | 94338 | 0 % | 20 % | 40 % | 40 % | 159046411 |
70 | NC_009956 | CGGTG | 2 | 10 | 94459 | 94468 | 0 % | 20 % | 60 % | 20 % | 159046411 |
71 | NC_009956 | GTTGC | 2 | 10 | 95467 | 95476 | 0 % | 40 % | 40 % | 20 % | 159046412 |
72 | NC_009956 | CCGAT | 2 | 10 | 97497 | 97506 | 20 % | 20 % | 20 % | 40 % | 159046414 |
73 | NC_009956 | CTGAT | 2 | 10 | 97554 | 97563 | 20 % | 40 % | 20 % | 20 % | 159046414 |
74 | NC_009956 | GCCGA | 2 | 10 | 98895 | 98904 | 20 % | 0 % | 40 % | 40 % | 159046415 |
75 | NC_009956 | CGGTC | 2 | 10 | 101124 | 101133 | 0 % | 20 % | 40 % | 40 % | 159046416 |
76 | NC_009956 | GCAAA | 2 | 10 | 102328 | 102337 | 60 % | 0 % | 20 % | 20 % | 159046417 |
77 | NC_009956 | TGGCA | 2 | 10 | 103094 | 103103 | 20 % | 20 % | 40 % | 20 % | 159046417 |
78 | NC_009956 | CCGGT | 2 | 10 | 106593 | 106602 | 0 % | 20 % | 40 % | 40 % | 159046421 |
79 | NC_009956 | GCCGT | 2 | 10 | 106984 | 106993 | 0 % | 20 % | 40 % | 40 % | 159046422 |
80 | NC_009956 | GCGCA | 2 | 10 | 107085 | 107094 | 20 % | 0 % | 40 % | 40 % | 159046422 |
81 | NC_009956 | CAAGC | 2 | 10 | 109691 | 109700 | 40 % | 0 % | 20 % | 40 % | 159046423 |
82 | NC_009956 | CTCGG | 2 | 10 | 109702 | 109711 | 0 % | 20 % | 40 % | 40 % | 159046423 |
83 | NC_009956 | CGGTC | 2 | 10 | 111469 | 111478 | 0 % | 20 % | 40 % | 40 % | 159046426 |
84 | NC_009956 | GCAGG | 2 | 10 | 113150 | 113159 | 20 % | 0 % | 60 % | 20 % | 159046427 |
85 | NC_009956 | CGGCG | 2 | 10 | 113198 | 113207 | 0 % | 0 % | 60 % | 40 % | 159046427 |
86 | NC_009956 | GGGCG | 2 | 10 | 113423 | 113432 | 0 % | 0 % | 80 % | 20 % | 159046427 |
87 | NC_009956 | CGAGG | 2 | 10 | 114479 | 114488 | 20 % | 0 % | 60 % | 20 % | 159046429 |
88 | NC_009956 | CCGCG | 2 | 10 | 116658 | 116667 | 0 % | 0 % | 40 % | 60 % | 159046430 |
89 | NC_009956 | CTCGC | 2 | 10 | 117399 | 117408 | 0 % | 20 % | 20 % | 60 % | 159046431 |
90 | NC_009956 | AGGTC | 2 | 10 | 117577 | 117586 | 20 % | 20 % | 40 % | 20 % | 159046431 |
91 | NC_009956 | GGCCG | 2 | 10 | 117726 | 117735 | 0 % | 0 % | 60 % | 40 % | 159046431 |
92 | NC_009956 | GGTCG | 2 | 10 | 119149 | 119158 | 0 % | 20 % | 60 % | 20 % | 159046433 |
93 | NC_009956 | AACCG | 2 | 10 | 119775 | 119784 | 40 % | 0 % | 20 % | 40 % | 159046433 |
94 | NC_009956 | GGCGC | 2 | 10 | 121141 | 121150 | 0 % | 0 % | 60 % | 40 % | 159046434 |
95 | NC_009956 | TGCGA | 2 | 10 | 123645 | 123654 | 20 % | 20 % | 40 % | 20 % | 159046437 |
96 | NC_009956 | CGTCC | 2 | 10 | 124096 | 124105 | 0 % | 20 % | 20 % | 60 % | 159046437 |
97 | NC_009956 | GCAGG | 2 | 10 | 125112 | 125121 | 20 % | 0 % | 60 % | 20 % | 159046438 |
98 | NC_009956 | GCACG | 2 | 10 | 126899 | 126908 | 20 % | 0 % | 40 % | 40 % | 159046439 |
99 | NC_009956 | CCGCT | 2 | 10 | 127200 | 127209 | 0 % | 20 % | 20 % | 60 % | 159046439 |
100 | NC_009956 | GCATC | 2 | 10 | 128492 | 128501 | 20 % | 20 % | 20 % | 40 % | 159046440 |
101 | NC_009956 | CTCGG | 2 | 10 | 129147 | 129156 | 0 % | 20 % | 40 % | 40 % | 159046440 |
102 | NC_009956 | GCTCG | 2 | 10 | 129857 | 129866 | 0 % | 20 % | 40 % | 40 % | 159046441 |
103 | NC_009956 | CAGGG | 2 | 10 | 131441 | 131450 | 20 % | 0 % | 60 % | 20 % | 159046442 |
104 | NC_009956 | TGTGA | 2 | 10 | 133973 | 133982 | 20 % | 40 % | 40 % | 0 % | 159046443 |
105 | NC_009956 | CAGAC | 2 | 10 | 134113 | 134122 | 40 % | 0 % | 20 % | 40 % | 159046444 |
106 | NC_009956 | CGAGT | 2 | 10 | 134582 | 134591 | 20 % | 20 % | 40 % | 20 % | 159046444 |
107 | NC_009956 | CCGGT | 2 | 10 | 136587 | 136596 | 0 % | 20 % | 40 % | 40 % | 159046445 |
108 | NC_009956 | GGGCA | 2 | 10 | 137354 | 137363 | 20 % | 0 % | 60 % | 20 % | 159046446 |
109 | NC_009956 | CACTT | 2 | 10 | 138236 | 138245 | 20 % | 40 % | 0 % | 40 % | 159046447 |
110 | NC_009956 | CCGGC | 2 | 10 | 139258 | 139267 | 0 % | 0 % | 40 % | 60 % | 159046449 |
111 | NC_009956 | CAGCC | 2 | 10 | 140194 | 140203 | 20 % | 0 % | 20 % | 60 % | 159046449 |
112 | NC_009956 | CGATC | 2 | 10 | 143033 | 143042 | 20 % | 20 % | 20 % | 40 % | 159046452 |
113 | NC_009956 | AGTTC | 2 | 10 | 145006 | 145015 | 20 % | 40 % | 20 % | 20 % | 159046456 |
114 | NC_009956 | GTCCG | 2 | 10 | 146357 | 146366 | 0 % | 20 % | 40 % | 40 % | 159046458 |
115 | NC_009956 | CCCGT | 2 | 10 | 150436 | 150445 | 0 % | 20 % | 20 % | 60 % | 159046465 |
116 | NC_009956 | TTGCG | 2 | 10 | 150537 | 150546 | 0 % | 40 % | 40 % | 20 % | 159046465 |
117 | NC_009956 | GCCCG | 2 | 10 | 151531 | 151540 | 0 % | 0 % | 40 % | 60 % | 159046466 |