Penta-nucleotide Coding Repeats of Dinoroseobacter shibae DFL 12 plasmid pDSHI01
Total Repeats: 123
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_009955 | GGTCA | 2 | 10 | 77 | 86 | 20 % | 20 % | 40 % | 20 % | 159046136 |
2 | NC_009955 | TTCGC | 2 | 10 | 374 | 383 | 0 % | 40 % | 20 % | 40 % | 159046136 |
3 | NC_009955 | ACGAG | 2 | 10 | 1036 | 1045 | 40 % | 0 % | 40 % | 20 % | 159046137 |
4 | NC_009955 | GTCCT | 2 | 10 | 8784 | 8793 | 0 % | 40 % | 20 % | 40 % | 159046145 |
5 | NC_009955 | GATGC | 2 | 10 | 11354 | 11363 | 20 % | 20 % | 40 % | 20 % | 159046147 |
6 | NC_009955 | CGGAT | 2 | 10 | 12910 | 12919 | 20 % | 20 % | 40 % | 20 % | 159046148 |
7 | NC_009955 | TGGCG | 2 | 10 | 13405 | 13414 | 0 % | 20 % | 60 % | 20 % | 159046149 |
8 | NC_009955 | CGTTT | 2 | 10 | 14085 | 14094 | 0 % | 60 % | 20 % | 20 % | 159046150 |
9 | NC_009955 | GGCTC | 2 | 10 | 15893 | 15902 | 0 % | 20 % | 40 % | 40 % | 159046151 |
10 | NC_009955 | GATCG | 2 | 10 | 15958 | 15967 | 20 % | 20 % | 40 % | 20 % | 159046151 |
11 | NC_009955 | TCGGA | 2 | 10 | 16313 | 16322 | 20 % | 20 % | 40 % | 20 % | 159046151 |
12 | NC_009955 | CGGGA | 2 | 10 | 20456 | 20465 | 20 % | 0 % | 60 % | 20 % | 159046157 |
13 | NC_009955 | TCGGG | 2 | 10 | 24105 | 24114 | 0 % | 20 % | 60 % | 20 % | 159046162 |
14 | NC_009955 | CCAGG | 2 | 10 | 24573 | 24582 | 20 % | 0 % | 40 % | 40 % | 159046163 |
15 | NC_009955 | CGTGG | 2 | 10 | 26853 | 26862 | 0 % | 20 % | 60 % | 20 % | 159046167 |
16 | NC_009955 | CAAGG | 2 | 10 | 30174 | 30183 | 40 % | 0 % | 40 % | 20 % | 159046171 |
17 | NC_009955 | CGGAT | 2 | 10 | 32238 | 32247 | 20 % | 20 % | 40 % | 20 % | 159046173 |
18 | NC_009955 | CGCAA | 2 | 10 | 32297 | 32306 | 40 % | 0 % | 20 % | 40 % | 159046173 |
19 | NC_009955 | GCCGT | 2 | 10 | 32565 | 32574 | 0 % | 20 % | 40 % | 40 % | 159046173 |
20 | NC_009955 | CGGCG | 2 | 10 | 35043 | 35052 | 0 % | 0 % | 60 % | 40 % | 159046174 |
21 | NC_009955 | GCCAC | 2 | 10 | 36181 | 36190 | 20 % | 0 % | 20 % | 60 % | 159046175 |
22 | NC_009955 | TTCGG | 2 | 10 | 40167 | 40176 | 0 % | 40 % | 40 % | 20 % | 159046182 |
23 | NC_009955 | GTCCT | 2 | 10 | 42229 | 42238 | 0 % | 40 % | 20 % | 40 % | 159046183 |
24 | NC_009955 | AGGCG | 2 | 10 | 42663 | 42672 | 20 % | 0 % | 60 % | 20 % | 159046183 |
25 | NC_009955 | TGCCC | 2 | 10 | 45049 | 45058 | 0 % | 20 % | 20 % | 60 % | 159046187 |
26 | NC_009955 | GCCTT | 2 | 10 | 45559 | 45568 | 0 % | 40 % | 20 % | 40 % | 159046188 |
27 | NC_009955 | GCGCC | 2 | 10 | 46855 | 46864 | 0 % | 0 % | 40 % | 60 % | 159046189 |
28 | NC_009955 | GATCC | 2 | 10 | 51091 | 51100 | 20 % | 20 % | 20 % | 40 % | 159046194 |
29 | NC_009955 | CGCCC | 2 | 10 | 53349 | 53358 | 0 % | 0 % | 20 % | 80 % | 159046195 |
30 | NC_009955 | GCGCG | 2 | 10 | 54267 | 54276 | 0 % | 0 % | 60 % | 40 % | 159046196 |
