Hexa-nucleotide Repeats of Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM
Total Repeats: 68
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_009837 | TCATTG | 2 | 12 | 1762 | 1773 | 16.67 % | 50 % | 16.67 % | 16.67 % | 229776985 |
2 | NC_009837 | AGTAAT | 2 | 12 | 1965 | 1976 | 50 % | 33.33 % | 16.67 % | 0 % | 229776985 |
3 | NC_009837 | GTGATG | 2 | 12 | 6148 | 6159 | 16.67 % | 33.33 % | 50 % | 0 % | 157418091 |
4 | NC_009837 | TCCTCT | 2 | 12 | 6669 | 6680 | 0 % | 50 % | 0 % | 50 % | 157418092 |
5 | NC_009837 | TCAGCA | 2 | 12 | 8588 | 8599 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 157418094 |
6 | NC_009837 | GGCAGA | 2 | 12 | 8993 | 9004 | 33.33 % | 0 % | 50 % | 16.67 % | 157418094 |
7 | NC_009837 | CTGCTA | 7 | 42 | 9898 | 9939 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
8 | NC_009837 | ACTCAG | 2 | 12 | 10960 | 10971 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 157418097 |
9 | NC_009837 | TCAGCC | 2 | 12 | 10998 | 11009 | 16.67 % | 16.67 % | 16.67 % | 50 % | 157418097 |
10 | NC_009837 | GGCGCT | 2 | 12 | 12077 | 12088 | 0 % | 16.67 % | 50 % | 33.33 % | 157418099 |
11 | NC_009837 | CAGGTG | 2 | 12 | 12108 | 12119 | 16.67 % | 16.67 % | 50 % | 16.67 % | 157418099 |
12 | NC_009837 | GCCGGA | 2 | 12 | 12449 | 12460 | 16.67 % | 0 % | 50 % | 33.33 % | 157418099 |
13 | NC_009837 | CACTGG | 2 | 12 | 13843 | 13854 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 157418100 |
14 | NC_009837 | TGGCAG | 2 | 12 | 14519 | 14530 | 16.67 % | 16.67 % | 50 % | 16.67 % | 157418101 |
15 | NC_009837 | TTGAAA | 2 | 12 | 18945 | 18956 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
16 | NC_009837 | TGGAAA | 2 | 12 | 26247 | 26258 | 50 % | 16.67 % | 33.33 % | 0 % | 157418122 |
17 | NC_009837 | GTCAAC | 2 | 12 | 35233 | 35244 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 157418133 |
18 | NC_009837 | TCTGTT | 2 | 12 | 35492 | 35503 | 0 % | 66.67 % | 16.67 % | 16.67 % | 157418134 |
19 | NC_009837 | AAATAA | 2 | 12 | 35618 | 35629 | 83.33 % | 16.67 % | 0 % | 0 % | 157418134 |
20 | NC_009837 | GGCAGG | 2 | 12 | 36131 | 36142 | 16.67 % | 0 % | 66.67 % | 16.67 % | 157418136 |
21 | NC_009837 | ACAGTT | 2 | 12 | 38126 | 38137 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 157418136 |
22 | NC_009837 | ATGTGG | 2 | 12 | 47313 | 47324 | 16.67 % | 33.33 % | 50 % | 0 % | 157418141 |
23 | NC_009837 | TGGGGC | 2 | 12 | 47619 | 47630 | 0 % | 16.67 % | 66.67 % | 16.67 % | 157418141 |
24 | NC_009837 | AATCCG | 2 | 12 | 54708 | 54719 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 229776983 |
25 | NC_009837 | TGGTGA | 2 | 12 | 59176 | 59187 | 16.67 % | 33.33 % | 50 % | 0 % | 157418156 |
26 | NC_009837 | TTGGTC | 2 | 12 | 60909 | 60920 | 0 % | 50 % | 33.33 % | 16.67 % | 157418156 |
27 | NC_009837 | AGGGGA | 2 | 12 | 61468 | 61479 | 33.33 % | 0 % | 66.67 % | 0 % | 157418156 |
28 | NC_009837 | GTAACT | 2 | 12 | 65089 | 65100 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 157418160 |
29 | NC_009837 | CCCGTG | 2 | 12 | 66378 | 66389 | 0 % | 16.67 % | 33.33 % | 50 % | 157418161 |
30 | NC_009837 | CGGGAA | 2 | 12 | 74066 | 74077 | 33.33 % | 0 % | 50 % | 16.67 % | 157418168 |
31 | NC_009837 | GCACCT | 2 | 12 | 79365 | 79376 | 16.67 % | 16.67 % | 16.67 % | 50 % | 157418176 |
32 | NC_009837 | GAAGAC | 2 | 12 | 79646 | 79657 | 50 % | 0 % | 33.33 % | 16.67 % | 157418176 |
33 | NC_009837 | AATGGT | 2 | 12 | 82020 | 82031 | 33.33 % | 33.33 % | 33.33 % | 0 % | 157418179 |
34 | NC_009837 | TATTTA | 2 | 12 | 83487 | 83498 | 33.33 % | 66.67 % | 0 % | 0 % | 157418179 |
