MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Repeats of Mycobacterium tuberculosis H37Ra chromosome

Total Repeats: 83600

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
83501	NC_009525	CGC	2	6	4413198	4413203	0 %	0 %	33.33 %	66.67 %	148663783
83502	NC_009525	GTC	2	6	4413250	4413255	0 %	33.33 %	33.33 %	33.33 %	148663783
83503	NC_009525	AGC	2	6	4413290	4413295	33.33 %	0 %	33.33 %	33.33 %	148663783
83504	NC_009525	CCG	2	6	4413303	4413308	0 %	0 %	33.33 %	66.67 %	148663783
83505	NC_009525	GGT	2	6	4413383	4413388	0 %	33.33 %	66.67 %	0 %	148663783
83506	NC_009525	GGT	2	6	4413498	4413503	0 %	33.33 %	66.67 %	0 %	148663783
83507	NC_009525	GCT	2	6	4413567	4413572	0 %	33.33 %	33.33 %	33.33 %	148663783
83508	NC_009525	TCA	2	6	4413946	4413951	33.33 %	33.33 %	0 %	33.33 %	148663784
83509	NC_009525	ATC	2	6	4413971	4413976	33.33 %	33.33 %	0 %	33.33 %	148663784
83510	NC_009525	CCA	2	6	4413991	4413996	33.33 %	0 %	0 %	66.67 %	148663784
83511	NC_009525	GGT	2	6	4414046	4414051	0 %	33.33 %	66.67 %	0 %	148663784
83512	NC_009525	CGC	2	6	4414101	4414106	0 %	0 %	33.33 %	66.67 %	148663784
83513	NC_009525	GGC	2	6	4414107	4414112	0 %	0 %	66.67 %	33.33 %	148663784
83514	NC_009525	CGA	2	6	4414210	4414215	33.33 %	0 %	33.33 %	33.33 %	148663784
83515	NC_009525	CTC	2	6	4414229	4414234	0 %	33.33 %	0 %	66.67 %	148663784
83516	NC_009525	CAG	2	6	4414262	4414267	33.33 %	0 %	33.33 %	33.33 %	148663784
83517	NC_009525	CGG	2	6	4414297	4414302	0 %	0 %	66.67 %	33.33 %	148663784
83518	NC_009525	CGC	2	6	4414308	4414313	0 %	0 %	33.33 %	66.67 %	148663784
83519	NC_009525	TCG	2	6	4414413	4414418	0 %	33.33 %	33.33 %	33.33 %	148663784
83520	NC_009525	GCC	2	6	4414434	4414439	0 %	0 %	33.33 %	66.67 %	148663784
83521	NC_009525	CTT	2	6	4414441	4414446	0 %	66.67 %	0 %	33.33 %	148663784
83522	NC_009525	AGG	2	6	4414482	4414487	33.33 %	0 %	66.67 %	0 %	148663784
83523	NC_009525	GCA	2	6	4414495	4414500	33.33 %	0 %	33.33 %	33.33 %	148663784
83524	NC_009525	TCG	2	6	4414506	4414511	0 %	33.33 %	33.33 %	33.33 %	148663784
83525	NC_009525	TGG	2	6	4414537	4414542	0 %	33.33 %	66.67 %	0 %	148663784
83526	NC_009525	CAC	2	6	4414631	4414636	33.33 %	0 %	0 %	66.67 %	148663784
83527	NC_009525	TCG	2	6	4414695	4414700	0 %	33.33 %	33.33 %	33.33 %	148663784
83528	NC_009525	CCG	2	6	4414794	4414799	0 %	0 %	33.33 %	66.67 %	148663784
83529	NC_009525	GTC	2	6	4414938	4414943	0 %	33.33 %	33.33 %	33.33 %	148663785
83530	NC_009525	TGG	2	6	4414954	4414959	0 %	33.33 %	66.67 %	0 %	148663785
83531	NC_009525	GAT	2	6	4415032	4415037	33.33 %	33.33 %	33.33 %	0 %	148663785
83532	NC_009525	TCG	2	6	4415126	4415131	0 %	33.33 %	33.33 %	33.33 %	148663785
