MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Acidiphilium cryptum JF-5 plasmid pACRY04

Total Repeats: 122

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009470	CGG	2	6	5	10	0 %	0 %	66.67 %	33.33 %	Non-Coding
2	NC_009470	GAC	2	6	29	34	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3	NC_009470	ATA	2	6	61	66	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_009470	CAA	2	6	84	89	66.67 %	0 %	0 %	33.33 %	Non-Coding
5	NC_009470	CAA	2	6	114	119	66.67 %	0 %	0 %	33.33 %	Non-Coding
6	NC_009470	GAC	2	6	270	275	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7	NC_009470	ATT	2	6	379	384	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_009470	GAT	2	6	408	413	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
9	NC_009470	CAT	2	6	422	427	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
10	NC_009470	ATT	2	6	498	503	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_009470	ATA	2	6	527	532	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_009470	AAT	2	6	552	557	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_009470	CAA	2	6	578	583	66.67 %	0 %	0 %	33.33 %	Non-Coding
14	NC_009470	ATA	2	6	634	639	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_009470	AAT	2	6	1522	1527	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_009470	TCA	2	6	1534	1539	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_009470	TCA	2	6	1624	1629	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18	NC_009470	TTC	2	6	1668	1673	0 %	66.67 %	0 %	33.33 %	Non-Coding
19	NC_009470	GAA	2	6	1856	1861	66.67 %	0 %	33.33 %	0 %	Non-Coding
20	NC_009470	TTG	2	6	1962	1967	0 %	66.67 %	33.33 %	0 %	Non-Coding
21	NC_009470	TTC	2	6	1985	1990	0 %	66.67 %	0 %	33.33 %	Non-Coding
22	NC_009470	CTG	2	6	2072	2077	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
23	NC_009470	CCA	2	6	2078	2083	33.33 %	0 %	0 %	66.67 %	Non-Coding
24	NC_009470	CAT	2	6	2113	2118	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
25	NC_009470	GTC	2	6	2162	2167	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
26	NC_009470	CAC	2	6	2175	2180	33.33 %	0 %	0 %	66.67 %	Non-Coding
27	NC_009470	GCC	2	6	2185	2190	0 %	0 %	33.33 %	66.67 %	Non-Coding
28	NC_009470	GCC	2	6	2299	2304	0 %	0 %	33.33 %	66.67 %	Non-Coding
29	NC_009470	CGC	2	6	2360	2365	0 %	0 %	33.33 %	66.67 %	Non-Coding
30	NC_009470	CTT	2	6	2369	2374	0 %	66.67 %	0 %	33.33 %	Non-Coding
31	NC_009470	CGC	2	6	2423	2428	0 %	0 %	33.33 %	66.67 %	Non-Coding
32	NC_009470	CTT	2	6	2429	2434	0 %	66.67 %	0 %	33.33 %	Non-Coding
33	NC_009470	GGT	2	6	2462	2467	0 %	33.33 %	66.67 %	0 %	Non-Coding
34	NC_009470	GGC	2	6	2845	2850	0 %	0 %	66.67 %	33.33 %	Non-Coding
35	NC_009470	GTG	2	6	3443	3448	0 %	33.33 %	66.67 %	0 %	Non-Coding
36	NC_009470	TCT	2	6	3481	3486	0 %	66.67 %	0 %	33.33 %	Non-Coding
37	NC_009470	GAA	2	6	3727	3732	66.67 %	0 %	33.33 %	0 %	Non-Coding
38	NC_009470	GGC	2	6	3735	3740	0 %	0 %	66.67 %	33.33 %	Non-Coding
39	NC_009470	GCG	2	6	3784	3789	0 %	0 %	66.67 %	33.33 %	Non-Coding
40	NC_009470	CCG	2	6	3821	3826	0 %	0 %	33.33 %	66.67 %	Non-Coding