31 | NC_009955 | CGGCG | 2 | 10 | 58371 | 58380 | 0 % | 0 % | 60 % | 40 % | 159046198 |
32 | NC_009955 | CCCCG | 2 | 10 | 59541 | 59550 | 0 % | 0 % | 20 % | 80 % | 159046198 |
33 | NC_009955 | CAAGG | 2 | 10 | 63781 | 63790 | 40 % | 0 % | 40 % | 20 % | 159046203 |
34 | NC_009955 | GTCCG | 2 | 10 | 73293 | 73302 | 0 % | 20 % | 40 % | 40 % | 159046214 |
35 | NC_009955 | GGCCG | 2 | 10 | 73839 | 73848 | 0 % | 0 % | 60 % | 40 % | 159046214 |
36 | NC_009955 | CCCAG | 2 | 10 | 74832 | 74841 | 20 % | 0 % | 20 % | 60 % | 159046215 |
37 | NC_009955 | GGTAG | 2 | 10 | 77353 | 77362 | 20 % | 20 % | 60 % | 0 % | 159046216 |
38 | NC_009955 | GCGAT | 2 | 10 | 77702 | 77711 | 20 % | 20 % | 40 % | 20 % | 159046217 |
39 | NC_009955 | ACCCG | 2 | 10 | 78112 | 78121 | 20 % | 0 % | 20 % | 60 % | 159046218 |
40 | NC_009955 | TCGCC | 2 | 10 | 78859 | 78868 | 0 % | 20 % | 20 % | 60 % | 159046218 |
41 | NC_009955 | GTTGC | 2 | 10 | 81749 | 81758 | 0 % | 40 % | 40 % | 20 % | 159046220 |
42 | NC_009955 | CCGAT | 2 | 10 | 83779 | 83788 | 20 % | 20 % | 20 % | 40 % | 159046222 |
43 | NC_009955 | CTGAT | 2 | 10 | 83836 | 83845 | 20 % | 40 % | 20 % | 20 % | 159046222 |
44 | NC_009955 | GCCGA | 2 | 10 | 85177 | 85186 | 20 % | 0 % | 40 % | 40 % | 159046223 |
45 | NC_009955 | CGGTC | 2 | 10 | 87406 | 87415 | 0 % | 20 % | 40 % | 40 % | 159046224 |
46 | NC_009955 | CGACA | 2 | 10 | 88737 | 88746 | 40 % | 0 % | 20 % | 40 % | 159046225 |
47 | NC_009955 | CCATG | 2 | 10 | 89179 | 89188 | 20 % | 20 % | 20 % | 40 % | 159046226 |
48 | NC_009955 | TACCC | 2 | 10 | 90203 | 90212 | 20 % | 20 % | 0 % | 60 % | 159046227 |
49 | NC_009955 | TCTCG | 2 | 10 | 91253 | 91262 | 0 % | 40 % | 20 % | 40 % | 159046228 |
50 | NC_009955 | GCCGA | 2 | 10 | 93762 | 93771 | 20 % | 0 % | 40 % | 40 % | 159046232 |
51 | NC_009955 | CCCCT | 2 | 10 | 94471 | 94480 | 0 % | 20 % | 0 % | 80 % | 159046233 |
52 | NC_009955 | CGGGG | 2 | 10 | 98245 | 98254 | 0 % | 0 % | 80 % | 20 % | 159046237 |
53 | NC_009955 | TGCCC | 2 | 10 | 99051 | 99060 | 0 % | 20 % | 20 % | 60 % | 159046237 |
54 | NC_009955 | GATCT | 2 | 10 | 99814 | 99823 | 20 % | 40 % | 20 % | 20 % | 159046237 |
55 | NC_009955 | GGGCC | 2 | 10 | 101520 | 101529 | 0 % | 0 % | 60 % | 40 % | 159046239 |
56 | NC_009955 | ACGCC | 2 | 10 | 102581 | 102590 | 20 % | 0 % | 20 % | 60 % | 159046240 |
57 | NC_009955 | GCATG | 2 | 10 | 104595 | 104604 | 20 % | 20 % | 40 % | 20 % | 159046241 |
58 | NC_009955 | TGGTC | 2 | 10 | 104997 | 105006 | 0 % | 40 % | 40 % | 20 % | 159046241 |
59 | NC_009955 | GGGCG | 2 | 10 | 105420 | 105429 | 0 % | 0 % | 80 % | 20 % | 159046241 |
60 | NC_009955 | GAAGC | 2 | 10 | 108066 | 108075 | 40 % | 0 % | 40 % | 20 % | 159046242 |
61 | NC_009955 | ATGCC | 2 | 10 | 112858 | 112867 | 20 % | 20 % | 20 % | 40 % | 159046245 |
62 | NC_009955 | TCGAC | 2 | 10 | 113028 | 113037 | 20 % | 20 % | 20 % | 40 % | 159046245 |