83533	NC_009525	GGT	2	6	4415182	4415187	0 %	33.33 %	66.67 %	0 %	148663785
83534	NC_009525	GTA	2	6	4415263	4415268	33.33 %	33.33 %	33.33 %	0 %	148663785
83535	NC_009525	ATC	2	6	4415285	4415290	33.33 %	33.33 %	0 %	33.33 %	148663785
83536	NC_009525	CGA	2	6	4415304	4415309	33.33 %	0 %	33.33 %	33.33 %	148663785
83537	NC_009525	CAG	2	6	4415323	4415328	33.33 %	0 %	33.33 %	33.33 %	148663785
83538	NC_009525	CGA	2	6	4415349	4415354	33.33 %	0 %	33.33 %	33.33 %	148663785
83539	NC_009525	CCA	2	6	4415418	4415423	33.33 %	0 %	0 %	66.67 %	148663785
83540	NC_009525	CGG	2	6	4415670	4415675	0 %	0 %	66.67 %	33.33 %	148663785
83541	NC_009525	GTC	2	6	4415678	4415683	0 %	33.33 %	33.33 %	33.33 %	148663785
83542	NC_009525	CTG	2	6	4415784	4415789	0 %	33.33 %	33.33 %	33.33 %	148663785
83543	NC_009525	TCG	2	6	4415841	4415846	0 %	33.33 %	33.33 %	33.33 %	148663785
83544	NC_009525	CGT	2	6	4416028	4416033	0 %	33.33 %	33.33 %	33.33 %	148663786
83545	NC_009525	CAC	2	6	4416081	4416086	33.33 %	0 %	0 %	66.67 %	148663786
83546	NC_009525	ATC	2	6	4416112	4416117	33.33 %	33.33 %	0 %	33.33 %	148663786
83547	NC_009525	TCG	2	6	4416139	4416144	0 %	33.33 %	33.33 %	33.33 %	148663786
83548	NC_009525	GCC	2	6	4416258	4416263	0 %	0 %	33.33 %	66.67 %	148663786
83549	NC_009525	CTC	2	6	4416285	4416290	0 %	33.33 %	0 %	66.67 %	148663786
83550	NC_009525	GAA	2	6	4416344	4416349	66.67 %	0 %	33.33 %	0 %	148663786
83551	NC_009525	GCG	2	6	4416357	4416362	0 %	0 %	66.67 %	33.33 %	148663786
83552	NC_009525	GAG	2	6	4416471	4416476	33.33 %	0 %	66.67 %	0 %	148663786
83553	NC_009525	CCA	2	6	4416539	4416544	33.33 %	0 %	0 %	66.67 %	148663786
83554	NC_009525	CCG	2	6	4416585	4416590	0 %	0 %	33.33 %	66.67 %	148663786
83555	NC_009525	CGC	2	6	4416624	4416629	0 %	0 %	33.33 %	66.67 %	148663786
83556	NC_009525	CCG	2	6	4416656	4416661	0 %	0 %	33.33 %	66.67 %	Non-Coding
83557	NC_009525	GCG	2	6	4416748	4416753	0 %	0 %	66.67 %	33.33 %	Non-Coding
83558	NC_009525	CGC	2	6	4416930	4416935	0 %	0 %	33.33 %	66.67 %	148663787
83559	NC_009525	TCG	2	6	4416942	4416947	0 %	33.33 %	33.33 %	33.33 %	148663787
83560	NC_009525	GCC	2	6	4416954	4416959	0 %	0 %	33.33 %	66.67 %	148663787
83561	NC_009525	TCC	2	6	4416963	4416968	0 %	33.33 %	0 %	66.67 %	148663787
83562	NC_009525	GCC	2	6	4416973	4416978	0 %	0 %	33.33 %	66.67 %	148663787
83563	NC_009525	TCT	2	6	4417024	4417029	0 %	66.67 %	0 %	33.33 %	148663787
83564	NC_009525	GTC	2	6	4417103	4417108	0 %	33.33 %	33.33 %	33.33 %	148663787
83565	NC_009525	CAC	2	6	4417124	4417129	33.33 %	0 %	0 %	66.67 %	148663787
83566	NC_009525	TCG	2	6	4417245	4417250	0 %	33.33 %	33.33 %	33.33 %	148663787
