Tetra-nucleotide Repeats of Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid pCM1
Total Repeats: 92
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_009478 | CAGC | 2 | 8 | 885 | 892 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
2 | NC_009478 | CCGT | 2 | 8 | 905 | 912 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
3 | NC_009478 | GCCG | 2 | 8 | 1019 | 1026 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
4 | NC_009478 | CCGA | 2 | 8 | 1182 | 1189 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
5 | NC_009478 | GGGT | 2 | 8 | 1301 | 1308 | 0 % | 25 % | 75 % | 0 % | 148245184 |
6 | NC_009478 | GTCC | 2 | 8 | 1372 | 1379 | 0 % | 25 % | 25 % | 50 % | 148245184 |
7 | NC_009478 | TCGC | 2 | 8 | 1555 | 1562 | 0 % | 25 % | 25 % | 50 % | 148245185 |
8 | NC_009478 | GTTA | 2 | 8 | 1892 | 1899 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
9 | NC_009478 | GTAG | 2 | 8 | 1953 | 1960 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
10 | NC_009478 | GGAA | 2 | 8 | 2719 | 2726 | 50 % | 0 % | 50 % | 0 % | 148245186 |
11 | NC_009478 | TCGT | 2 | 8 | 3154 | 3161 | 0 % | 50 % | 25 % | 25 % | 148245188 |
12 | NC_009478 | TCGC | 2 | 8 | 3286 | 3293 | 0 % | 25 % | 25 % | 50 % | 148245188 |
13 | NC_009478 | CGGG | 2 | 8 | 3386 | 3393 | 0 % | 0 % | 75 % | 25 % | 148245188 |
14 | NC_009478 | GGTG | 2 | 8 | 3623 | 3630 | 0 % | 25 % | 75 % | 0 % | 148245188 |
15 | NC_009478 | TGCG | 2 | 8 | 4298 | 4305 | 0 % | 25 % | 50 % | 25 % | 148245188 |
16 | NC_009478 | GCTG | 2 | 8 | 4569 | 4576 | 0 % | 25 % | 50 % | 25 % | 148245188 |
17 | NC_009478 | TCCC | 2 | 8 | 4621 | 4628 | 0 % | 25 % | 0 % | 75 % | 148245188 |
18 | NC_009478 | TCGC | 2 | 8 | 4723 | 4730 | 0 % | 25 % | 25 % | 50 % | 148245188 |
19 | NC_009478 | CGAG | 2 | 8 | 4766 | 4773 | 25 % | 0 % | 50 % | 25 % | 148245188 |
20 | NC_009478 | GCCG | 2 | 8 | 5142 | 5149 | 0 % | 0 % | 50 % | 50 % | 148245188 |
21 | NC_009478 | TCGA | 2 | 8 | 5847 | 5854 | 25 % | 25 % | 25 % | 25 % | 148245189 |
22 | NC_009478 | TGTA | 2 | 8 | 6094 | 6101 | 25 % | 50 % | 25 % | 0 % | 148245189 |
23 | NC_009478 | GGAC | 2 | 8 | 6175 | 6182 | 25 % | 0 % | 50 % | 25 % | 148245190 |
24 | NC_009478 | TCGC | 2 | 8 | 8086 | 8093 | 0 % | 25 % | 25 % | 50 % | 148245192 |
25 | NC_009478 | CCGG | 2 | 8 | 8175 | 8182 | 0 % | 0 % | 50 % | 50 % | 148245192 |
26 | NC_009478 | CACC | 2 | 8 | 8244 | 8251 | 25 % | 0 % | 0 % | 75 % | 148245192 |
27 | NC_009478 | GAGC | 2 | 8 | 8566 | 8573 | 25 % | 0 % | 50 % | 25 % | 148245193 |
28 | NC_009478 | CCAA | 2 | 8 | 8807 | 8814 | 50 % | 0 % | 0 % | 50 % | 148245194 |
29 | NC_009478 | CGCC | 2 | 8 | 8817 | 8824 | 0 % | 0 % | 25 % | 75 % | 148245194 |
30 | NC_009478 | AACG | 2 | 8 | 9196 | 9203 | 50 % | 0 % | 25 % | 25 % | 148245194 |
