MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Shewanella baltica OS185 plasmid pS18501

Total Repeats: 148

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009661	GTT	2	6	1404	1409	0 %	66.67 %	33.33 %	0 %	Non-Coding
2	NC_009661	GAT	2	6	1444	1449	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
3	NC_009661	TAA	2	6	1464	1469	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_009661	TTG	2	6	1550	1555	0 %	66.67 %	33.33 %	0 %	Non-Coding
5	NC_009661	AGA	2	6	1573	1578	66.67 %	0 %	33.33 %	0 %	Non-Coding
6	NC_009661	TAC	2	6	1700	1705	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7	NC_009661	TTG	2	6	1796	1801	0 %	66.67 %	33.33 %	0 %	Non-Coding
8	NC_009661	ATT	2	6	1870	1875	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_009661	TTA	2	6	2081	2086	33.33 %	66.67 %	0 %	0 %	Non-Coding
10	NC_009661	ATT	2	6	2207	2212	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_009661	TTG	2	6	3994	3999	0 %	66.67 %	33.33 %	0 %	Non-Coding
12	NC_009661	ATT	2	6	4384	4389	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_009661	TCC	2	6	4454	4459	0 %	33.33 %	0 %	66.67 %	Non-Coding
14	NC_009661	TGG	2	6	4554	4559	0 %	33.33 %	66.67 %	0 %	Non-Coding
15	NC_009661	ATG	2	6	4583	4588	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
16	NC_009661	CAT	2	6	4629	4634	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_009661	TAT	2	6	4635	4640	33.33 %	66.67 %	0 %	0 %	Non-Coding
18	NC_009661	TTA	2	6	4641	4646	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_009661	CTG	2	6	4657	4662	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
20	NC_009661	TGC	2	6	4670	4675	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
21	NC_009661	GCA	2	6	4743	4748	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
22	NC_009661	GGC	2	6	4855	4860	0 %	0 %	66.67 %	33.33 %	Non-Coding
23	NC_009661	TCC	2	6	4927	4932	0 %	33.33 %	0 %	66.67 %	Non-Coding
24	NC_009661	ATT	2	6	6062	6067	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_009661	GTA	2	6	6203	6208	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
26	NC_009661	TAA	2	6	6249	6254	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_009661	ATT	2	6	6537	6542	33.33 %	66.67 %	0 %	0 %	Non-Coding
28	NC_009661	GCC	2	6	6705	6710	0 %	0 %	33.33 %	66.67 %	Non-Coding
29	NC_009661	TTC	2	6	7317	7322	0 %	66.67 %	0 %	33.33 %	Non-Coding
30	NC_009661	GAT	2	6	7329	7334	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
31	NC_009661	AAT	2	6	7350	7355	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_009661	AAT	2	6	10080	10085	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_009661	ATA	2	6	10317	10322	66.67 %	33.33 %	0 %	0 %	Non-Coding
34	NC_009661	AAT	2	6	10666	10671	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_009661	GGC	2	6	11740	11745	0 %	0 %	66.67 %	33.33 %	Non-Coding
36	NC_009661	CGC	2	6	11748	11753	0 %	0 %	33.33 %	66.67 %	Non-Coding
37	NC_009661	ATG	2	6	13696	13701	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
38	NC_009661	TTG	2	6	13794	13799	0 %	66.67 %	33.33 %	0 %	Non-Coding
39	NC_009661	TAT	2	6	13842	13847	33.33 %	66.67 %	0 %	0 %	Non-Coding
40	NC_009661	TGA	2	6	14951	14956	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
41	NC_009661	CAT	2	6	15044	15049	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
42	NC_009661	TAA	2	6	16345	16350	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_009661	GAT	2	6	17548	17553	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
44	NC_009661	AGA	2	6	17737	17742	66.67 %	0 %	33.33 %	0 %	Non-Coding
45	NC_009661	GTT	2	6	17899	17904	0 %	66.67 %	33.33 %	0 %	Non-Coding
46	NC_009661	CGG	2	6	17918	17923	0 %	0 %	66.67 %	33.33 %	Non-Coding
47	NC_009661	TTA	2	6	17930	17935	33.33 %	66.67 %	0 %	0 %	Non-Coding
48	NC_009661	ATT	2	6	21062	21067	33.33 %	66.67 %	0 %	0 %	Non-Coding