35 | NC_009837 | GACAGG | 2 | 12 | 84523 | 84534 | 33.33 % | 0 % | 50 % | 16.67 % | 157418179 |
36 | NC_009837 | TCATAA | 2 | 12 | 84740 | 84751 | 50 % | 33.33 % | 0 % | 16.67 % | 157418179 |
37 | NC_009837 | GCAGAA | 2 | 12 | 86711 | 86722 | 50 % | 0 % | 33.33 % | 16.67 % | 157418181 |
38 | NC_009837 | CGCCAG | 2 | 12 | 87532 | 87543 | 16.67 % | 0 % | 33.33 % | 50 % | 157418182 |
39 | NC_009837 | CCGGTT | 2 | 12 | 93586 | 93597 | 0 % | 33.33 % | 33.33 % | 33.33 % | 157418190 |
40 | NC_009837 | CGGGCT | 2 | 12 | 96707 | 96718 | 0 % | 16.67 % | 50 % | 33.33 % | 157418193 |
41 | NC_009837 | ACTGGA | 2 | 12 | 96888 | 96899 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 157418193 |
42 | NC_009837 | GCGCTG | 2 | 12 | 99764 | 99775 | 0 % | 16.67 % | 50 % | 33.33 % | 157418199 |
43 | NC_009837 | GATGGT | 2 | 12 | 101680 | 101691 | 16.67 % | 33.33 % | 50 % | 0 % | 157418201 |
44 | NC_009837 | ATAGAT | 2 | 12 | 102993 | 103004 | 50 % | 33.33 % | 16.67 % | 0 % | 157418202 |
45 | NC_009837 | CAATAA | 2 | 12 | 110729 | 110740 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
46 | NC_009837 | ATTATC | 2 | 12 | 111624 | 111635 | 33.33 % | 50 % | 0 % | 16.67 % | 157418217 |
47 | NC_009837 | TTAATT | 2 | 12 | 113890 | 113901 | 33.33 % | 66.67 % | 0 % | 0 % | 157418221 |
48 | NC_009837 | TCAAAG | 2 | 12 | 114980 | 114991 | 50 % | 16.67 % | 16.67 % | 16.67 % | 157418221 |
49 | NC_009837 | GTTCAT | 2 | 12 | 117326 | 117337 | 16.67 % | 50 % | 16.67 % | 16.67 % | 157418223 |
50 | NC_009837 | CAGTGT | 2 | 12 | 117777 | 117788 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 157418223 |
51 | NC_009837 | TCCAGT | 2 | 12 | 120800 | 120811 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 157418224 |
52 | NC_009837 | ATGGGC | 2 | 12 | 130428 | 130439 | 16.67 % | 16.67 % | 50 % | 16.67 % | 157418235 |
53 | NC_009837 | CTGACT | 2 | 12 | 130975 | 130986 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 157418236 |
54 | NC_009837 | GAACCG | 2 | 12 | 135496 | 135507 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
55 | NC_009837 | CATATC | 2 | 12 | 136290 | 136301 | 33.33 % | 33.33 % | 0 % | 33.33 % | 157418244 |
56 | NC_009837 | TCAATT | 2 | 12 | 136532 | 136543 | 33.33 % | 50 % | 0 % | 16.67 % | 157418244 |
57 | NC_009837 | ATGATT | 2 | 12 | 141056 | 141067 | 33.33 % | 50 % | 16.67 % | 0 % | 157418251 |
58 | NC_009837 | CTGCCA | 2 | 12 | 146067 | 146078 | 16.67 % | 16.67 % | 16.67 % | 50 % | 157418254 |
59 | NC_009837 | CGGCAG | 2 | 12 | 146088 | 146099 | 16.67 % | 0 % | 50 % | 33.33 % | 157418254 |
60 | NC_009837 | TGACAC | 2 | 12 | 159205 | 159216 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 157418270 |
61 | NC_009837 | TGGATA | 2 | 12 | 159403 | 159414 | 33.33 % | 33.33 % | 33.33 % | 0 % | 157418270 |
62 | NC_009837 | AATATT | 2 | 12 | 161649 | 161660 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
63 | NC_009837 | ACATTC | 2 | 12 | 163614 | 163625 | 33.33 % | 33.33 % | 0 % | 33.33 % | 157418273 |
64 | NC_009837 | GCAGAA | 2 | 12 | 168124 | 168135 | 50 % | 0 % | 33.33 % | 16.67 % | 157418278 |
65 | NC_009837 | CAGATT | 2 | 12 | 168256 | 168267 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
66 | NC_009837 | TGATTA | 2 | 12 | 169532 | 169543 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
67 | NC_009837 | GACTGG | 2 | 12 | 171209 | 171220 | 16.67 % | 16.67 % | 50 % | 16.67 % | 157418281 |
68 | NC_009837 | ATAGCT | 2 | 12 | 172981 | 172992 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 157418282 |