MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Clostridium kluyveri DSM 555 plasmid pCKL555A

Total Repeats: 108

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009466	CTT	2	6	90	95	0 %	66.67 %	0 %	33.33 %	Non-Coding
2	NC_009466	ATA	2	6	101	106	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_009466	TAA	2	6	114	119	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_009466	TTA	2	6	139	144	33.33 %	66.67 %	0 %	0 %	Non-Coding
5	NC_009466	ATA	2	6	178	183	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_009466	TTA	2	6	267	272	33.33 %	66.67 %	0 %	0 %	Non-Coding
7	NC_009466	TTA	2	6	275	280	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_009466	ATA	2	6	324	329	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_009466	TAA	2	6	337	342	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_009466	TAA	2	6	348	353	66.67 %	33.33 %	0 %	0 %	Non-Coding
11	NC_009466	TTA	2	6	371	376	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_009466	CAC	2	6	4006	4011	33.33 %	0 %	0 %	66.67 %	Non-Coding
13	NC_009466	CTC	2	6	4861	4866	0 %	33.33 %	0 %	66.67 %	Non-Coding
14	NC_009466	CTA	2	6	5025	5030	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
15	NC_009466	CTT	2	6	5549	5554	0 %	66.67 %	0 %	33.33 %	Non-Coding
16	NC_009466	TAA	2	6	5568	5573	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_009466	TTA	2	6	5595	5600	33.33 %	66.67 %	0 %	0 %	Non-Coding
18	NC_009466	TTA	2	6	5701	5706	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_009466	AAT	2	6	6021	6026	66.67 %	33.33 %	0 %	0 %	Non-Coding
20	NC_009466	CAA	2	6	6093	6098	66.67 %	0 %	0 %	33.33 %	Non-Coding
21	NC_009466	CAA	2	6	6138	6143	66.67 %	0 %	0 %	33.33 %	Non-Coding
22	NC_009466	TAA	2	6	6179	6184	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_009466	ACC	2	6	6196	6201	33.33 %	0 %	0 %	66.67 %	Non-Coding
24	NC_009466	TCT	2	6	6261	6266	0 %	66.67 %	0 %	33.33 %	Non-Coding
25	NC_009466	CCT	2	6	6325	6330	0 %	33.33 %	0 %	66.67 %	Non-Coding
26	NC_009466	TTC	2	6	7374	7379	0 %	66.67 %	0 %	33.33 %	Non-Coding
27	NC_009466	CTA	2	6	7381	7386	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
28	NC_009466	TAA	2	6	7451	7456	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_009466	ATT	2	6	7844	7849	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_009466	AAT	2	6	8373	8378	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_009466	CAT	2	6	8446	8451	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_009466	ACC	2	6	9301	9306	33.33 %	0 %	0 %	66.67 %	Non-Coding
33	NC_009466	TGT	2	6	14730	14735	0 %	66.67 %	33.33 %	0 %	Non-Coding
34	NC_009466	TTC	2	6	18202	18207	0 %	66.67 %	0 %	33.33 %	Non-Coding
35	NC_009466	CTT	2	6	18211	18216	0 %	66.67 %	0 %	33.33 %	Non-Coding
36	NC_009466	AAT	2	6	18230	18235	66.67 %	33.33 %	0 %	0 %	Non-Coding
37	NC_009466	AGT	2	6	18313	18318	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
38	NC_009466	CCT	2	6	18397	18402	0 %	33.33 %	0 %	66.67 %	Non-Coding
39	NC_009466	TCC	2	6	18600	18605	0 %	33.33 %	0 %	66.67 %	Non-Coding
40	NC_009466	TGT	2	6	18695	18700	0 %	66.67 %	33.33 %	0 %	Non-Coding
41	NC_009466	AGG	2	6	18743	18748	33.33 %	0 %	66.67 %	0 %	Non-Coding
42	NC_009466	TAT	2	6	18749	18754	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_009466	ATC	2	6	19207	19212	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
