MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Vibrio harveyi ATCC BAA-1116 plasmid pVIBHAR

Total Repeats: 185

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009777	GAT	2	6	73	78	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
2	NC_009777	GAT	2	6	115	120	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
3	NC_009777	TGT	2	6	153	158	0 %	66.67 %	33.33 %	0 %	Non-Coding
4	NC_009777	GAC	2	6	177	182	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
5	NC_009777	GCA	2	6	283	288	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6	NC_009777	GTC	2	6	307	312	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7	NC_009777	CTT	2	6	373	378	0 %	66.67 %	0 %	33.33 %	Non-Coding
8	NC_009777	GTC	2	6	389	394	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9	NC_009777	CTT	2	6	411	416	0 %	66.67 %	0 %	33.33 %	Non-Coding
10	NC_009777	TAT	2	6	667	672	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_009777	TAT	2	6	712	717	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_009777	TTC	2	6	1417	1422	0 %	66.67 %	0 %	33.33 %	Non-Coding
13	NC_009777	GGC	2	6	2544	2549	0 %	0 %	66.67 %	33.33 %	Non-Coding
14	NC_009777	TCC	2	6	2774	2779	0 %	33.33 %	0 %	66.67 %	Non-Coding
15	NC_009777	AGA	2	6	2895	2900	66.67 %	0 %	33.33 %	0 %	Non-Coding
16	NC_009777	ACG	2	6	2930	2935	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17	NC_009777	GGC	2	6	3894	3899	0 %	0 %	66.67 %	33.33 %	Non-Coding
18	NC_009777	CGC	2	6	3903	3908	0 %	0 %	33.33 %	66.67 %	Non-Coding
19	NC_009777	GCG	2	6	4078	4083	0 %	0 %	66.67 %	33.33 %	Non-Coding
20	NC_009777	TTG	2	6	4322	4327	0 %	66.67 %	33.33 %	0 %	Non-Coding
21	NC_009777	ATG	2	6	4375	4380	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
22	NC_009777	TGA	2	6	4459	4464	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
23	NC_009777	CAA	2	6	4537	4542	66.67 %	0 %	0 %	33.33 %	Non-Coding
24	NC_009777	AAC	2	6	4625	4630	66.67 %	0 %	0 %	33.33 %	Non-Coding
25	NC_009777	TGG	2	6	4688	4693	0 %	33.33 %	66.67 %	0 %	Non-Coding
26	NC_009777	TCC	2	6	4940	4945	0 %	33.33 %	0 %	66.67 %	Non-Coding
27	NC_009777	AGA	2	6	5061	5066	66.67 %	0 %	33.33 %	0 %	Non-Coding
28	NC_009777	ACG	2	6	5096	5101	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
29	NC_009777	TTC	2	6	5890	5895	0 %	66.67 %	0 %	33.33 %	Non-Coding
30	NC_009777	TGT	2	6	5997	6002	0 %	66.67 %	33.33 %	0 %	Non-Coding
31	NC_009777	CTA	2	6	6006	6011	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_009777	CAC	2	6	6022	6027	33.33 %	0 %	0 %	66.67 %	Non-Coding
33	NC_009777	GGC	2	6	6066	6071	0 %	0 %	66.67 %	33.33 %	Non-Coding
34	NC_009777	AGA	2	6	7968	7973	66.67 %	0 %	33.33 %	0 %	Non-Coding
35	NC_009777	CTA	2	6	11510	11515	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
36	NC_009777	TTC	2	6	11527	11532	0 %	66.67 %	0 %	33.33 %	Non-Coding
37	NC_009777	CGT	2	6	11543	11548	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
38	NC_009777	CCA	2	6	11580	11585	33.33 %	0 %	0 %	66.67 %	Non-Coding
39	NC_009777	TAT	2	6	11655	11660	33.33 %	66.67 %	0 %	0 %	Non-Coding
40	NC_009777	TAG	2	6	11789	11794	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
41	NC_009777	AGC	2	6	12545	12550	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
42	NC_009777	CTC	2	6	12556	12561	0 %	33.33 %	0 %	66.67 %	Non-Coding
43	NC_009777	AAC	2	6	12563	12568	66.67 %	0 %	0 %	33.33 %	Non-Coding
44	NC_009777	TAT	2	6	14459	14464	33.33 %	66.67 %	0 %	0 %	Non-Coding
45	NC_009777	TTC	2	6	15164	15169	0 %	66.67 %	0 %	33.33 %	Non-Coding