41	NC_009470	CAA	2	6	4025	4030	66.67 %	0 %	0 %	33.33 %	Non-Coding
42	NC_009470	CTT	2	6	4046	4051	0 %	66.67 %	0 %	33.33 %	Non-Coding
43	NC_009470	TTC	2	6	4083	4088	0 %	66.67 %	0 %	33.33 %	Non-Coding
44	NC_009470	CGG	2	6	4112	4117	0 %	0 %	66.67 %	33.33 %	Non-Coding
45	NC_009470	GTC	2	6	6625	6630	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
46	NC_009470	CTT	2	6	7032	7037	0 %	66.67 %	0 %	33.33 %	Non-Coding
47	NC_009470	GTT	2	6	9856	9861	0 %	66.67 %	33.33 %	0 %	Non-Coding
48	NC_009470	ATC	2	6	9920	9925	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
49	NC_009470	CTT	2	6	9950	9955	0 %	66.67 %	0 %	33.33 %	Non-Coding
50	NC_009470	AGG	3	9	11278	11286	33.33 %	0 %	66.67 %	0 %	Non-Coding
51	NC_009470	GAT	2	6	11293	11298	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
52	NC_009470	CCG	2	6	11371	11376	0 %	0 %	33.33 %	66.67 %	Non-Coding
53	NC_009470	GGC	2	6	11412	11417	0 %	0 %	66.67 %	33.33 %	Non-Coding
54	NC_009470	CAC	2	6	11445	11450	33.33 %	0 %	0 %	66.67 %	Non-Coding
55	NC_009470	GCG	2	6	11451	11456	0 %	0 %	66.67 %	33.33 %	Non-Coding
56	NC_009470	CAT	2	6	11499	11504	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
57	NC_009470	TTG	2	6	14002	14007	0 %	66.67 %	33.33 %	0 %	Non-Coding
58	NC_009470	GTG	2	6	19732	19737	0 %	33.33 %	66.67 %	0 %	Non-Coding
59	NC_009470	ACC	2	6	21818	21823	33.33 %	0 %	0 %	66.67 %	Non-Coding
60	NC_009470	GCG	2	6	21980	21985	0 %	0 %	66.67 %	33.33 %	Non-Coding
61	NC_009470	CAA	2	6	22004	22009	66.67 %	0 %	0 %	33.33 %	Non-Coding
62	NC_009470	ATC	2	6	22038	22043	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
63	NC_009470	GCC	2	6	22278	22283	0 %	0 %	33.33 %	66.67 %	Non-Coding
64	NC_009470	GGC	2	6	22286	22291	0 %	0 %	66.67 %	33.33 %	Non-Coding
65	NC_009470	GAA	2	6	22435	22440	66.67 %	0 %	33.33 %	0 %	Non-Coding
66	NC_009470	CCG	2	6	24218	24223	0 %	0 %	33.33 %	66.67 %	Non-Coding
67	NC_009470	CGG	2	6	24243	24248	0 %	0 %	66.67 %	33.33 %	Non-Coding
68	NC_009470	AAG	2	6	24340	24345	66.67 %	0 %	33.33 %	0 %	Non-Coding
69	NC_009470	CAT	2	6	25772	25777	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
70	NC_009470	GCC	2	6	25846	25851	0 %	0 %	33.33 %	66.67 %	Non-Coding
71	NC_009470	CGG	2	6	25897	25902	0 %	0 %	66.67 %	33.33 %	Non-Coding
72	NC_009470	GCC	2	6	26249	26254	0 %	0 %	33.33 %	66.67 %	Non-Coding
73	NC_009470	TCC	2	6	28515	28520	0 %	33.33 %	0 %	66.67 %	Non-Coding
74	NC_009470	CAG	2	6	28557	28562	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
75	NC_009470	GAA	2	6	28612	28617	66.67 %	0 %	33.33 %	0 %	Non-Coding
76	NC_009470	TCT	2	6	28702	28707	0 %	66.67 %	0 %	33.33 %	Non-Coding
77	NC_009470	CAA	2	6	28789	28794	66.67 %	0 %	0 %	33.33 %	Non-Coding
78	NC_009470	CCA	2	6	28798	28803	33.33 %	0 %	0 %	66.67 %	Non-Coding
79	NC_009470	CGA	3	9	28819	28827	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
80	NC_009470	CCG	2	6	28839	28844	0 %	0 %	33.33 %	66.67 %	Non-Coding
81	NC_009470	GAC	2	6	28852	28857	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
82	NC_009470	CGC	2	6	29135	29140	0 %	0 %	33.33 %	66.67 %	Non-Coding
83	NC_009470	CTA	2	6	29197	29202	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