83567	NC_009525	TCC	2	6	4417275	4417280	0 %	33.33 %	0 %	66.67 %	148663787
83568	NC_009525	GGT	2	6	4417322	4417327	0 %	33.33 %	66.67 %	0 %	148663787
83569	NC_009525	GCC	2	6	4417634	4417639	0 %	0 %	33.33 %	66.67 %	148663788
83570	NC_009525	CCT	2	6	4417653	4417658	0 %	33.33 %	0 %	66.67 %	148663788
83571	NC_009525	CCT	4	12	4417668	4417679	0 %	33.33 %	0 %	66.67 %	148663788
83572	NC_009525	TGC	3	9	4417703	4417711	0 %	33.33 %	33.33 %	33.33 %	148663788
83573	NC_009525	GAT	2	6	4417747	4417752	33.33 %	33.33 %	33.33 %	0 %	148663788
83574	NC_009525	CCG	2	6	4417772	4417777	0 %	0 %	33.33 %	66.67 %	148663788
83575	NC_009525	TCA	2	6	4417818	4417823	33.33 %	33.33 %	0 %	33.33 %	148663788
83576	NC_009525	GCC	2	6	4417844	4417849	0 %	0 %	33.33 %	66.67 %	148663788
83577	NC_009525	ATC	2	6	4417910	4417915	33.33 %	33.33 %	0 %	33.33 %	148663788
83578	NC_009525	CGA	2	6	4417956	4417961	33.33 %	0 %	33.33 %	33.33 %	148663788
83579	NC_009525	TGG	2	6	4418316	4418321	0 %	33.33 %	66.67 %	0 %	148663788
83580	NC_009525	CAG	2	6	4418350	4418355	33.33 %	0 %	33.33 %	33.33 %	148663788
83581	NC_009525	GAA	2	6	4418401	4418406	66.67 %	0 %	33.33 %	0 %	148663788
83582	NC_009525	GTA	2	6	4418470	4418475	33.33 %	33.33 %	33.33 %	0 %	148663788
83583	NC_009525	GAA	2	6	4418491	4418496	66.67 %	0 %	33.33 %	0 %	148663788
83584	NC_009525	GTC	2	6	4418543	4418548	0 %	33.33 %	33.33 %	33.33 %	148663789
83585	NC_009525	TCC	2	6	4418615	4418620	0 %	33.33 %	0 %	66.67 %	148663789
83586	NC_009525	ACG	2	6	4418737	4418742	33.33 %	0 %	33.33 %	33.33 %	148663789
83587	NC_009525	GCG	2	6	4418752	4418757	0 %	0 %	66.67 %	33.33 %	148663789
83588	NC_009525	TGC	2	6	4418909	4418914	0 %	33.33 %	33.33 %	33.33 %	148663790
83589	NC_009525	GCT	2	6	4418941	4418946	0 %	33.33 %	33.33 %	33.33 %	148663790
83590	NC_009525	CAC	2	6	4418962	4418967	33.33 %	0 %	0 %	66.67 %	148663790
83591	NC_009525	CCA	2	6	4419106	4419111	33.33 %	0 %	0 %	66.67 %	148663790
83592	NC_009525	GTT	2	6	4419158	4419163	0 %	66.67 %	33.33 %	0 %	148663790
83593	NC_009525	CGC	2	6	4419331	4419336	0 %	0 %	33.33 %	66.67 %	148663791
83594	NC_009525	GTT	2	6	4419339	4419344	0 %	66.67 %	33.33 %	0 %	148663791
83595	NC_009525	GGT	2	6	4419458	4419463	0 %	33.33 %	66.67 %	0 %	Non-Coding
83596	NC_009525	GCT	2	6	4419468	4419473	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
83597	NC_009525	GCT	2	6	4419612	4419617	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
83598	NC_009525	CAC	2	6	4419659	4419664	33.33 %	0 %	0 %	66.67 %	Non-Coding
83599	NC_009525	AAC	2	6	4419672	4419677	66.67 %	0 %	0 %	33.33 %	Non-Coding
83600	NC_009525	CAA	2	6	4419912	4419917	66.67 %	0 %	0 %	33.33 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.