MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Ignicoccus hospitalis KIN4/I chromosome

Total Repeats: 39

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009776	CCCCTC	2	12	26924	26935	0 %	16.67 %	0 %	83.33 %	Non-Coding
2	NC_009776	TGGCGC	2	12	56306	56317	0 %	16.67 %	50 %	33.33 %	Non-Coding
3	NC_009776	CCCGGC	2	12	56527	56538	0 %	0 %	33.33 %	66.67 %	Non-Coding
4	NC_009776	AAGCTT	2	12	178565	178576	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
5	NC_009776	GCCCGA	2	12	242118	242129	16.67 %	0 %	33.33 %	50 %	Non-Coding
6	NC_009776	GGGAGG	2	12	250429	250440	16.67 %	0 %	83.33 %	0 %	Non-Coding
7	NC_009776	AGCTCC	2	12	252123	252134	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
8	NC_009776	ATGGAA	2	12	260357	260368	50 %	16.67 %	33.33 %	0 %	Non-Coding
9	NC_009776	CTCCCC	2	12	380606	380617	0 %	16.67 %	0 %	83.33 %	Non-Coding
10	NC_009776	CTTCCC	2	12	384256	384267	0 %	33.33 %	0 %	66.67 %	Non-Coding
11	NC_009776	GCCCGG	2	12	424972	424983	0 %	0 %	50 %	50 %	Non-Coding
12	NC_009776	CAAGCC	2	12	433123	433134	33.33 %	0 %	16.67 %	50 %	Non-Coding
13	NC_009776	CCTCCG	2	12	452967	452978	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
14	NC_009776	AGGCCA	2	12	453502	453513	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
15	NC_009776	CCCGGA	2	12	498934	498945	16.67 %	0 %	33.33 %	50 %	Non-Coding
16	NC_009776	GCGGAC	2	12	560794	560805	16.67 %	0 %	50 %	33.33 %	Non-Coding
17	NC_009776	CCCTTA	2	12	682320	682331	16.67 %	33.33 %	0 %	50 %	Non-Coding
18	NC_009776	CCCGTC	2	12	689770	689781	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
19	NC_009776	TTTAGC	2	12	717743	717754	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
20	NC_009776	ACACCG	2	12	719703	719714	33.33 %	0 %	16.67 %	50 %	Non-Coding
21	NC_009776	TACCCC	2	12	728117	728128	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
22	NC_009776	CCCGCC	2	12	728334	728345	0 %	0 %	16.67 %	83.33 %	Non-Coding
23	NC_009776	GGGAGC	2	12	728660	728671	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
24	NC_009776	TACCCC	2	12	731080	731091	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
25	NC_009776	CCTCGC	2	12	894216	894227	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
26	NC_009776	CGTCTA	2	12	915843	915854	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
27	NC_009776	TTAAAT	2	12	930167	930178	50 %	50 %	0 %	0 %	Non-Coding
28	NC_009776	TACGCT	2	12	949894	949905	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
29	NC_009776	TCCCCC	2	12	951399	951410	0 %	16.67 %	0 %	83.33 %	Non-Coding
30	NC_009776	TCCTCT	2	12	965038	965049	0 %	50 %	0 %	50 %	Non-Coding
31	NC_009776	CGGGGG	2	12	967953	967964	0 %	0 %	83.33 %	16.67 %	Non-Coding
32	NC_009776	AGAGAT	2	12	1009983	1009994	50 %	16.67 %	33.33 %	0 %	Non-Coding
33	NC_009776	AAGTCT	2	12	1010201	1010212	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
34	NC_009776	GTCTTT	2	12	1057172	1057183	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
35	NC_009776	CAAGCC	2	12	1060458	1060469	33.33 %	0 %	16.67 %	50 %	Non-Coding
36	NC_009776	GAAGAG	2	12	1141132	1141143	50 %	0 %	50 %	0 %	Non-Coding
37	NC_009776	ACCTCC	2	12	1149054	1149065	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
38	NC_009776	TCGCTC	2	12	1207819	1207830	0 %	33.33 %	16.67 %	50 %	Non-Coding
39	NC_009776	GCTTCA	2	12	1207838	1207849	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.