MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Janthinobacterium sp. Marseille chromosome

Total Repeats: 115

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009659	TCAAAA	2	12	9477	9488	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
2	NC_009659	TAAATA	2	12	59133	59144	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_009659	CTGCCG	2	12	211664	211675	0 %	16.67 %	33.33 %	50 %	Non-Coding
4	NC_009659	TGGCAA	2	12	246560	246571	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
5	NC_009659	CTCATG	2	12	259894	259905	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
6	NC_009659	GGCAAC	2	12	267833	267844	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7	NC_009659	TTTTCA	2	12	365998	366009	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
8	NC_009659	TTGGCT	2	12	406422	406433	0 %	50 %	33.33 %	16.67 %	Non-Coding
9	NC_009659	GCAAAT	2	12	432425	432436	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
10	NC_009659	TAACCA	2	12	438508	438519	50 %	16.67 %	0 %	33.33 %	Non-Coding
11	NC_009659	TAGCTA	2	12	443881	443892	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
12	NC_009659	AGGTCT	2	12	553703	553714	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
13	NC_009659	TGCGCT	2	12	561912	561923	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
14	NC_009659	TCAAAT	2	12	566909	566920	50 %	33.33 %	0 %	16.67 %	Non-Coding
15	NC_009659	CTCATG	2	12	630694	630705	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
16	NC_009659	ACGCTT	2	12	635862	635873	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
17	NC_009659	GCGTTG	2	12	646864	646875	0 %	33.33 %	50 %	16.67 %	Non-Coding
18	NC_009659	GCTTAC	2	12	778363	778374	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
19	NC_009659	TGTGAA	2	12	790175	790186	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
20	NC_009659	GTACTG	2	12	793959	793970	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
21	NC_009659	GATGTC	2	12	846360	846371	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
22	NC_009659	TTTTAC	2	12	950611	950622	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
23	NC_009659	TCAGTA	2	12	991070	991081	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
24	NC_009659	GAAAAA	2	12	997521	997532	83.33 %	0 %	16.67 %	0 %	Non-Coding
25	NC_009659	AAATAT	2	12	1018358	1018369	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_009659	GATAGC	2	12	1018576	1018587	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
27	NC_009659	CATTCG	2	12	1037401	1037412	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
28	NC_009659	TCTTCG	2	12	1072974	1072985	0 %	50 %	16.67 %	33.33 %	Non-Coding
29	NC_009659	TGAAAT	2	12	1080787	1080798	50 %	33.33 %	16.67 %	0 %	Non-Coding
30	NC_009659	CTTCGT	2	12	1082474	1082485	0 %	50 %	16.67 %	33.33 %	Non-Coding
31	NC_009659	CTGCAT	2	12	1109691	1109702	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
32	NC_009659	TTGCAG	2	12	1141943	1141954	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
33	NC_009659	ATAAAA	2	12	1147064	1147075	83.33 %	16.67 %	0 %	0 %	Non-Coding
34	NC_009659	ATTGCA	2	12	1156399	1156410	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
35	NC_009659	TTTTTA	2	12	1163494	1163505	16.67 %	83.33 %	0 %	0 %	Non-Coding
36	NC_009659	TCGTTA	2	12	1198714	1198725	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
37	NC_009659	GCTTGC	2	12	1312910	1312921	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
38	NC_009659	AAGCGC	2	12	1312922	1312933	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
39	NC_009659	TAGCAA	2	12	1360825	1360836	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
40	NC_009659	TCCGGT	2	12	1363597	1363608	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
41	NC_009659	TTTTAA	2	12	1385809	1385820	33.33 %	66.67 %	0 %	0 %	Non-Coding
42	NC_009659	TCGTTC	2	12	1422920	1422931	0 %	50 %	16.67 %	33.33 %	Non-Coding
43	NC_009659	TTAAAC	2	12	1426517	1426528	50 %	33.33 %	0 %	16.67 %	Non-Coding
44	NC_009659	CGCCGG	2	12	1500373	1500384	0 %	0 %	50 %	50 %	Non-Coding
45	NC_009659	TTGTTT	2	12	1518046	1518057	0 %	83.33 %	16.67 %	0 %	Non-Coding
46	NC_009659	GGGACA	2	12	1538476	1538487	33.33 %	0 %	50 %	16.67 %	Non-Coding
47	NC_009659	TATTCA	2	12	1595813	1595824	33.33 %	50 %	0 %	16.67 %	Non-Coding
48	NC_009659	AGATCA	2	12	1628823	1628834	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
49	NC_009659	TGTTCT	2	12	1650136	1650147	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
50	NC_009659	GTTGAA	2	12	1721621	1721632	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
51	NC_009659	TGAAAT	2	12	1762076	1762087	50 %	33.33 %	16.67 %	0 %	Non-Coding
52	NC_009659	AGTATG	2	12	1779170	1779181	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
53	NC_009659	TCATTT	2	12	1857625	1857636	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
54	NC_009659	CCAATA	2	12	1867015	1867026	50 %	16.67 %	0 %	33.33 %	Non-Coding
55	NC_009659	CATTTG	2	12	1878604	1878615	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
56	NC_009659	CGACCT	2	12	1919302	1919313	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
