MICAS: Microsatellite Analysis Server 3.0

Penta-nucleotide Non-Coding Repeats of Dinoroseobacter shibae DFL 12 plasmid pDSHI01

Total Repeats: 19

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009955	GCTTC	2	10	3652	3661	0 %	40 %	20 %	40 %	Non-Coding
2	NC_009955	GCACC	2	10	4972	4981	20 %	0 %	20 %	60 %	Non-Coding
3	NC_009955	GAACC	2	10	6037	6046	40 %	0 %	20 %	40 %	Non-Coding
4	NC_009955	GGAAA	2	10	6092	6101	60 %	0 %	40 %	0 %	Non-Coding
5	NC_009955	TTTTA	2	10	50590	50599	20 %	80 %	0 %	0 %	Non-Coding
6	NC_009955	TTGCC	2	10	60584	60593	0 %	40 %	20 %	40 %	Non-Coding
7	NC_009955	TGAAC	2	10	67100	67109	40 %	20 %	20 %	20 %	Non-Coding
8	NC_009955	AGCAC	2	10	67914	67923	40 %	0 %	20 %	40 %	Non-Coding
9	NC_009955	CGCTG	2	10	84080	84089	0 %	20 %	40 %	40 %	Non-Coding
10	NC_009955	GCGCA	2	10	86460	86469	20 %	0 %	40 %	40 %	Non-Coding
11	NC_009955	TGAAT	2	10	88210	88219	40 %	40 %	20 %	0 %	Non-Coding
12	NC_009955	CAGAC	2	10	88268	88277	40 %	0 %	20 %	40 %	Non-Coding
13	NC_009955	TGGTT	2	10	92100	92109	0 %	60 %	40 %	0 %	Non-Coding
14	NC_009955	AGAAC	2	10	106625	106634	60 %	0 %	20 %	20 %	Non-Coding
15	NC_009955	CTGAC	2	10	107146	107155	20 %	20 %	20 %	40 %	Non-Coding
16	NC_009955	CTTTT	2	10	150529	150538	0 %	80 %	0 %	20 %	Non-Coding
17	NC_009955	AACAA	2	10	153715	153724	80 %	0 %	0 %	20 %	Non-Coding
18	NC_009955	GTTTG	2	10	156029	156038	0 %	60 %	40 %	0 %	Non-Coding
19	NC_009955	CGACG	2	10	173685	173694	20 %	0 %	40 %	40 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.