46	NC_009777	GTA	2	6	15762	15767	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
47	NC_009777	CAG	2	6	15777	15782	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
48	NC_009777	CGT	2	6	17212	17217	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
49	NC_009777	AAG	2	6	17264	17269	66.67 %	0 %	33.33 %	0 %	Non-Coding
50	NC_009777	CTT	2	6	17300	17305	0 %	66.67 %	0 %	33.33 %	Non-Coding
51	NC_009777	GTA	2	6	18029	18034	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
52	NC_009777	CAG	2	6	18044	18049	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
53	NC_009777	TTC	2	6	18521	18526	0 %	66.67 %	0 %	33.33 %	Non-Coding
54	NC_009777	AGA	2	6	18807	18812	66.67 %	0 %	33.33 %	0 %	Non-Coding
55	NC_009777	ATG	2	6	18820	18825	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
56	NC_009777	TCT	2	6	18847	18852	0 %	66.67 %	0 %	33.33 %	Non-Coding
57	NC_009777	ACT	2	6	18875	18880	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
58	NC_009777	TGG	2	6	18962	18967	0 %	33.33 %	66.67 %	0 %	Non-Coding
59	NC_009777	GAG	2	6	19065	19070	33.33 %	0 %	66.67 %	0 %	Non-Coding
60	NC_009777	GCC	2	6	19091	19096	0 %	0 %	33.33 %	66.67 %	Non-Coding
61	NC_009777	GGC	2	6	19344	19349	0 %	0 %	66.67 %	33.33 %	Non-Coding
62	NC_009777	GAT	2	6	20666	20671	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
63	NC_009777	AGC	2	6	21031	21036	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
64	NC_009777	CTC	2	6	21042	21047	0 %	33.33 %	0 %	66.67 %	Non-Coding
65	NC_009777	AAC	2	6	21049	21054	66.67 %	0 %	0 %	33.33 %	Non-Coding
66	NC_009777	TCA	2	6	21085	21090	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
67	NC_009777	CGC	2	6	21138	21143	0 %	0 %	33.33 %	66.67 %	Non-Coding
68	NC_009777	CAG	2	6	21190	21195	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
69	NC_009777	TGT	2	6	21221	21226	0 %	66.67 %	33.33 %	0 %	Non-Coding
70	NC_009777	TCT	2	6	22484	22489	0 %	66.67 %	0 %	33.33 %	Non-Coding
71	NC_009777	TCG	2	6	22501	22506	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
72	NC_009777	GGA	2	6	22535	22540	33.33 %	0 %	66.67 %	0 %	Non-Coding
73	NC_009777	GGT	2	6	22622	22627	0 %	33.33 %	66.67 %	0 %	Non-Coding
74	NC_009777	TCT	2	6	23915	23920	0 %	66.67 %	0 %	33.33 %	Non-Coding
75	NC_009777	TCA	2	6	23991	23996	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
76	NC_009777	AGT	2	6	25378	25383	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
77	NC_009777	CTA	2	6	27045	27050	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
78	NC_009777	TGC	2	6	27052	27057	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
79	NC_009777	TAT	2	6	28065	28070	33.33 %	66.67 %	0 %	0 %	Non-Coding
80	NC_009777	GAA	3	9	28074	28082	66.67 %	0 %	33.33 %	0 %	Non-Coding
81	NC_009777	GAA	2	6	28142	28147	66.67 %	0 %	33.33 %	0 %	Non-Coding
82	NC_009777	TGG	2	6	29289	29294	0 %	33.33 %	66.67 %	0 %	Non-Coding
83	NC_009777	ATT	2	6	29360	29365	33.33 %	66.67 %	0 %	0 %	Non-Coding
84	NC_009777	TGC	2	6	29535	29540	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
85	NC_009777	ATT	2	6	29591	29596	33.33 %	66.67 %	0 %	0 %	Non-Coding
86	NC_009777	CTG	2	6	29599	29604	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
87	NC_009777	CAA	2	6	35447	35452	66.67 %	0 %	0 %	33.33 %	Non-Coding
88	NC_009777	GGT	2	6	35515	35520	0 %	33.33 %	66.67 %	0 %	Non-Coding
89	NC_009777	CCA	2	6	38416	38421	33.33 %	0 %	0 %	66.67 %	Non-Coding
90	NC_009777	ATA	2	6	38422	38427	66.67 %	33.33 %	0 %	0 %	Non-Coding
91	NC_009777	GCG	2	6	38481	38486	0 %	0 %	66.67 %	33.33 %	Non-Coding
