Penta-nucleotide Coding Repeats of Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid pCM2
Total Repeats: 48
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_009479 | GCCCG | 2 | 10 | 1276 | 1285 | 0 % | 0 % | 40 % | 60 % | 148271111 |
2 | NC_009479 | CGCGC | 2 | 10 | 1370 | 1379 | 0 % | 0 % | 40 % | 60 % | 148271111 |
3 | NC_009479 | CGCCA | 2 | 10 | 4853 | 4862 | 20 % | 0 % | 20 % | 60 % | 148271116 |
4 | NC_009479 | CGGGA | 2 | 10 | 5244 | 5253 | 20 % | 0 % | 60 % | 20 % | 148271116 |
5 | NC_009479 | CCGCG | 2 | 10 | 5994 | 6003 | 0 % | 0 % | 40 % | 60 % | 148271117 |
6 | NC_009479 | GCTCG | 2 | 10 | 9029 | 9038 | 0 % | 20 % | 40 % | 40 % | 148271122 |
7 | NC_009479 | CGCGA | 2 | 10 | 9775 | 9784 | 20 % | 0 % | 40 % | 40 % | 148271123 |
8 | NC_009479 | TCCCC | 2 | 10 | 10277 | 10286 | 0 % | 20 % | 0 % | 80 % | 148271123 |
9 | NC_009479 | CGCGT | 2 | 10 | 12400 | 12409 | 0 % | 20 % | 40 % | 40 % | 148271123 |
10 | NC_009479 | TGCGC | 2 | 10 | 15185 | 15194 | 0 % | 20 % | 40 % | 40 % | 148271125 |
11 | NC_009479 | TCGGG | 2 | 10 | 16019 | 16028 | 0 % | 20 % | 60 % | 20 % | 148271125 |
12 | NC_009479 | GGAGC | 2 | 10 | 20183 | 20192 | 20 % | 0 % | 60 % | 20 % | 148271130 |
13 | NC_009479 | GATGA | 2 | 10 | 20706 | 20715 | 40 % | 20 % | 40 % | 0 % | 148271130 |
14 | NC_009479 | GTGGA | 2 | 10 | 21026 | 21035 | 20 % | 20 % | 60 % | 0 % | 148271131 |
15 | NC_009479 | CCTGT | 2 | 10 | 22169 | 22178 | 0 % | 40 % | 20 % | 40 % | 148271131 |
16 | NC_009479 | CACCC | 2 | 10 | 22383 | 22392 | 20 % | 0 % | 0 % | 80 % | 148271131 |
17 | NC_009479 | GTCCA | 2 | 10 | 23581 | 23590 | 20 % | 20 % | 20 % | 40 % | 148271132 |
18 | NC_009479 | CCTGC | 2 | 10 | 23820 | 23829 | 0 % | 20 % | 20 % | 60 % | 148271133 |
19 | NC_009479 | GCGCC | 2 | 10 | 24788 | 24797 | 0 % | 0 % | 40 % | 60 % | 148271134 |
20 | NC_009479 | GGTGC | 2 | 10 | 25697 | 25706 | 0 % | 20 % | 60 % | 20 % | 148271136 |
21 | NC_009479 | GCGAA | 2 | 10 | 26188 | 26197 | 40 % | 0 % | 40 % | 20 % | 148271136 |
22 | NC_009479 | CCCGC | 2 | 10 | 26345 | 26354 | 0 % | 0 % | 20 % | 80 % | 148271136 |
23 | NC_009479 | GCGCG | 2 | 10 | 28595 | 28604 | 0 % | 0 % | 60 % | 40 % | 148271138 |
24 | NC_009479 | CTGCG | 2 | 10 | 28890 | 28899 | 0 % | 20 % | 40 % | 40 % | 148271138 |
25 | NC_009479 | GGCGC | 2 | 10 | 30410 | 30419 | 0 % | 0 % | 60 % | 40 % | 148271140 |
26 | NC_009479 | CGCGG | 2 | 10 | 31504 | 31513 | 0 % | 0 % | 60 % | 40 % | 148271140 |
27 | NC_009479 | AGCGC | 2 | 10 | 32416 | 32425 | 20 % | 0 % | 40 % | 40 % | 148271141 |
28 | NC_009479 | AAGCG | 2 | 10 | 34280 | 34289 | 40 % | 0 % | 40 % | 20 % | 148271143 |
29 | NC_009479 | CCAGC | 2 | 10 | 35730 | 35739 | 20 % | 0 % | 20 % | 60 % | 148271143 |
30 | NC_009479 | GGCGG | 2 | 10 | 41898 | 41907 | 0 % | 0 % | 80 % | 20 % | 148271147 |
31 | NC_009479 | TCAGC | 2 | 10 | 43391 | 43400 | 20 % | 20 % | 20 % | 40 % | 148271149 |
32 | NC_009479 | CACGT | 2 | 10 | 44759 | 44768 | 20 % | 20 % | 20 % | 40 % | 148271150 |
33 | NC_009479 | GCTTC | 2 | 10 | 45675 | 45684 | 0 % | 40 % | 20 % | 40 % | 148271151 |
34 | NC_009479 | GCCCG | 2 | 10 | 46336 | 46345 | 0 % | 0 % | 40 % | 60 % | 148271152 |
35 | NC_009479 | CCGCA | 2 | 10 | 46504 | 46513 | 20 % | 0 % | 20 % | 60 % | 148271152 |
36 | NC_009479 | GGCAC | 2 | 10 | 46861 | 46870 | 20 % | 0 % | 40 % | 40 % | 148271153 |
37 | NC_009479 | CGCAG | 2 | 10 | 48953 | 48962 | 20 % | 0 % | 40 % | 40 % | 148271156 |
38 | NC_009479 | GCAGA | 2 | 10 | 49802 | 49811 | 40 % | 0 % | 40 % | 20 % | 148271157 |
39 | NC_009479 | CTCAT | 2 | 10 | 55513 | 55522 | 20 % | 40 % | 0 % | 40 % | 148271162 |
40 | NC_009479 | CTCTG | 2 | 10 | 61483 | 61492 | 0 % | 40 % | 20 % | 40 % | 148271164 |
41 | NC_009479 | TGCGT | 2 | 10 | 61510 | 61519 | 0 % | 40 % | 40 % | 20 % | 148271164 |
42 | NC_009479 | CGTCA | 2 | 10 | 62036 | 62045 | 20 % | 20 % | 20 % | 40 % | 148271164 |
43 | NC_009479 | CCACG | 2 | 10 | 63369 | 63378 | 20 % | 0 % | 20 % | 60 % | 148271165 |
44 | NC_009479 | GGACG | 2 | 10 | 64994 | 65003 | 20 % | 0 % | 60 % | 20 % | 148271167 |
45 | NC_009479 | CGCAG | 2 | 10 | 67671 | 67680 | 20 % | 0 % | 40 % | 40 % | 148271173 |
46 | NC_009479 | CGGCG | 2 | 10 | 68516 | 68525 | 0 % | 0 % | 60 % | 40 % | 148271174 |
47 | NC_009479 | CGGGC | 2 | 10 | 69557 | 69566 | 0 % | 0 % | 60 % | 40 % | 148271176 |
48 | NC_009479 | TCTGA | 2 | 10 | 69703 | 69712 | 20 % | 40 % | 20 % | 20 % | 148271177 |