63 | NC_009955 | GCTTC | 2 | 10 | 115272 | 115281 | 0 % | 40 % | 20 % | 40 % | 159046249 |
64 | NC_009955 | CGTGA | 2 | 10 | 116573 | 116582 | 20 % | 20 % | 40 % | 20 % | 159046251 |
65 | NC_009955 | TTCGG | 2 | 10 | 116651 | 116660 | 0 % | 40 % | 40 % | 20 % | 159046251 |
66 | NC_009955 | GCGTG | 2 | 10 | 118687 | 118696 | 0 % | 20 % | 60 % | 20 % | 159046253 |
67 | NC_009955 | GGCGC | 2 | 10 | 119498 | 119507 | 0 % | 0 % | 60 % | 40 % | 159046254 |
68 | NC_009955 | CGGAT | 2 | 10 | 119772 | 119781 | 20 % | 20 % | 40 % | 20 % | 159046255 |
69 | NC_009955 | CGGCG | 2 | 10 | 120038 | 120047 | 0 % | 0 % | 60 % | 40 % | 159046255 |
70 | NC_009955 | ATGAC | 2 | 10 | 122121 | 122130 | 40 % | 20 % | 20 % | 20 % | 159046257 |
71 | NC_009955 | CGGCG | 2 | 10 | 122245 | 122254 | 0 % | 0 % | 60 % | 40 % | 159046257 |
72 | NC_009955 | CCGTC | 2 | 10 | 125454 | 125463 | 0 % | 20 % | 20 % | 60 % | 159046259 |
73 | NC_009955 | ACCGC | 2 | 10 | 125858 | 125867 | 20 % | 0 % | 20 % | 60 % | 159046259 |
74 | NC_009955 | CCGCA | 2 | 10 | 127139 | 127148 | 20 % | 0 % | 20 % | 60 % | 159046259 |
75 | NC_009955 | AACCG | 2 | 10 | 128788 | 128797 | 40 % | 0 % | 20 % | 40 % | 159046261 |
76 | NC_009955 | GCCGC | 2 | 10 | 129431 | 129440 | 0 % | 0 % | 40 % | 60 % | 159046262 |
77 | NC_009955 | TGGCG | 2 | 10 | 133100 | 133109 | 0 % | 20 % | 60 % | 20 % | 159046265 |
78 | NC_009955 | CGTGA | 2 | 10 | 134598 | 134607 | 20 % | 20 % | 40 % | 20 % | 159046267 |
79 | NC_009955 | GAACA | 2 | 10 | 135715 | 135724 | 60 % | 0 % | 20 % | 20 % | 159046268 |
80 | NC_009955 | CTCGG | 2 | 10 | 137374 | 137383 | 0 % | 20 % | 40 % | 40 % | 159046270 |
81 | NC_009955 | CATCG | 2 | 10 | 140081 | 140090 | 20 % | 20 % | 20 % | 40 % | 159046273 |
82 | NC_009955 | CGCGG | 2 | 10 | 140429 | 140438 | 0 % | 0 % | 60 % | 40 % | 159046273 |
83 | NC_009955 | ATGCC | 2 | 10 | 143036 | 143045 | 20 % | 20 % | 20 % | 40 % | 159046275 |
84 | NC_009955 | TCGAC | 2 | 10 | 143206 | 143215 | 20 % | 20 % | 20 % | 40 % | 159046275 |
85 | NC_009955 | GCCGC | 2 | 10 | 144955 | 144964 | 0 % | 0 % | 40 % | 60 % | 159046277 |
86 | NC_009955 | GGCCG | 2 | 10 | 145657 | 145666 | 0 % | 0 % | 60 % | 40 % | 159046278 |
87 | NC_009955 | GGCTG | 2 | 10 | 145763 | 145772 | 0 % | 20 % | 60 % | 20 % | 159046278 |
88 | NC_009955 | GCCCT | 2 | 10 | 147307 | 147316 | 0 % | 20 % | 20 % | 60 % | 159046280 |
89 | NC_009955 | TGGCT | 2 | 10 | 150808 | 150817 | 0 % | 40 % | 40 % | 20 % | 159046283 |
90 | NC_009955 | GCCAG | 2 | 10 | 152687 | 152696 | 20 % | 0 % | 40 % | 40 % | 159046284 |
91 | NC_009955 | CAAGT | 2 | 10 | 153977 | 153986 | 40 % | 20 % | 20 % | 20 % | 159046286 |
92 | NC_009955 | CAGGC | 2 | 10 | 154682 | 154691 | 20 % | 0 % | 40 % | 40 % | 159046286 |
