MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Mycobacterium tuberculosis H37Ra chromosome

Total Repeats: 6073

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
6001	NC_009525	AAC	2	6	4344953	4344958	66.67 %	0 %	0 %	33.33 %	Non-Coding
6002	NC_009525	CGG	2	6	4344967	4344972	0 %	0 %	66.67 %	33.33 %	Non-Coding
6003	NC_009525	TGT	2	6	4344980	4344985	0 %	66.67 %	33.33 %	0 %	Non-Coding
6004	NC_009525	GCC	2	6	4344997	4345002	0 %	0 %	33.33 %	66.67 %	Non-Coding
6005	NC_009525	CGA	2	6	4345004	4345009	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6006	NC_009525	TCA	2	6	4345154	4345159	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
6007	NC_009525	GAG	2	6	4345214	4345219	33.33 %	0 %	66.67 %	0 %	Non-Coding
6008	NC_009525	CAG	2	6	4346421	4346426	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6009	NC_009525	TCG	2	6	4346471	4346476	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6010	NC_009525	GGC	2	6	4346604	4346609	0 %	0 %	66.67 %	33.33 %	Non-Coding
6011	NC_009525	TCC	2	6	4346990	4346995	0 %	33.33 %	0 %	66.67 %	Non-Coding
6012	NC_009525	TGC	2	6	4347012	4347017	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6013	NC_009525	CCG	2	6	4347056	4347061	0 %	0 %	33.33 %	66.67 %	Non-Coding
6014	NC_009525	GCT	2	6	4348638	4348643	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6015	NC_009525	ATG	2	6	4348675	4348680	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
6016	NC_009525	CAG	2	6	4349941	4349946	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6017	NC_009525	AGG	2	6	4349997	4350002	33.33 %	0 %	66.67 %	0 %	Non-Coding
6018	NC_009525	CGA	2	6	4357181	4357186	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6019	NC_009525	GAG	3	9	4357203	4357211	33.33 %	0 %	66.67 %	0 %	Non-Coding
6020	NC_009525	CGA	2	6	4357234	4357239	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6021	NC_009525	GAG	3	9	4357256	4357264	33.33 %	0 %	66.67 %	0 %	Non-Coding
6022	NC_009525	ATT	2	6	4359050	4359055	33.33 %	66.67 %	0 %	0 %	Non-Coding
6023	NC_009525	AAG	2	6	4359178	4359183	66.67 %	0 %	33.33 %	0 %	Non-Coding
6024	NC_009525	ACA	2	6	4360640	4360645	66.67 %	0 %	0 %	33.33 %	Non-Coding
6025	NC_009525	AGT	2	6	4360709	4360714	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
6026	NC_009525	TGC	2	6	4365069	4365074	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6027	NC_009525	ATG	2	6	4368362	4368367	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
6028	NC_009525	GGT	2	6	4368389	4368394	0 %	33.33 %	66.67 %	0 %	Non-Coding
6029	NC_009525	GGT	2	6	4368435	4368440	0 %	33.33 %	66.67 %	0 %	Non-Coding
6030	NC_009525	GCG	2	6	4368600	4368605	0 %	0 %	66.67 %	33.33 %	Non-Coding
6031	NC_009525	ACC	2	6	4368627	4368632	33.33 %	0 %	0 %	66.67 %	Non-Coding
6032	NC_009525	CAA	2	6	4368634	4368639	66.67 %	0 %	0 %	33.33 %	Non-Coding
6033	NC_009525	ATC	2	6	4370377	4370382	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
6034	NC_009525	TCG	2	6	4370405	4370410	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6035	NC_009525	GCC	2	6	4370442	4370447	0 %	0 %	33.33 %	66.67 %	Non-Coding
6036	NC_009525	AAC	2	6	4373310	4373315	66.67 %	0 %	0 %	33.33 %	Non-Coding
6037	NC_009525	CCG	2	6	4373336	4373341	0 %	0 %	33.33 %	66.67 %	Non-Coding
6038	NC_009525	CGC	3	9	4375285	4375293	0 %	0 %	33.33 %	66.67 %	Non-Coding
6039	NC_009525	AGC	2	6	4382099	4382104	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6040	NC_009525	GCT	2	6	4382886	4382891	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6041	NC_009525	GCC	2	6	4384155	4384160	0 %	0 %	33.33 %	66.67 %	Non-Coding
6042	NC_009525	GTC	2	6	4384523	4384528	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6043	NC_009525	CGC	2	6	4384558	4384563	0 %	0 %	33.33 %	66.67 %	Non-Coding
6044	NC_009525	GGA	2	6	4384623	4384628	33.33 %	0 %	66.67 %	0 %	Non-Coding
6045	NC_009525	ACT	2	6	4391404	4391409	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
6046	NC_009525	GCA	2	6	4392500	4392505	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6047	NC_009525	CGC	2	6	4392520	4392525	0 %	0 %	33.33 %	66.67 %	Non-Coding
6048	NC_009525	AGC	2	6	4394768	4394773	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6049	NC_009525	CGT	2	6	4394788	4394793	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6050	NC_009525	CGC	2	6	4395282	4395287	0 %	0 %	33.33 %	66.67 %	Non-Coding
6051	NC_009525	CAC	2	6	4395358	4395363	33.33 %	0 %	0 %	66.67 %	Non-Coding
6052	NC_009525	CTG	2	6	4395435	4395440	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6053	NC_009525	GCC	2	6	4395566	4395571	0 %	0 %	33.33 %	66.67 %	Non-Coding
6054	NC_009525	ACA	2	6	4395597	4395602	66.67 %	0 %	0 %	33.33 %	Non-Coding
6055	NC_009525	CGC	2	6	4395617	4395622	0 %	0 %	33.33 %	66.67 %	Non-Coding
6056	NC_009525	GCT	2	6	4395711	4395716	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6057	NC_009525	GCC	2	6	4399517	4399522	0 %	0 %	33.33 %	66.67 %	Non-Coding
6058	NC_009525	CGC	2	6	4399533	4399538	0 %	0 %	33.33 %	66.67 %	Non-Coding
6059	NC_009525	GGA	2	6	4401565	4401570	33.33 %	0 %	66.67 %	0 %	Non-Coding
6060	NC_009525	TCG	2	6	4401625	4401630	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6061	NC_009525	CGA	2	6	4401829	4401834	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6062	NC_009525	CTA	2	6	4401881	4401886	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
6063	NC_009525	CGT	2	6	4409237	4409242	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6064	NC_009525	CGC	2	6	4409261	4409266	0 %	0 %	33.33 %	66.67 %	Non-Coding
6065	NC_009525	CAG	2	6	4410112	4410117	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6066	NC_009525	CCG	2	6	4416656	4416661	0 %	0 %	33.33 %	66.67 %	Non-Coding
6067	NC_009525	GCG	2	6	4416748	4416753	0 %	0 %	66.67 %	33.33 %	Non-Coding
6068	NC_009525	GGT	2	6	4419458	4419463	0 %	33.33 %	66.67 %	0 %	Non-Coding
6069	NC_009525	GCT	2	6	4419468	4419473	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6070	NC_009525	GCT	2	6	4419612	4419617	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6071	NC_009525	CAC	2	6	4419659	4419664	33.33 %	0 %	0 %	66.67 %	Non-Coding
6072	NC_009525	AAC	2	6	4419672	4419677	66.67 %	0 %	0 %	33.33 %	Non-Coding
6073	NC_009525	CAA	2	6	4419912	4419917	66.67 %	0 %	0 %	33.33 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.