MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Dinoroseobacter shibae DFL 12 chromosome

Total Repeats: 147

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009952	GGGTCG	2	12	11530	11541	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
2	NC_009952	CGGGCG	2	12	12703	12714	0 %	0 %	66.67 %	33.33 %	Non-Coding
3	NC_009952	CGGGTT	2	12	24801	24812	0 %	33.33 %	50 %	16.67 %	Non-Coding
4	NC_009952	GGCGTG	2	12	81247	81258	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
5	NC_009952	GGCAGG	2	12	85141	85152	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
6	NC_009952	GGATGG	2	12	91877	91888	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
7	NC_009952	AAAGGG	2	12	102912	102923	50 %	0 %	50 %	0 %	Non-Coding
8	NC_009952	GGCCCG	2	12	114456	114467	0 %	0 %	50 %	50 %	Non-Coding
9	NC_009952	TTAACC	2	12	157342	157353	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
10	NC_009952	CAGCGA	2	12	259619	259630	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
11	NC_009952	TCTCAA	2	12	278935	278946	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12	NC_009952	CTGCGT	2	12	282231	282242	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
13	NC_009952	TCGGTG	2	12	285190	285201	0 %	33.33 %	50 %	16.67 %	Non-Coding
14	NC_009952	TCCGGT	2	12	289417	289428	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
15	NC_009952	CGCTCG	2	12	300131	300142	0 %	16.67 %	33.33 %	50 %	Non-Coding
16	NC_009952	GGCCCC	2	12	310776	310787	0 %	0 %	33.33 %	66.67 %	Non-Coding
17	NC_009952	CGGGTC	2	12	334031	334042	0 %	16.67 %	50 %	33.33 %	Non-Coding
18	NC_009952	ATCCGG	2	12	378232	378243	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
19	NC_009952	TGCACA	2	12	416578	416589	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
20	NC_009952	CGTTTC	2	12	416897	416908	0 %	50 %	16.67 %	33.33 %	Non-Coding
21	NC_009952	AAGCGC	2	12	417739	417750	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
22	NC_009952	CCTGCG	2	12	418083	418094	0 %	16.67 %	33.33 %	50 %	Non-Coding
23	NC_009952	GAGGTG	2	12	418198	418209	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
24	NC_009952	GCGCCT	2	12	418311	418322	0 %	16.67 %	33.33 %	50 %	Non-Coding
25	NC_009952	GCGCCT	2	12	543922	543933	0 %	16.67 %	33.33 %	50 %	Non-Coding
26	NC_009952	AGCATG	2	12	558387	558398	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
27	NC_009952	GGGGGA	2	12	595951	595962	16.67 %	0 %	83.33 %	0 %	Non-Coding
28	NC_009952	ATCCGG	2	12	621997	622008	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
29	NC_009952	CTTGCG	2	12	769852	769863	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
30	NC_009952	GGAGGG	2	12	776188	776199	16.67 %	0 %	83.33 %	0 %	Non-Coding
31	NC_009952	TTGACG	2	12	851906	851917	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
32	NC_009952	GACATC	2	12	984641	984652	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
33	NC_009952	CGAAGG	2	12	986113	986124	33.33 %	0 %	50 %	16.67 %	Non-Coding
34	NC_009952	CCGAGG	2	12	986982	986993	16.67 %	0 %	50 %	33.33 %	Non-Coding
35	NC_009952	GGCGAT	2	12	988852	988863	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