57	NC_009659	TACGCG	2	12	1919430	1919441	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
58	NC_009659	GCATAA	2	12	1986257	1986268	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
59	NC_009659	TCGCCG	2	12	2013961	2013972	0 %	16.67 %	33.33 %	50 %	Non-Coding
60	NC_009659	AGCCCC	2	12	2017668	2017679	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
61	NC_009659	CGTTTA	2	12	2033739	2033750	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
62	NC_009659	GGGATG	2	12	2058732	2058743	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
63	NC_009659	ATTGCA	2	12	2111349	2111360	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
64	NC_009659	GGATGC	2	12	2182141	2182152	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
65	NC_009659	CTGCTT	2	12	2187712	2187723	0 %	50 %	16.67 %	33.33 %	Non-Coding
66	NC_009659	TAAATA	2	12	2194159	2194170	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_009659	ATCAGC	2	12	2265600	2265611	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
68	NC_009659	TCCGGA	2	12	2371470	2371481	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
69	NC_009659	TTGCCT	2	12	2378673	2378684	0 %	50 %	16.67 %	33.33 %	Non-Coding
70	NC_009659	TTTTTC	2	12	2385904	2385915	0 %	83.33 %	0 %	16.67 %	Non-Coding
71	NC_009659	AAAAGG	2	12	2389092	2389103	66.67 %	0 %	33.33 %	0 %	Non-Coding
72	NC_009659	GTCTGT	2	12	2389165	2389176	0 %	50 %	33.33 %	16.67 %	Non-Coding
73	NC_009659	CAGCGG	2	12	2421758	2421769	16.67 %	0 %	50 %	33.33 %	Non-Coding
74	NC_009659	GGCCCC	2	12	2421805	2421816	0 %	0 %	33.33 %	66.67 %	Non-Coding
75	NC_009659	TGAAAA	2	12	2440771	2440782	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
76	NC_009659	GCGCAA	2	12	2443758	2443769	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
77	NC_009659	TTGCTG	2	12	2472550	2472561	0 %	50 %	33.33 %	16.67 %	Non-Coding
78	NC_009659	TTCCAA	2	12	2485918	2485929	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
79	NC_009659	ACAGAA	2	12	2501586	2501597	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
80	NC_009659	TGAGCT	2	12	2570106	2570117	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
81	NC_009659	TGGCTG	2	12	2614944	2614955	0 %	33.33 %	50 %	16.67 %	Non-Coding
82	NC_009659	AAGTGT	2	12	2680047	2680058	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
83	NC_009659	AGTTTA	2	12	2708928	2708939	33.33 %	50 %	16.67 %	0 %	Non-Coding
84	NC_009659	TTGCCG	2	12	2814454	2814465	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
85	NC_009659	GTTTTT	2	12	2922049	2922060	0 %	83.33 %	16.67 %	0 %	Non-Coding
86	NC_009659	CAGCAA	2	12	2949357	2949368	50 %	0 %	16.67 %	33.33 %	Non-Coding
87	NC_009659	CGCAAC	2	12	2949942	2949953	33.33 %	0 %	16.67 %	50 %	Non-Coding
88	NC_009659	ATTTCA	2	12	2971418	2971429	33.33 %	50 %	0 %	16.67 %	Non-Coding
89	NC_009659	GCGCAC	2	12	3043305	3043316	16.67 %	0 %	33.33 %	50 %	Non-Coding
90	NC_009659	TCGCGC	2	12	3065703	3065714	0 %	16.67 %	33.33 %	50 %	Non-Coding
91	NC_009659	TGGCGG	2	12	3092812	3092823	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
92	NC_009659	AACGCG	2	12	3172541	3172552	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
93	NC_009659	TTTTAT	2	12	3176284	3176295	16.67 %	83.33 %	0 %	0 %	Non-Coding
94	NC_009659	TATGAC	2	12	3192456	3192467	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
95	NC_009659	AAAGCA	2	12	3266260	3266271	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
96	NC_009659	AAAATT	2	12	3330784	3330795	66.67 %	33.33 %	0 %	0 %	Non-Coding
97	NC_009659	TTGGGC	2	12	3369475	3369486	0 %	33.33 %	50 %	16.67 %	Non-Coding
98	NC_009659	AGCAAA	2	12	3423685	3423696	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
99	NC_009659	TACCCT	2	12	3437795	3437806	16.67 %	33.33 %	0 %	50 %	Non-Coding
100	NC_009659	TAAAAA	2	12	3442561	3442572	83.33 %	16.67 %	0 %	0 %	Non-Coding
101	NC_009659	GCATCA	2	12	3463471	3463482	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
102	NC_009659	GAACAT	2	12	3520733	3520744	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
103	NC_009659	ATTCGG	2	12	3537971	3537982	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
104	NC_009659	ATTCGG	2	12	3593823	3593834	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
105	NC_009659	CGAAAA	2	12	3677746	3677757	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
106	NC_009659	AACCAA	2	12	3749003	3749014	66.67 %	0 %	0 %	33.33 %	Non-Coding
107	NC_009659	ACTACC	2	12	3802254	3802265	33.33 %	16.67 %	0 %	50 %	Non-Coding
108	NC_009659	TCTTGT	2	12	3827872	3827883	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
109	NC_009659	ATCAAG	2	12	3952538	3952549	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
110	NC_009659	ATTCAT	2	12	3967459	3967470	33.33 %	50 %	0 %	16.67 %	Non-Coding
111	NC_009659	CAAAAA	2	12	3967841	3967852	83.33 %	0 %	0 %	16.67 %	Non-Coding
112	NC_009659	AATGAT	2	12	4024997	4025008	50 %	33.33 %	16.67 %	0 %	Non-Coding
113	NC_009659	CAAAAA	2	12	4026365	4026376	83.33 %	0 %	0 %	16.67 %	Non-Coding
114	NC_009659	AAAGTT	2	12	4032234	4032245	50 %	33.33 %	16.67 %	0 %	Non-Coding
115	NC_009659	TTCAGT	2	12	4105695	4105706	16.67 %	50 %	16.67 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.