31 | NC_009478 | GCAG | 2 | 8 | 9537 | 9544 | 25 % | 0 % | 50 % | 25 % | 148245195 |
32 | NC_009478 | GGCA | 2 | 8 | 9971 | 9978 | 25 % | 0 % | 50 % | 25 % | 148245195 |
33 | NC_009478 | CGTT | 2 | 8 | 10370 | 10377 | 0 % | 50 % | 25 % | 25 % | 148245195 |
34 | NC_009478 | AGCA | 2 | 8 | 10813 | 10820 | 50 % | 0 % | 25 % | 25 % | 148245195 |
35 | NC_009478 | GCGA | 2 | 8 | 11390 | 11397 | 25 % | 0 % | 50 % | 25 % | 148245196 |
36 | NC_009478 | GCGG | 2 | 8 | 11690 | 11697 | 0 % | 0 % | 75 % | 25 % | 148245196 |
37 | NC_009478 | CGCC | 2 | 8 | 11777 | 11784 | 0 % | 0 % | 25 % | 75 % | 148245196 |
38 | NC_009478 | CCGG | 2 | 8 | 11956 | 11963 | 0 % | 0 % | 50 % | 50 % | 148245196 |
39 | NC_009478 | TCGC | 2 | 8 | 12312 | 12319 | 0 % | 25 % | 25 % | 50 % | 148245196 |
40 | NC_009478 | GCCG | 2 | 8 | 12495 | 12502 | 0 % | 0 % | 50 % | 50 % | 148245196 |
41 | NC_009478 | GAAG | 2 | 8 | 12509 | 12516 | 50 % | 0 % | 50 % | 0 % | 148245196 |
42 | NC_009478 | CGGA | 2 | 8 | 12747 | 12754 | 25 % | 0 % | 50 % | 25 % | 148245197 |
43 | NC_009478 | CGCC | 2 | 8 | 12792 | 12799 | 0 % | 0 % | 25 % | 75 % | 148245197 |
44 | NC_009478 | ACCG | 2 | 8 | 12862 | 12869 | 25 % | 0 % | 25 % | 50 % | 148245197 |
45 | NC_009478 | GGCC | 2 | 8 | 13471 | 13478 | 0 % | 0 % | 50 % | 50 % | 148245197 |
46 | NC_009478 | CGTC | 2 | 8 | 13728 | 13735 | 0 % | 25 % | 25 % | 50 % | 148245197 |
47 | NC_009478 | ACTG | 2 | 8 | 14091 | 14098 | 25 % | 25 % | 25 % | 25 % | 148245197 |
48 | NC_009478 | CGGC | 2 | 8 | 14411 | 14418 | 0 % | 0 % | 50 % | 50 % | 148245198 |
49 | NC_009478 | GCGG | 2 | 8 | 15293 | 15300 | 0 % | 0 % | 75 % | 25 % | 148245199 |
50 | NC_009478 | GCCG | 2 | 8 | 15943 | 15950 | 0 % | 0 % | 50 % | 50 % | 148245200 |
51 | NC_009478 | GCGG | 2 | 8 | 16028 | 16035 | 0 % | 0 % | 75 % | 25 % | 148245200 |
52 | NC_009478 | GCCG | 2 | 8 | 16284 | 16291 | 0 % | 0 % | 50 % | 50 % | 148245201 |
53 | NC_009478 | GGCC | 2 | 8 | 16335 | 16342 | 0 % | 0 % | 50 % | 50 % | 148245201 |
54 | NC_009478 | GCCG | 2 | 8 | 16398 | 16405 | 0 % | 0 % | 50 % | 50 % | 148245201 |
55 | NC_009478 | ACGC | 2 | 8 | 16408 | 16415 | 25 % | 0 % | 25 % | 50 % | 148245201 |
56 | NC_009478 | CGAC | 2 | 8 | 16718 | 16725 | 25 % | 0 % | 25 % | 50 % | 148245201 |
57 | NC_009478 | TAGG | 2 | 8 | 17423 | 17430 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
58 | NC_009478 | TGCG | 2 | 8 | 17470 | 17477 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
59 | NC_009478 | TGCG | 2 | 8 | 17648 | 17655 | 0 % | 25 % | 50 % | 25 % | 148245203 |
60 | NC_009478 | CCGG | 2 | 8 | 18184 | 18191 | 0 % | 0 % | 50 % | 50 % | 148245203 |
61 | NC_009478 | GTCG | 2 | 8 | 18520 | 18527 | 0 % | 25 % | 50 % | 25 % | 148245203 |
62 | NC_009478 | CAGC | 2 | 8 | 18920 | 18927 | 25 % | 0 % | 25 % | 50 % | 148245203 |