36	NC_009952	CGGACA	2	12	1002810	1002821	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
37	NC_009952	GCTTGC	2	12	1022035	1022046	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
38	NC_009952	GCCCGC	2	12	1062487	1062498	0 %	0 %	33.33 %	66.67 %	Non-Coding
39	NC_009952	CGGGAG	2	12	1098926	1098937	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
40	NC_009952	GTGCGG	2	12	1104380	1104391	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
41	NC_009952	GCCGAT	2	12	1157693	1157704	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
42	NC_009952	GGCGCG	2	12	1164909	1164920	0 %	0 %	66.67 %	33.33 %	Non-Coding
43	NC_009952	GGGATG	2	12	1187007	1187018	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
44	NC_009952	CTCAGC	2	12	1248952	1248963	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
45	NC_009952	CTTGTG	2	12	1324066	1324077	0 %	50 %	33.33 %	16.67 %	Non-Coding
46	NC_009952	CGCCTG	2	12	1341259	1341270	0 %	16.67 %	33.33 %	50 %	Non-Coding
47	NC_009952	GCCGGG	2	12	1372104	1372115	0 %	0 %	66.67 %	33.33 %	Non-Coding
48	NC_009952	CGTAGC	2	12	1505932	1505943	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
49	NC_009952	CCGATC	2	12	1536233	1536244	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
50	NC_009952	CCTTGT	2	12	1538797	1538808	0 %	50 %	16.67 %	33.33 %	Non-Coding
51	NC_009952	TAGGGC	2	12	1612839	1612850	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
52	NC_009952	CGTCTT	2	12	1626170	1626181	0 %	50 %	16.67 %	33.33 %	Non-Coding
53	NC_009952	GACCCC	2	12	1628074	1628085	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
54	NC_009952	CTGATC	2	12	1673336	1673347	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
55	NC_009952	CTGAGC	2	12	1711950	1711961	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
56	NC_009952	ACCGCG	2	12	1713270	1713281	16.67 %	0 %	33.33 %	50 %	Non-Coding
57	NC_009952	AAATCA	2	12	1718729	1718740	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
58	NC_009952	TCACAA	2	12	1754724	1754735	50 %	16.67 %	0 %	33.33 %	Non-Coding
59	NC_009952	CGGGCG	2	12	1760550	1760561	0 %	0 %	66.67 %	33.33 %	Non-Coding
60	NC_009952	GCAGAT	2	12	1768614	1768625	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
61	NC_009952	ACGCAA	2	12	1810050	1810061	50 %	0 %	16.67 %	33.33 %	Non-Coding
62	NC_009952	GCGGGC	2	12	1904694	1904705	0 %	0 %	66.67 %	33.33 %	Non-Coding
63	NC_009952	CTGGTA	2	12	1952702	1952713	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
64	NC_009952	CGGCAT	2	12	1982729	1982740	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
65	NC_009952	GCAAAA	2	12	2004871	2004882	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
66	NC_009952	GCCCGC	2	12	2018080	2018091	0 %	0 %	33.33 %	66.67 %	Non-Coding
67	NC_009952	CAAGGT	2	12	2031216	2031227	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
68	NC_009952	GGATCG	2	12	2090737	2090748	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
69	NC_009952	ACCGAC	2	12	2090927	2090938	33.33 %	0 %	16.67 %	50 %	Non-Coding
70	NC_009952	GACCGG	2	12	2114441	2114452	16.67 %	0 %	50 %	33.33 %	Non-Coding