93 | NC_009955 | AACGT | 2 | 10 | 156695 | 156704 | 40 % | 20 % | 20 % | 20 % | 159046290 |
94 | NC_009955 | CGCGC | 2 | 10 | 158611 | 158620 | 0 % | 0 % | 40 % | 60 % | 159046291 |
95 | NC_009955 | CGGTG | 2 | 10 | 158649 | 158658 | 0 % | 20 % | 60 % | 20 % | 159046291 |
96 | NC_009955 | GCTGT | 2 | 10 | 158799 | 158808 | 0 % | 40 % | 40 % | 20 % | 159046292 |
97 | NC_009955 | GACCG | 2 | 10 | 159158 | 159167 | 20 % | 0 % | 40 % | 40 % | 159046292 |
98 | NC_009955 | CATGG | 2 | 10 | 159705 | 159714 | 20 % | 20 % | 40 % | 20 % | 159046294 |
99 | NC_009955 | CCAGC | 2 | 10 | 160392 | 160401 | 20 % | 0 % | 20 % | 60 % | 159046294 |
100 | NC_009955 | GGTCA | 2 | 10 | 162088 | 162097 | 20 % | 20 % | 40 % | 20 % | 159046297 |
101 | NC_009955 | CGTGC | 2 | 10 | 164441 | 164450 | 0 % | 20 % | 40 % | 40 % | 159046300 |
102 | NC_009955 | GGGCT | 2 | 10 | 167071 | 167080 | 0 % | 20 % | 60 % | 20 % | 159046305 |
103 | NC_009955 | ACATG | 2 | 10 | 167445 | 167454 | 40 % | 20 % | 20 % | 20 % | 159046305 |
104 | NC_009955 | TCGCG | 2 | 10 | 168794 | 168803 | 0 % | 20 % | 40 % | 40 % | 159046307 |
105 | NC_009955 | GCCGA | 2 | 10 | 169617 | 169626 | 20 % | 0 % | 40 % | 40 % | 159046308 |
106 | NC_009955 | CGGAT | 2 | 10 | 171491 | 171500 | 20 % | 20 % | 40 % | 20 % | 159046311 |
107 | NC_009955 | TGACC | 2 | 10 | 171786 | 171795 | 20 % | 20 % | 20 % | 40 % | 159046311 |
108 | NC_009955 | ATCAG | 2 | 10 | 171836 | 171845 | 40 % | 20 % | 20 % | 20 % | 159046311 |
109 | NC_009955 | CATCG | 2 | 10 | 172823 | 172832 | 20 % | 20 % | 20 % | 40 % | 159046312 |
110 | NC_009955 | CTGGG | 2 | 10 | 174420 | 174429 | 0 % | 20 % | 60 % | 20 % | 159046314 |
111 | NC_009955 | GCGCC | 2 | 10 | 175674 | 175683 | 0 % | 0 % | 40 % | 60 % | 159046314 |
112 | NC_009955 | ATCCG | 2 | 10 | 177203 | 177212 | 20 % | 20 % | 20 % | 40 % | 159046317 |
113 | NC_009955 | AGGGC | 2 | 10 | 178647 | 178656 | 20 % | 0 % | 60 % | 20 % | 159046318 |
114 | NC_009955 | CCACG | 2 | 10 | 178695 | 178704 | 20 % | 0 % | 20 % | 60 % | 159046318 |
115 | NC_009955 | CAAAG | 2 | 10 | 178711 | 178720 | 60 % | 0 % | 20 % | 20 % | 159046318 |
116 | NC_009955 | AACCG | 2 | 10 | 179040 | 179049 | 40 % | 0 % | 20 % | 40 % | 159046318 |
117 | NC_009955 | CAGCC | 2 | 10 | 179554 | 179563 | 20 % | 0 % | 20 % | 60 % | 159046318 |
118 | NC_009955 | CGATC | 2 | 10 | 181543 | 181552 | 20 % | 20 % | 20 % | 40 % | 159046321 |
119 | NC_009955 | GCAGT | 2 | 10 | 182912 | 182921 | 20 % | 20 % | 40 % | 20 % | 159046323 |
120 | NC_009955 | CATGG | 2 | 10 | 183097 | 183106 | 20 % | 20 % | 40 % | 20 % | 159046323 |
121 | NC_009955 | ACCGA | 2 | 10 | 183358 | 183367 | 40 % | 0 % | 20 % | 40 % | 159046323 |
122 | NC_009955 | TGACC | 2 | 10 | 184399 | 184408 | 20 % | 20 % | 20 % | 40 % | 159046324 |
123 | NC_009955 | CGGGA | 2 | 10 | 188215 | 188224 | 20 % | 0 % | 60 % | 20 % | 159046328 |