MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Vibrio harveyi ATCC BAA-1116 chromosome II

Total Repeats: 85

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009784	TTTACA	2	12	5727	5738	33.33 %	50 %	0 %	16.67 %	Non-Coding
2	NC_009784	ATTTCT	2	12	34395	34406	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
3	NC_009784	TAGTTT	2	12	105925	105936	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
4	NC_009784	TCATTA	2	12	133378	133389	33.33 %	50 %	0 %	16.67 %	Non-Coding
5	NC_009784	TAACTG	2	12	139652	139663	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
6	NC_009784	CTTTTT	2	12	152953	152964	0 %	83.33 %	0 %	16.67 %	Non-Coding
7	NC_009784	TTTTGT	2	12	272541	272552	0 %	83.33 %	16.67 %	0 %	Non-Coding
8	NC_009784	ATAAAA	2	12	318494	318505	83.33 %	16.67 %	0 %	0 %	Non-Coding
9	NC_009784	CTGGCA	2	12	324542	324553	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
10	NC_009784	TATGAA	2	12	330458	330469	50 %	33.33 %	16.67 %	0 %	Non-Coding
11	NC_009784	TTACTG	2	12	332141	332152	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
12	NC_009784	ACTTTT	2	12	341469	341480	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
13	NC_009784	TTCGTT	2	12	357151	357162	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
14	NC_009784	AATTAA	2	12	397862	397873	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_009784	TAGATG	2	12	423598	423609	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
16	NC_009784	TTTTTA	2	12	428376	428387	16.67 %	83.33 %	0 %	0 %	Non-Coding
17	NC_009784	TTTTCT	2	12	428405	428416	0 %	83.33 %	0 %	16.67 %	Non-Coding
18	NC_009784	AATAGT	2	12	446799	446810	50 %	33.33 %	16.67 %	0 %	Non-Coding
19	NC_009784	AAAAAT	2	12	503965	503976	83.33 %	16.67 %	0 %	0 %	Non-Coding
20	NC_009784	AAATAA	3	18	534917	534934	83.33 %	16.67 %	0 %	0 %	Non-Coding
21	NC_009784	AAACTT	2	12	586648	586659	50 %	33.33 %	0 %	16.67 %	Non-Coding
22	NC_009784	GTATTT	2	12	587896	587907	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
23	NC_009784	GCGAAA	2	12	621614	621625	50 %	0 %	33.33 %	16.67 %	Non-Coding
24	NC_009784	AAAAGC	2	12	630943	630954	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
25	NC_009784	ATTTTT	2	12	639923	639934	16.67 %	83.33 %	0 %	0 %	Non-Coding
26	NC_009784	TATAAA	2	12	686361	686372	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_009784	TTTACG	2	12	694007	694018	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
28	NC_009784	TTTTAG	2	12	742971	742982	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
29	NC_009784	ACGTAA	2	12	753443	753454	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
30	NC_009784	TGAGGT	2	12	762333	762344	16.67 %	33.33 %	50 %	0 %	Non-Coding
31	NC_009784	CAAAAG	2	12	765296	765307	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
32	NC_009784	TTATTT	2	12	809586	809597	16.67 %	83.33 %	0 %	0 %	Non-Coding
33	NC_009784	TATGCA	2	12	871994	872005	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
34	NC_009784	CTCAGA	2	12	921061	921072	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
35	NC_009784	TCAGTG	2	12	925061	925072	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
36	NC_009784	TTTTCT	2	12	927837	927848	0 %	83.33 %	0 %	16.67 %	Non-Coding
37	NC_009784	GGAAGC	2	12	933486	933497	33.33 %	0 %	50 %	16.67 %	Non-Coding
38	NC_009784	CGTTTT	2	12	1008729	1008740	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
39	NC_009784	TTGGAA	2	12	1041025	1041036	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
40	NC_009784	ATTACA	2	12	1075063	1075074	50 %	33.33 %	0 %	16.67 %	Non-Coding
41	NC_009784	GGCTCT	2	12	1089488	1089499	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