92	NC_009777	GAG	2	6	45310	45315	33.33 %	0 %	66.67 %	0 %	Non-Coding
93	NC_009777	AGT	2	6	47620	47625	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
94	NC_009777	GTT	2	6	47639	47644	0 %	66.67 %	33.33 %	0 %	Non-Coding
95	NC_009777	TAA	2	6	47673	47678	66.67 %	33.33 %	0 %	0 %	Non-Coding
96	NC_009777	GTT	2	6	47707	47712	0 %	66.67 %	33.33 %	0 %	Non-Coding
97	NC_009777	CTA	2	6	47727	47732	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
98	NC_009777	GGT	2	6	47819	47824	0 %	33.33 %	66.67 %	0 %	Non-Coding
99	NC_009777	ACT	2	6	47945	47950	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
100	NC_009777	ACC	2	6	47958	47963	33.33 %	0 %	0 %	66.67 %	Non-Coding
101	NC_009777	GGA	2	6	49040	49045	33.33 %	0 %	66.67 %	0 %	Non-Coding
102	NC_009777	TAA	2	6	49060	49065	66.67 %	33.33 %	0 %	0 %	Non-Coding
103	NC_009777	CTT	2	6	49139	49144	0 %	66.67 %	0 %	33.33 %	Non-Coding
104	NC_009777	CCT	2	6	49157	49162	0 %	33.33 %	0 %	66.67 %	Non-Coding
105	NC_009777	ACT	2	6	49419	49424	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
106	NC_009777	ATA	2	6	49447	49452	66.67 %	33.33 %	0 %	0 %	Non-Coding
107	NC_009777	ATT	2	6	49511	49516	33.33 %	66.67 %	0 %	0 %	Non-Coding
108	NC_009777	TGA	2	6	50130	50135	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
109	NC_009777	GAC	2	6	50163	50168	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
110	NC_009777	TAT	2	6	50184	50189	33.33 %	66.67 %	0 %	0 %	Non-Coding
111	NC_009777	GGC	2	6	52472	52477	0 %	0 %	66.67 %	33.33 %	Non-Coding
112	NC_009777	TGG	2	6	52484	52489	0 %	33.33 %	66.67 %	0 %	Non-Coding
113	NC_009777	TCT	2	6	52543	52548	0 %	66.67 %	0 %	33.33 %	Non-Coding
114	NC_009777	TCT	2	6	52583	52588	0 %	66.67 %	0 %	33.33 %	Non-Coding
115	NC_009777	TTC	2	6	52754	52759	0 %	66.67 %	0 %	33.33 %	Non-Coding
116	NC_009777	CAA	2	6	52813	52818	66.67 %	0 %	0 %	33.33 %	Non-Coding
117	NC_009777	GTT	2	6	52921	52926	0 %	66.67 %	33.33 %	0 %	Non-Coding
118	NC_009777	GTT	2	6	53003	53008	0 %	66.67 %	33.33 %	0 %	Non-Coding
119	NC_009777	TGT	3	9	53597	53605	0 %	66.67 %	33.33 %	0 %	Non-Coding
120	NC_009777	GTT	2	6	53680	53685	0 %	66.67 %	33.33 %	0 %	Non-Coding
121	NC_009777	TAA	2	6	53730	53735	66.67 %	33.33 %	0 %	0 %	Non-Coding
122	NC_009777	TGT	2	6	54787	54792	0 %	66.67 %	33.33 %	0 %	Non-Coding
123	NC_009777	CTT	2	6	55394	55399	0 %	66.67 %	0 %	33.33 %	Non-Coding
124	NC_009777	TAT	2	6	57001	57006	33.33 %	66.67 %	0 %	0 %	Non-Coding
125	NC_009777	TAT	2	6	57045	57050	33.33 %	66.67 %	0 %	0 %	Non-Coding
126	NC_009777	TTC	2	6	57750	57755	0 %	66.67 %	0 %	33.33 %	Non-Coding
127	NC_009777	CTT	2	6	57844	57849	0 %	66.67 %	0 %	33.33 %	Non-Coding
128	NC_009777	TAA	2	6	58476	58481	66.67 %	33.33 %	0 %	0 %	Non-Coding
129	NC_009777	AAC	2	6	58515	58520	66.67 %	0 %	0 %	33.33 %	Non-Coding
130	NC_009777	TTA	2	6	58629	58634	33.33 %	66.67 %	0 %	0 %	Non-Coding
131	NC_009777	TTA	2	6	58712	58717	33.33 %	66.67 %	0 %	0 %	Non-Coding
132	NC_009777	CAC	2	6	58742	58747	33.33 %	0 %	0 %	66.67 %	Non-Coding
133	NC_009777	AAG	2	6	58830	58835	66.67 %	0 %	33.33 %	0 %	Non-Coding
134	NC_009777	ACA	2	6	59139	59144	66.67 %	0 %	0 %	33.33 %	Non-Coding
135	NC_009777	AAG	2	6	59158	59163	66.67 %	0 %	33.33 %	0 %	Non-Coding
136	NC_009777	AGA	3	9	60081	60089	66.67 %	0 %	33.33 %	0 %	Non-Coding
137	NC_009777	GTT	2	6	61897	61902	0 %	66.67 %	33.33 %	0 %	Non-Coding
138	NC_009777	ACA	2	6	61912	61917	66.67 %	0 %	0 %	33.33 %	Non-Coding
139	NC_009777	CAA	2	6	61949	61954	66.67 %	0 %	0 %	33.33 %	Non-Coding
140	NC_009777	CAA	2	6	61962	61967	66.67 %	0 %	0 %	33.33 %	Non-Coding
