MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Thermotoga petrophila RKU-1 chromosome

Total Repeats: 25

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009486	TAAAAA	2	12	138170	138181	83.33 %	16.67 %	0 %	0 %	Non-Coding
2	NC_009486	TTTTGT	2	12	163449	163460	0 %	83.33 %	16.67 %	0 %	Non-Coding
3	NC_009486	TTTCAC	2	12	295584	295595	16.67 %	50 %	0 %	33.33 %	Non-Coding
4	NC_009486	AATATA	2	12	403304	403315	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_009486	GCAACA	2	12	403695	403706	50 %	0 %	16.67 %	33.33 %	Non-Coding
6	NC_009486	ACTTTT	2	12	515690	515701	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
7	NC_009486	AAGGGG	2	12	666149	666160	33.33 %	0 %	66.67 %	0 %	Non-Coding
8	NC_009486	TTCCCC	2	12	666161	666172	0 %	33.33 %	0 %	66.67 %	Non-Coding
9	NC_009486	CGAGCC	2	12	753633	753644	16.67 %	0 %	33.33 %	50 %	Non-Coding
10	NC_009486	TGCAAA	2	12	813068	813079	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
11	NC_009486	AAGAAA	2	12	1053876	1053887	83.33 %	0 %	16.67 %	0 %	Non-Coding
12	NC_009486	GGACGG	2	12	1071684	1071695	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
13	NC_009486	GTACAA	2	12	1107065	1107076	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
14	NC_009486	TGTTTT	2	12	1147817	1147828	0 %	83.33 %	16.67 %	0 %	Non-Coding
15	NC_009486	AGCATG	2	12	1224239	1224250	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
16	NC_009486	CGAGGA	2	12	1322431	1322442	33.33 %	0 %	50 %	16.67 %	Non-Coding
17	NC_009486	TATAAC	2	12	1439740	1439751	50 %	33.33 %	0 %	16.67 %	Non-Coding
18	NC_009486	AATAAG	2	12	1463427	1463438	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
19	NC_009486	CGAATT	2	12	1543066	1543077	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
20	NC_009486	TTGAAA	2	12	1631147	1631158	50 %	33.33 %	16.67 %	0 %	Non-Coding
21	NC_009486	CGAGGA	2	12	1644186	1644197	33.33 %	0 %	50 %	16.67 %	Non-Coding
22	NC_009486	TGGAAA	2	12	1724743	1724754	50 %	16.67 %	33.33 %	0 %	Non-Coding
23	NC_009486	GCTGGT	2	12	1725816	1725827	0 %	33.33 %	50 %	16.67 %	Non-Coding
24	NC_009486	TCTGTT	2	12	1735513	1735524	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
25	NC_009486	TGGGGG	2	12	1784451	1784462	0 %	16.67 %	83.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.