42	NC_009784	CCATAG	2	12	1122887	1122898	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
43	NC_009784	AAGGGA	2	12	1129519	1129530	50 %	0 %	50 %	0 %	Non-Coding
44	NC_009784	GGAGAA	2	12	1205139	1205150	50 %	0 %	50 %	0 %	Non-Coding
45	NC_009784	TAAAAA	2	12	1207510	1207521	83.33 %	16.67 %	0 %	0 %	Non-Coding
46	NC_009784	TCGAGT	2	12	1226398	1226409	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
47	NC_009784	ACCTTA	2	12	1241872	1241883	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
48	NC_009784	AATATG	2	12	1245152	1245163	50 %	33.33 %	16.67 %	0 %	Non-Coding
49	NC_009784	AAAAAC	2	12	1361920	1361931	83.33 %	0 %	0 %	16.67 %	Non-Coding
50	NC_009784	TAAATG	2	12	1383618	1383629	50 %	33.33 %	16.67 %	0 %	Non-Coding
51	NC_009784	TTTGAA	2	12	1426223	1426234	33.33 %	50 %	16.67 %	0 %	Non-Coding
52	NC_009784	TCTAGT	2	12	1439372	1439383	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
53	NC_009784	TAAAAC	2	12	1442390	1442401	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
54	NC_009784	TACTTC	2	12	1445064	1445075	16.67 %	50 %	0 %	33.33 %	Non-Coding
55	NC_009784	AAAAGC	2	12	1495973	1495984	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
56	NC_009784	TTTCTT	2	12	1500335	1500346	0 %	83.33 %	0 %	16.67 %	Non-Coding
57	NC_009784	GAATAG	3	18	1575182	1575199	50 %	16.67 %	33.33 %	0 %	Non-Coding
58	NC_009784	TCACTT	2	12	1633141	1633152	16.67 %	50 %	0 %	33.33 %	Non-Coding
59	NC_009784	AATAAA	2	12	1633858	1633869	83.33 %	16.67 %	0 %	0 %	Non-Coding
60	NC_009784	AGTATT	2	12	1682346	1682357	33.33 %	50 %	16.67 %	0 %	Non-Coding
61	NC_009784	CGAAAC	2	12	1719444	1719455	50 %	0 %	16.67 %	33.33 %	Non-Coding
62	NC_009784	CTCTCG	2	12	1719588	1719599	0 %	33.33 %	16.67 %	50 %	Non-Coding
63	NC_009784	TAAAAA	2	12	1722463	1722474	83.33 %	16.67 %	0 %	0 %	Non-Coding
64	NC_009784	TTCATC	2	12	1779378	1779389	16.67 %	50 %	0 %	33.33 %	Non-Coding
65	NC_009784	TTCAGT	2	12	1781263	1781274	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
66	NC_009784	ACTTAA	2	12	1793103	1793114	50 %	33.33 %	0 %	16.67 %	Non-Coding
67	NC_009784	ATTGTG	2	12	1837892	1837903	16.67 %	50 %	33.33 %	0 %	Non-Coding
68	NC_009784	TATTGA	2	12	1863891	1863902	33.33 %	50 %	16.67 %	0 %	Non-Coding
69	NC_009784	AAATGT	2	12	1885213	1885224	50 %	33.33 %	16.67 %	0 %	Non-Coding
70	NC_009784	TAGCAA	2	12	1930519	1930530	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
71	NC_009784	AGATTA	2	12	1931983	1931994	50 %	33.33 %	16.67 %	0 %	Non-Coding
72	NC_009784	ATTTCA	2	12	1940489	1940500	33.33 %	50 %	0 %	16.67 %	Non-Coding
73	NC_009784	ATATTT	2	12	1969457	1969468	33.33 %	66.67 %	0 %	0 %	Non-Coding
74	NC_009784	CTTATA	2	12	1974607	1974618	33.33 %	50 %	0 %	16.67 %	Non-Coding
75	NC_009784	CTTTAC	2	12	2023361	2023372	16.67 %	50 %	0 %	33.33 %	Non-Coding
76	NC_009784	ATTTGT	2	12	2042304	2042315	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
77	NC_009784	TACTTC	7	42	2092451	2092492	16.67 %	50 %	0 %	33.33 %	Non-Coding
78	NC_009784	AATATA	2	12	2114399	2114410	66.67 %	33.33 %	0 %	0 %	Non-Coding
79	NC_009784	TGATAA	3	18	2117030	2117047	50 %	33.33 %	16.67 %	0 %	Non-Coding
80	NC_009784	CGCAGT	2	12	2118783	2118794	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
81	NC_009784	CATGAT	2	12	2122182	2122193	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
82	NC_009784	TCAATC	2	12	2155778	2155789	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
83	NC_009784	ATATAA	2	12	2183784	2183795	66.67 %	33.33 %	0 %	0 %	Non-Coding
84	NC_009784	AAACAA	2	12	2189945	2189956	83.33 %	0 %	0 %	16.67 %	Non-Coding
85	NC_009784	CGGTGA	2	12	2202943	2202954	16.67 %	16.67 %	50 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.