141	NC_009777	TTA	2	6	62777	62782	33.33 %	66.67 %	0 %	0 %	Non-Coding
142	NC_009777	TCA	2	6	63561	63566	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
143	NC_009777	ATG	2	6	64141	64146	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
144	NC_009777	ATC	2	6	64461	64466	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
145	NC_009777	TGA	2	6	64499	64504	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
146	NC_009777	TCT	2	6	64608	64613	0 %	66.67 %	0 %	33.33 %	Non-Coding
147	NC_009777	CAT	2	6	64637	64642	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
148	NC_009777	ATG	2	6	65880	65885	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
149	NC_009777	ATC	2	6	65913	65918	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
150	NC_009777	CTT	2	6	65989	65994	0 %	66.67 %	0 %	33.33 %	Non-Coding
151	NC_009777	AGG	2	6	66010	66015	33.33 %	0 %	66.67 %	0 %	Non-Coding
152	NC_009777	GTC	2	6	66149	66154	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
153	NC_009777	GAA	3	9	66372	66380	66.67 %	0 %	33.33 %	0 %	Non-Coding
154	NC_009777	ATG	2	6	66518	66523	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
155	NC_009777	AAC	2	6	66642	66647	66.67 %	0 %	0 %	33.33 %	Non-Coding
156	NC_009777	TGC	2	6	66701	66706	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
157	NC_009777	AAG	2	6	67061	67066	66.67 %	0 %	33.33 %	0 %	Non-Coding
158	NC_009777	ATT	2	6	68739	68744	33.33 %	66.67 %	0 %	0 %	Non-Coding
159	NC_009777	ATT	2	6	69341	69346	33.33 %	66.67 %	0 %	0 %	Non-Coding
160	NC_009777	GAG	2	6	69371	69376	33.33 %	0 %	66.67 %	0 %	Non-Coding
161	NC_009777	TCC	2	6	69382	69387	0 %	33.33 %	0 %	66.67 %	Non-Coding
162	NC_009777	TGG	2	6	69396	69401	0 %	33.33 %	66.67 %	0 %	Non-Coding
163	NC_009777	TCA	2	6	71369	71374	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
164	NC_009777	AGG	2	6	71412	71417	33.33 %	0 %	66.67 %	0 %	Non-Coding
165	NC_009777	TCT	2	6	71422	71427	0 %	66.67 %	0 %	33.33 %	Non-Coding
166	NC_009777	CTA	2	6	71629	71634	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
167	NC_009777	GGT	2	6	74027	74032	0 %	33.33 %	66.67 %	0 %	Non-Coding
168	NC_009777	TTG	2	6	74274	74279	0 %	66.67 %	33.33 %	0 %	Non-Coding
169	NC_009777	CTG	2	6	74423	74428	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
170	NC_009777	ATT	2	6	78493	78498	33.33 %	66.67 %	0 %	0 %	Non-Coding
171	NC_009777	CCA	2	6	81075	81080	33.33 %	0 %	0 %	66.67 %	Non-Coding
172	NC_009777	ATT	2	6	83513	83518	33.33 %	66.67 %	0 %	0 %	Non-Coding
173	NC_009777	TTG	2	6	83540	83545	0 %	66.67 %	33.33 %	0 %	Non-Coding
174	NC_009777	AGC	2	6	83926	83931	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
175	NC_009777	AAG	2	6	84011	84016	66.67 %	0 %	33.33 %	0 %	Non-Coding
176	NC_009777	AAT	2	6	84076	84081	66.67 %	33.33 %	0 %	0 %	Non-Coding
177	NC_009777	TTA	2	6	84143	84148	33.33 %	66.67 %	0 %	0 %	Non-Coding
178	NC_009777	TTA	2	6	84194	84199	33.33 %	66.67 %	0 %	0 %	Non-Coding
179	NC_009777	TTA	2	6	84211	84216	33.33 %	66.67 %	0 %	0 %	Non-Coding
180	NC_009777	TCC	2	6	84891	84896	0 %	33.33 %	0 %	66.67 %	Non-Coding
181	NC_009777	ATG	2	6	84934	84939	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
182	NC_009777	TGA	2	6	84972	84977	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
183	NC_009777	ATT	2	6	87247	87252	33.33 %	66.67 %	0 %	0 %	Non-Coding
184	NC_009777	TTG	2	6	88919	88924	0 %	66.67 %	33.33 %	0 %	Non-Coding
185	NC_009777	GGC	2	6	88943	88948	0 %	0 %	66.67 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.