84	NC_009470	CTA	2	6	29247	29252	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
85	NC_009470	CCG	2	6	30027	30032	0 %	0 %	33.33 %	66.67 %	Non-Coding
86	NC_009470	CGC	2	6	30086	30091	0 %	0 %	33.33 %	66.67 %	Non-Coding
87	NC_009470	CAG	2	6	30104	30109	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
88	NC_009470	CCA	2	6	30178	30183	33.33 %	0 %	0 %	66.67 %	Non-Coding
89	NC_009470	GAC	2	6	30184	30189	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
90	NC_009470	CCG	2	6	30250	30255	0 %	0 %	33.33 %	66.67 %	Non-Coding
91	NC_009470	TGC	2	6	30320	30325	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
92	NC_009470	ATG	2	6	30384	30389	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
93	NC_009470	CCG	2	6	30403	30408	0 %	0 %	33.33 %	66.67 %	Non-Coding
94	NC_009470	ACC	2	6	35376	35381	33.33 %	0 %	0 %	66.67 %	Non-Coding
95	NC_009470	CGT	2	6	35430	35435	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
96	NC_009470	CGC	2	6	35458	35463	0 %	0 %	33.33 %	66.67 %	Non-Coding
97	NC_009470	CGA	2	6	35552	35557	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
98	NC_009470	GCA	2	6	35604	35609	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
99	NC_009470	GAT	2	6	35644	35649	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
100	NC_009470	ACA	2	6	36163	36168	66.67 %	0 %	0 %	33.33 %	Non-Coding
101	NC_009470	GGA	2	6	36331	36336	33.33 %	0 %	66.67 %	0 %	Non-Coding
102	NC_009470	CGG	2	6	36372	36377	0 %	0 %	66.67 %	33.33 %	Non-Coding
103	NC_009470	CTG	2	6	36381	36386	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
104	NC_009470	ATT	2	6	36418	36423	33.33 %	66.67 %	0 %	0 %	Non-Coding
105	NC_009470	TAC	2	6	36427	36432	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
106	NC_009470	TAT	2	6	36442	36447	33.33 %	66.67 %	0 %	0 %	Non-Coding
107	NC_009470	CGG	2	6	36627	36632	0 %	0 %	66.67 %	33.33 %	Non-Coding
108	NC_009470	CGG	2	6	36682	36687	0 %	0 %	66.67 %	33.33 %	Non-Coding
109	NC_009470	CGC	2	6	36721	36726	0 %	0 %	33.33 %	66.67 %	Non-Coding
110	NC_009470	GAC	2	6	36758	36763	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
111	NC_009470	TGT	2	6	36795	36800	0 %	66.67 %	33.33 %	0 %	Non-Coding
112	NC_009470	GAA	2	6	36838	36843	66.67 %	0 %	33.33 %	0 %	Non-Coding
113	NC_009470	CTG	2	6	36903	36908	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
114	NC_009470	CCA	2	6	36983	36988	33.33 %	0 %	0 %	66.67 %	Non-Coding
115	NC_009470	TCA	2	6	37022	37027	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
116	NC_009470	ACA	2	6	37035	37040	66.67 %	0 %	0 %	33.33 %	Non-Coding
117	NC_009470	TCG	2	6	37041	37046	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
118	NC_009470	ACA	2	6	37122	37127	66.67 %	0 %	0 %	33.33 %	Non-Coding
119	NC_009470	CAG	2	6	37128	37133	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
120	NC_009470	CGG	2	6	37223	37228	0 %	0 %	66.67 %	33.33 %	Non-Coding
121	NC_009470	GGC	2	6	37248	37253	0 %	0 %	66.67 %	33.33 %	Non-Coding
122	NC_009470	GTC	2	6	37389	37394	0 %	33.33 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.