71	NC_009952	GGCGCA	2	12	2119337	2119348	16.67 %	0 %	50 %	33.33 %	Non-Coding
72	NC_009952	GGACCG	2	12	2123573	2123584	16.67 %	0 %	50 %	33.33 %	Non-Coding
73	NC_009952	GATACT	2	12	2128622	2128633	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
74	NC_009952	TCGGGG	2	12	2151832	2151843	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
75	NC_009952	GCCCGG	2	12	2185822	2185833	0 %	0 %	50 %	50 %	Non-Coding
76	NC_009952	CGACCC	2	12	2201465	2201476	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
77	NC_009952	CCTTTC	2	12	2209242	2209253	0 %	50 %	0 %	50 %	Non-Coding
78	NC_009952	CCCCCT	2	12	2212544	2212555	0 %	16.67 %	0 %	83.33 %	Non-Coding
79	NC_009952	TCTTGC	2	12	2231468	2231479	0 %	50 %	16.67 %	33.33 %	Non-Coding
80	NC_009952	CGTCGG	2	12	2233899	2233910	0 %	16.67 %	50 %	33.33 %	Non-Coding
81	NC_009952	AAATCG	2	12	2301270	2301281	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
82	NC_009952	GGCCGG	2	12	2326517	2326528	0 %	0 %	66.67 %	33.33 %	Non-Coding
83	NC_009952	TGGGTC	2	12	2381022	2381033	0 %	33.33 %	50 %	16.67 %	Non-Coding
84	NC_009952	GTCTTC	2	12	2409491	2409502	0 %	50 %	16.67 %	33.33 %	Non-Coding
85	NC_009952	CCGCAA	2	12	2497962	2497973	33.33 %	0 %	16.67 %	50 %	Non-Coding
86	NC_009952	TCTGGC	2	12	2503486	2503497	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
87	NC_009952	CGGTCA	2	12	2546544	2546555	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
88	NC_009952	CGCCCC	2	12	2633288	2633299	0 %	0 %	16.67 %	83.33 %	Non-Coding
89	NC_009952	GAGGGC	2	12	2671747	2671758	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
90	NC_009952	ACCCGA	2	12	2697626	2697637	33.33 %	0 %	16.67 %	50 %	Non-Coding
91	NC_009952	TGCAGA	2	12	2767795	2767806	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
92	NC_009952	CGGCCA	2	12	2797848	2797859	16.67 %	0 %	33.33 %	50 %	Non-Coding
93	NC_009952	CCCCGG	2	12	2798811	2798822	0 %	0 %	33.33 %	66.67 %	Non-Coding
94	NC_009952	CCCGCC	2	12	2807632	2807643	0 %	0 %	16.67 %	83.33 %	Non-Coding
95	NC_009952	CGCAGG	2	12	2845484	2845495	16.67 %	0 %	50 %	33.33 %	Non-Coding
96	NC_009952	GCCCCC	2	12	2846808	2846819	0 %	0 %	16.67 %	83.33 %	Non-Coding
97	NC_009952	CCCGCG	2	12	2848112	2848123	0 %	0 %	33.33 %	66.67 %	Non-Coding
98	NC_009952	AAGATG	2	12	2888777	2888788	50 %	16.67 %	33.33 %	0 %	Non-Coding
99	NC_009952	GCCGAG	2	12	2912279	2912290	16.67 %	0 %	50 %	33.33 %	Non-Coding
100	NC_009952	GGACAA	2	12	3044738	3044749	50 %	0 %	33.33 %	16.67 %	Non-Coding
101	NC_009952	CATCTT	2	12	3108700	3108711	16.67 %	50 %	0 %	33.33 %	Non-Coding
102	NC_009952	CGCGCC	2	12	3149190	3149201	0 %	0 %	33.33 %	66.67 %	Non-Coding
103	NC_009952	CGCCCG	2	12	3155717	3155728	0 %	0 %	33.33 %	66.67 %	Non-Coding
104	NC_009952	CCCCGG	2	12	3179740	3179751	0 %	0 %	33.33 %	66.67 %	Non-Coding
105	NC_009952	CCGCGA	2	12	3277343	3277354	16.67 %	0 %	33.33 %	50 %	Non-Coding
106	NC_009952	ACCGTT	2	12	3322411	3322422	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
107	NC_009952	CCCCCG	2	12	3390223	3390234	0 %	0 %	16.67 %	83.33 %	Non-Coding
108	NC_009952	CCCCCG	2	12	3390284	3390295	0 %	0 %	16.67 %	83.33 %	Non-Coding