63 | NC_009478 | CCGC | 2 | 8 | 19271 | 19278 | 0 % | 0 % | 25 % | 75 % | 148245203 |
64 | NC_009478 | CCGG | 2 | 8 | 19595 | 19602 | 0 % | 0 % | 50 % | 50 % | 148245203 |
65 | NC_009478 | GACC | 2 | 8 | 19795 | 19802 | 25 % | 0 % | 25 % | 50 % | 148245203 |
66 | NC_009478 | CTCG | 2 | 8 | 21606 | 21613 | 0 % | 25 % | 25 % | 50 % | 148245206 |
67 | NC_009478 | GTTC | 2 | 8 | 22134 | 22141 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
68 | NC_009478 | TCGG | 2 | 8 | 22271 | 22278 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
69 | NC_009478 | CGTT | 2 | 8 | 22426 | 22433 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
70 | NC_009478 | GCGT | 2 | 8 | 22463 | 22470 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
71 | NC_009478 | GAGC | 2 | 8 | 23027 | 23034 | 25 % | 0 % | 50 % | 25 % | 148245207 |
72 | NC_009478 | GCTC | 2 | 8 | 23069 | 23076 | 0 % | 25 % | 25 % | 50 % | 148245207 |
73 | NC_009478 | GTCG | 2 | 8 | 23624 | 23631 | 0 % | 25 % | 50 % | 25 % | 148245208 |
74 | NC_009478 | CCGG | 2 | 8 | 23719 | 23726 | 0 % | 0 % | 50 % | 50 % | 148245208 |
75 | NC_009478 | GCCG | 2 | 8 | 24141 | 24148 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
76 | NC_009478 | GCCG | 2 | 8 | 24299 | 24306 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
77 | NC_009478 | CCGG | 2 | 8 | 25008 | 25015 | 0 % | 0 % | 50 % | 50 % | 148245210 |
78 | NC_009478 | CGAG | 2 | 8 | 25311 | 25318 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
79 | NC_009478 | GCCG | 2 | 8 | 25432 | 25439 | 0 % | 0 % | 50 % | 50 % | 148245211 |
80 | NC_009478 | CGGC | 2 | 8 | 25970 | 25977 | 0 % | 0 % | 50 % | 50 % | 148245211 |
81 | NC_009478 | CGAG | 2 | 8 | 26313 | 26320 | 25 % | 0 % | 50 % | 25 % | 148245211 |
82 | NC_009478 | GCCG | 2 | 8 | 26500 | 26507 | 0 % | 0 % | 50 % | 50 % | 148245211 |
83 | NC_009478 | TCGG | 2 | 8 | 26561 | 26568 | 0 % | 25 % | 50 % | 25 % | 148245211 |
84 | NC_009478 | CGGC | 2 | 8 | 26748 | 26755 | 0 % | 0 % | 50 % | 50 % | 148245211 |
85 | NC_009478 | GCCG | 2 | 8 | 26756 | 26763 | 0 % | 0 % | 50 % | 50 % | 148245211 |
86 | NC_009478 | ACGC | 2 | 8 | 26880 | 26887 | 25 % | 0 % | 25 % | 50 % | 148245211 |
87 | NC_009478 | GCTT | 2 | 8 | 26951 | 26958 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
88 | NC_009478 | TCTG | 2 | 8 | 27022 | 27029 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
89 | NC_009478 | GCAA | 2 | 8 | 27069 | 27076 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
90 | NC_009478 | AAAG | 2 | 8 | 27110 | 27117 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
91 | NC_009478 | GCTC | 3 | 12 | 27272 | 27283 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
92 | NC_009478 | CAGC | 2 | 8 | 27350 | 27357 | 25 % | 0 % | 25 % | 50 % | Non-Coding |