49	NC_009661	CAT	2	6	21175	21180	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
50	NC_009661	GAA	2	6	21313	21318	66.67 %	0 %	33.33 %	0 %	Non-Coding
51	NC_009661	GAG	2	6	21335	21340	33.33 %	0 %	66.67 %	0 %	Non-Coding
52	NC_009661	ATA	2	6	21666	21671	66.67 %	33.33 %	0 %	0 %	Non-Coding
53	NC_009661	AGA	2	6	21696	21701	66.67 %	0 %	33.33 %	0 %	Non-Coding
54	NC_009661	CTG	2	6	21708	21713	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
55	NC_009661	TGT	2	6	22579	22584	0 %	66.67 %	33.33 %	0 %	Non-Coding
56	NC_009661	GGT	2	6	23751	23756	0 %	33.33 %	66.67 %	0 %	Non-Coding
57	NC_009661	ACC	2	6	24869	24874	33.33 %	0 %	0 %	66.67 %	Non-Coding
58	NC_009661	ATT	2	6	25139	25144	33.33 %	66.67 %	0 %	0 %	Non-Coding
59	NC_009661	CAG	2	6	25196	25201	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
60	NC_009661	TTA	2	6	25218	25223	33.33 %	66.67 %	0 %	0 %	Non-Coding
61	NC_009661	ATA	2	6	25253	25258	66.67 %	33.33 %	0 %	0 %	Non-Coding
62	NC_009661	GGT	2	6	25447	25452	0 %	33.33 %	66.67 %	0 %	Non-Coding
63	NC_009661	TCG	2	6	26167	26172	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
64	NC_009661	GGC	2	6	26177	26182	0 %	0 %	66.67 %	33.33 %	Non-Coding
65	NC_009661	CTA	2	6	26199	26204	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
66	NC_009661	TTC	2	6	26992	26997	0 %	66.67 %	0 %	33.33 %	Non-Coding
67	NC_009661	GTC	2	6	27163	27168	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
68	NC_009661	GTT	2	6	27222	27227	0 %	66.67 %	33.33 %	0 %	Non-Coding
69	NC_009661	CAA	2	6	27272	27277	66.67 %	0 %	0 %	33.33 %	Non-Coding
70	NC_009661	AAT	2	6	27284	27289	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_009661	CAA	2	6	27314	27319	66.67 %	0 %	0 %	33.33 %	Non-Coding
72	NC_009661	ATT	2	6	27335	27340	33.33 %	66.67 %	0 %	0 %	Non-Coding
73	NC_009661	GCG	2	6	27429	27434	0 %	0 %	66.67 %	33.33 %	Non-Coding
74	NC_009661	GCA	2	6	27463	27468	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
75	NC_009661	ATT	2	6	27514	27519	33.33 %	66.67 %	0 %	0 %	Non-Coding
76	NC_009661	CTG	2	6	27591	27596	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
77	NC_009661	TTG	2	6	27636	27641	0 %	66.67 %	33.33 %	0 %	Non-Coding
78	NC_009661	GTG	2	6	28999	29004	0 %	33.33 %	66.67 %	0 %	Non-Coding
79	NC_009661	CGT	2	6	29050	29055	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
80	NC_009661	CAC	2	6	30553	30558	33.33 %	0 %	0 %	66.67 %	Non-Coding
81	NC_009661	GAA	2	6	30626	30631	66.67 %	0 %	33.33 %	0 %	Non-Coding
82	NC_009661	ATG	2	6	30842	30847	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
83	NC_009661	CAA	2	6	32067	32072	66.67 %	0 %	0 %	33.33 %	Non-Coding
84	NC_009661	CTT	2	6	32208	32213	0 %	66.67 %	0 %	33.33 %	Non-Coding
85	NC_009661	CGC	2	6	32253	32258	0 %	0 %	33.33 %	66.67 %	Non-Coding
86	NC_009661	ATA	2	6	34316	34321	66.67 %	33.33 %	0 %	0 %	Non-Coding
87	NC_009661	AGG	2	6	35313	35318	33.33 %	0 %	66.67 %	0 %	Non-Coding
88	NC_009661	AAT	2	6	35575	35580	66.67 %	33.33 %	0 %	0 %	Non-Coding
89	NC_009661	TTG	2	6	35595	35600	0 %	66.67 %	33.33 %	0 %	Non-Coding
90	NC_009661	GCC	2	6	35663	35668	0 %	0 %	33.33 %	66.67 %	Non-Coding
91	NC_009661	GCG	2	6	35718	35723	0 %	0 %	66.67 %	33.33 %	Non-Coding
92	NC_009661	GCC	2	6	35729	35734	0 %	0 %	33.33 %	66.67 %	Non-Coding
93	NC_009661	CGG	2	6	35784	35789	0 %	0 %	66.67 %	33.33 %	Non-Coding
94	NC_009661	GCT	2	6	35818	35823	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
95	NC_009661	TGA	2	6	35850	35855	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
96	NC_009661	CAT	2	6	37302	37307	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
97	NC_009661	CTC	2	6	37354	37359	0 %	33.33 %	0 %	66.67 %	Non-Coding
98	NC_009661	GTA	2	6	37491	37496	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
