MICAS: Microsatellite Analysis Server 3.0

Tetra-nucleotide Non-Coding Repeats of Dinoroseobacter shibae DFL 12 plasmid pDSHI02

Total Repeats: 39

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009956	AGGC	2	8	10590	10597	25 %	0 %	50 %	25 %	Non-Coding
2	NC_009956	GTCC	2	8	21983	21990	0 %	25 %	25 %	50 %	Non-Coding
3	NC_009956	CAGA	2	8	22079	22086	50 %	0 %	25 %	25 %	Non-Coding
4	NC_009956	ACCG	2	8	32376	32383	25 %	0 %	25 %	50 %	Non-Coding
5	NC_009956	CGAA	2	8	37468	37475	50 %	0 %	25 %	25 %	Non-Coding
6	NC_009956	CAGG	2	8	48190	48197	25 %	0 %	50 %	25 %	Non-Coding
7	NC_009956	GCCC	3	12	53605	53616	0 %	0 %	25 %	75 %	Non-Coding
8	NC_009956	CCGC	2	8	54186	54193	0 %	0 %	25 %	75 %	Non-Coding
9	NC_009956	GAGG	2	8	55829	55836	25 %	0 %	75 %	0 %	Non-Coding
10	NC_009956	GTGG	2	8	56628	56635	0 %	25 %	75 %	0 %	Non-Coding
11	NC_009956	CCGG	2	8	60544	60551	0 %	0 %	50 %	50 %	Non-Coding
12	NC_009956	AAAC	2	8	63507	63514	75 %	0 %	0 %	25 %	Non-Coding
13	NC_009956	CGCC	2	8	63607	63614	0 %	0 %	25 %	75 %	Non-Coding
14	NC_009956	TGCA	2	8	65788	65795	25 %	25 %	25 %	25 %	Non-Coding
15	NC_009956	TGCC	2	8	69011	69018	0 %	25 %	25 %	50 %	Non-Coding
16	NC_009956	GCGG	2	8	75808	75815	0 %	0 %	75 %	25 %	Non-Coding
17	NC_009956	GGGC	2	8	75897	75904	0 %	0 %	75 %	25 %	Non-Coding
18	NC_009956	AAAG	2	8	84704	84711	75 %	0 %	25 %	0 %	Non-Coding
19	NC_009956	CCAG	2	8	100191	100198	25 %	0 %	25 %	50 %	Non-Coding
20	NC_009956	GTTG	2	8	100473	100480	0 %	50 %	50 %	0 %	Non-Coding
21	NC_009956	GTTT	2	8	102131	102138	0 %	75 %	25 %	0 %	Non-Coding
22	NC_009956	CGGC	2	8	104340	104347	0 %	0 %	50 %	50 %	Non-Coding
23	NC_009956	CGAA	2	8	104770	104777	50 %	0 %	25 %	25 %	Non-Coding
24	NC_009956	GGTT	2	8	108124	108131	0 %	50 %	50 %	0 %	Non-Coding
25	NC_009956	GACC	2	8	108211	108218	25 %	0 %	25 %	50 %	Non-Coding
26	NC_009956	TTCA	2	8	110017	110024	25 %	50 %	0 %	25 %	Non-Coding
27	NC_009956	GGGT	2	8	130462	130469	0 %	25 %	75 %	0 %	Non-Coding
28	NC_009956	TGCG	2	8	132180	132187	0 %	25 %	50 %	25 %	Non-Coding
29	NC_009956	CAGC	2	8	132425	132432	25 %	0 %	25 %	50 %	Non-Coding
30	NC_009956	GAGT	2	8	132522	132529	25 %	25 %	50 %	0 %	Non-Coding
31	NC_009956	ATCT	2	8	132565	132572	25 %	50 %	0 %	25 %	Non-Coding
32	NC_009956	GAAA	2	8	136749	136756	75 %	0 %	25 %	0 %	Non-Coding
33	NC_009956	CCGG	2	8	136776	136783	0 %	0 %	50 %	50 %	Non-Coding
34	NC_009956	GTTT	2	8	136788	136795	0 %	75 %	25 %	0 %	Non-Coding
35	NC_009956	TGGC	2	8	138996	139003	0 %	25 %	50 %	25 %	Non-Coding
36	NC_009956	CCAA	2	8	139073	139080	50 %	0 %	0 %	50 %	Non-Coding
37	NC_009956	CAAC	2	8	141298	141305	50 %	0 %	0 %	50 %	Non-Coding
38	NC_009956	CGAA	2	8	144390	144397	50 %	0 %	25 %	25 %	Non-Coding
39	NC_009956	CTAG	2	8	145701	145708	25 %	25 %	25 %	25 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.