109	NC_009952	CCCCCG	2	12	3390345	3390356	0 %	0 %	16.67 %	83.33 %	Non-Coding
110	NC_009952	CCCCCG	2	12	3390406	3390417	0 %	0 %	16.67 %	83.33 %	Non-Coding
111	NC_009952	CCCCCG	2	12	3390467	3390478	0 %	0 %	16.67 %	83.33 %	Non-Coding
112	NC_009952	CCCCCG	2	12	3390528	3390539	0 %	0 %	16.67 %	83.33 %	Non-Coding
113	NC_009952	CCCCCG	2	12	3390589	3390600	0 %	0 %	16.67 %	83.33 %	Non-Coding
114	NC_009952	CCCCCG	2	12	3390650	3390661	0 %	0 %	16.67 %	83.33 %	Non-Coding
115	NC_009952	CCCCCG	2	12	3390711	3390722	0 %	0 %	16.67 %	83.33 %	Non-Coding
116	NC_009952	CCCCCG	2	12	3390772	3390783	0 %	0 %	16.67 %	83.33 %	Non-Coding
117	NC_009952	CCCCCG	2	12	3390833	3390844	0 %	0 %	16.67 %	83.33 %	Non-Coding
118	NC_009952	CCCCCG	2	12	3390894	3390905	0 %	0 %	16.67 %	83.33 %	Non-Coding
119	NC_009952	CCCCCG	2	12	3390955	3390966	0 %	0 %	16.67 %	83.33 %	Non-Coding
120	NC_009952	CCCCCG	2	12	3391016	3391027	0 %	0 %	16.67 %	83.33 %	Non-Coding
121	NC_009952	CCCCCG	2	12	3391077	3391088	0 %	0 %	16.67 %	83.33 %	Non-Coding
122	NC_009952	CCCCCG	2	12	3391138	3391149	0 %	0 %	16.67 %	83.33 %	Non-Coding
123	NC_009952	CCCCCG	2	12	3391198	3391209	0 %	0 %	16.67 %	83.33 %	Non-Coding
124	NC_009952	CCCCCG	2	12	3391259	3391270	0 %	0 %	16.67 %	83.33 %	Non-Coding
125	NC_009952	CCCCCG	2	12	3391320	3391331	0 %	0 %	16.67 %	83.33 %	Non-Coding
126	NC_009952	CCCCCG	2	12	3391381	3391392	0 %	0 %	16.67 %	83.33 %	Non-Coding
127	NC_009952	CCCCCG	2	12	3391442	3391453	0 %	0 %	16.67 %	83.33 %	Non-Coding
128	NC_009952	CCCCCG	2	12	3391503	3391514	0 %	0 %	16.67 %	83.33 %	Non-Coding
129	NC_009952	CCCCCG	2	12	3391564	3391575	0 %	0 %	16.67 %	83.33 %	Non-Coding
130	NC_009952	CCCCCG	2	12	3391625	3391636	0 %	0 %	16.67 %	83.33 %	Non-Coding
131	NC_009952	CCCCCG	2	12	3391686	3391697	0 %	0 %	16.67 %	83.33 %	Non-Coding
132	NC_009952	CCCCCG	2	12	3391747	3391758	0 %	0 %	16.67 %	83.33 %	Non-Coding
133	NC_009952	CCCCCG	2	12	3391808	3391819	0 %	0 %	16.67 %	83.33 %	Non-Coding
134	NC_009952	CCCCCG	2	12	3391869	3391880	0 %	0 %	16.67 %	83.33 %	Non-Coding
135	NC_009952	CCCCCG	2	12	3391930	3391941	0 %	0 %	16.67 %	83.33 %	Non-Coding
136	NC_009952	CCCCCG	2	12	3391991	3392002	0 %	0 %	16.67 %	83.33 %	Non-Coding
137	NC_009952	CCCCCG	2	12	3392052	3392063	0 %	0 %	16.67 %	83.33 %	Non-Coding
138	NC_009952	CCCCCG	2	12	3392113	3392124	0 %	0 %	16.67 %	83.33 %	Non-Coding
139	NC_009952	CCCCCG	2	12	3392174	3392185	0 %	0 %	16.67 %	83.33 %	Non-Coding
140	NC_009952	CATCTT	3	18	3399537	3399554	16.67 %	50 %	0 %	33.33 %	Non-Coding
141	NC_009952	CCCGCG	2	12	3479517	3479528	0 %	0 %	33.33 %	66.67 %	Non-Coding
142	NC_009952	GCGGCA	2	12	3495609	3495620	16.67 %	0 %	50 %	33.33 %	Non-Coding
143	NC_009952	CTGGGC	2	12	3529670	3529681	0 %	16.67 %	50 %	33.33 %	Non-Coding
144	NC_009952	TTTCTC	2	12	3535638	3535649	0 %	66.67 %	0 %	33.33 %	Non-Coding
145	NC_009952	AGGCAC	2	12	3570911	3570922	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
146	NC_009952	GTTTTG	2	12	3606131	3606142	0 %	66.67 %	33.33 %	0 %	Non-Coding
147	NC_009952	CTCAAG	2	12	3706923	3706934	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.