99	NC_009661	TGA	3	9	38430	38438	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
100	NC_009661	TTG	2	6	38462	38467	0 %	66.67 %	33.33 %	0 %	Non-Coding
101	NC_009661	GCG	2	6	38811	38816	0 %	0 %	66.67 %	33.33 %	Non-Coding
102	NC_009661	GCC	2	6	38822	38827	0 %	0 %	33.33 %	66.67 %	Non-Coding
103	NC_009661	CGG	2	6	38877	38882	0 %	0 %	66.67 %	33.33 %	Non-Coding
104	NC_009661	GCT	2	6	38911	38916	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
105	NC_009661	TGA	2	6	38943	38948	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
106	NC_009661	ACC	2	6	39064	39069	33.33 %	0 %	0 %	66.67 %	Non-Coding
107	NC_009661	CAT	2	6	39134	39139	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
108	NC_009661	CAC	2	6	39192	39197	33.33 %	0 %	0 %	66.67 %	Non-Coding
109	NC_009661	GAT	2	6	39286	39291	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
110	NC_009661	TTA	2	6	40345	40350	33.33 %	66.67 %	0 %	0 %	Non-Coding
111	NC_009661	GCC	2	6	40664	40669	0 %	0 %	33.33 %	66.67 %	Non-Coding
112	NC_009661	GCA	2	6	40746	40751	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
113	NC_009661	GTT	2	6	40884	40889	0 %	66.67 %	33.33 %	0 %	Non-Coding
114	NC_009661	TAA	2	6	40995	41000	66.67 %	33.33 %	0 %	0 %	Non-Coding
115	NC_009661	AAT	2	6	41001	41006	66.67 %	33.33 %	0 %	0 %	Non-Coding
116	NC_009661	ATT	2	6	41074	41079	33.33 %	66.67 %	0 %	0 %	Non-Coding
117	NC_009661	GTT	2	6	41183	41188	0 %	66.67 %	33.33 %	0 %	Non-Coding
118	NC_009661	TGC	2	6	54740	54745	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
119	NC_009661	TGA	2	6	54866	54871	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
120	NC_009661	CAT	2	6	67637	67642	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
121	NC_009661	TTA	2	6	68609	68614	33.33 %	66.67 %	0 %	0 %	Non-Coding
122	NC_009661	TTC	2	6	68619	68624	0 %	66.67 %	0 %	33.33 %	Non-Coding
123	NC_009661	AAT	2	6	68681	68686	66.67 %	33.33 %	0 %	0 %	Non-Coding
124	NC_009661	TAA	2	6	68701	68706	66.67 %	33.33 %	0 %	0 %	Non-Coding
125	NC_009661	AAG	2	6	68880	68885	66.67 %	0 %	33.33 %	0 %	Non-Coding
126	NC_009661	TGG	3	9	69078	69086	0 %	33.33 %	66.67 %	0 %	Non-Coding
127	NC_009661	TCC	2	6	69138	69143	0 %	33.33 %	0 %	66.67 %	Non-Coding
128	NC_009661	AAC	2	6	69367	69372	66.67 %	0 %	0 %	33.33 %	Non-Coding
129	NC_009661	TTG	2	6	69427	69432	0 %	66.67 %	33.33 %	0 %	Non-Coding
130	NC_009661	GCA	2	6	69554	69559	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
131	NC_009661	CAC	2	6	69573	69578	33.33 %	0 %	0 %	66.67 %	Non-Coding
132	NC_009661	ATT	2	6	69817	69822	33.33 %	66.67 %	0 %	0 %	Non-Coding
133	NC_009661	GCT	2	6	69828	69833	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
134	NC_009661	GCA	2	6	69838	69843	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
135	NC_009661	GGC	2	6	70682	70687	0 %	0 %	66.67 %	33.33 %	Non-Coding
136	NC_009661	TTA	2	6	70841	70846	33.33 %	66.67 %	0 %	0 %	Non-Coding
137	NC_009661	TTA	2	6	70930	70935	33.33 %	66.67 %	0 %	0 %	Non-Coding
138	NC_009661	GAA	2	6	71137	71142	66.67 %	0 %	33.33 %	0 %	Non-Coding
139	NC_009661	TGT	2	6	71580	71585	0 %	66.67 %	33.33 %	0 %	Non-Coding
140	NC_009661	ATT	2	6	71694	71699	33.33 %	66.67 %	0 %	0 %	Non-Coding
141	NC_009661	GAG	2	6	71701	71706	33.33 %	0 %	66.67 %	0 %	Non-Coding
142	NC_009661	TTA	2	6	74082	74087	33.33 %	66.67 %	0 %	0 %	Non-Coding
143	NC_009661	AAT	2	6	74217	74222	66.67 %	33.33 %	0 %	0 %	Non-Coding
144	NC_009661	GTG	2	6	74235	74240	0 %	33.33 %	66.67 %	0 %	Non-Coding
145	NC_009661	CAA	2	6	74304	74309	66.67 %	0 %	0 %	33.33 %	Non-Coding
146	NC_009661	ATT	2	6	75157	75162	33.33 %	66.67 %	0 %	0 %	Non-Coding
147	NC_009661	AAT	2	6	75307	75312	66.67 %	33.33 %	0 %	0 %	Non-Coding
148	NC_009661	CTT	2	6	75421	75426	0 %	66.67 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.