44	NC_009466	TAA	2	6	19214	19219	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_009466	ATT	2	6	19274	19279	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_009466	ATT	2	6	19311	19316	33.33 %	66.67 %	0 %	0 %	Non-Coding
47	NC_009466	TAA	2	6	20255	20260	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_009466	ATC	2	6	22713	22718	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
49	NC_009466	CTT	2	6	22769	22774	0 %	66.67 %	0 %	33.33 %	Non-Coding
50	NC_009466	GCA	2	6	22788	22793	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51	NC_009466	TGC	2	6	22818	22823	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
52	NC_009466	TAA	2	6	22875	22880	66.67 %	33.33 %	0 %	0 %	Non-Coding
53	NC_009466	TAT	2	6	22881	22886	33.33 %	66.67 %	0 %	0 %	Non-Coding
54	NC_009466	AAT	2	6	22934	22939	66.67 %	33.33 %	0 %	0 %	Non-Coding
55	NC_009466	TCC	2	6	23457	23462	0 %	33.33 %	0 %	66.67 %	Non-Coding
56	NC_009466	ATA	2	6	23469	23474	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_009466	GTG	2	6	23492	23497	0 %	33.33 %	66.67 %	0 %	Non-Coding
58	NC_009466	TCC	2	6	23695	23700	0 %	33.33 %	0 %	66.67 %	Non-Coding
59	NC_009466	TAA	2	6	23769	23774	66.67 %	33.33 %	0 %	0 %	Non-Coding
60	NC_009466	CAT	2	6	23829	23834	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
61	NC_009466	TAA	2	6	23979	23984	66.67 %	33.33 %	0 %	0 %	Non-Coding
62	NC_009466	ATA	2	6	23988	23993	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_009466	TCC	2	6	24797	24802	0 %	33.33 %	0 %	66.67 %	Non-Coding
64	NC_009466	ATT	2	6	25399	25404	33.33 %	66.67 %	0 %	0 %	Non-Coding
65	NC_009466	ACA	2	6	26623	26628	66.67 %	0 %	0 %	33.33 %	Non-Coding
66	NC_009466	GTA	2	6	26644	26649	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
67	NC_009466	TGA	2	6	26772	26777	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
68	NC_009466	GTT	2	6	26831	26836	0 %	66.67 %	33.33 %	0 %	Non-Coding
69	NC_009466	TAC	2	6	26848	26853	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
70	NC_009466	ATC	2	6	27734	27739	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
71	NC_009466	TAA	2	6	28707	28712	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_009466	TAA	3	9	28768	28776	66.67 %	33.33 %	0 %	0 %	Non-Coding
73	NC_009466	TAT	2	6	28840	28845	33.33 %	66.67 %	0 %	0 %	Non-Coding
74	NC_009466	AGG	2	6	28862	28867	33.33 %	0 %	66.67 %	0 %	Non-Coding
75	NC_009466	ATA	2	6	29487	29492	66.67 %	33.33 %	0 %	0 %	Non-Coding
76	NC_009466	TAA	2	6	29523	29528	66.67 %	33.33 %	0 %	0 %	Non-Coding
77	NC_009466	ACC	2	6	29973	29978	33.33 %	0 %	0 %	66.67 %	Non-Coding
78	NC_009466	TTA	2	6	30081	30086	33.33 %	66.67 %	0 %	0 %	Non-Coding
79	NC_009466	ATC	2	6	30183	30188	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
80	NC_009466	GTA	2	6	30214	30219	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
81	NC_009466	TCC	2	6	31057	31062	0 %	33.33 %	0 %	66.67 %	Non-Coding
82	NC_009466	TCC	2	6	31563	31568	0 %	33.33 %	0 %	66.67 %	Non-Coding
83	NC_009466	ATT	2	6	31668	31673	33.33 %	66.67 %	0 %	0 %	Non-Coding
84	NC_009466	CCT	2	6	33006	33011	0 %	33.33 %	0 %	66.67 %	Non-Coding
85	NC_009466	CAT	3	9	33085	33093	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
86	NC_009466	TTA	2	6	33195	33200	33.33 %	66.67 %	0 %	0 %	Non-Coding
87	NC_009466	CCT	2	6	46609	46614	0 %	33.33 %	0 %	66.67 %	Non-Coding
88	NC_009466	ATT	2	6	46660	46665	33.33 %	66.67 %	0 %	0 %	Non-Coding
89	NC_009466	TTA	2	6	46666	46671	33.33 %	66.67 %	0 %	0 %	Non-Coding
90	NC_009466	ATA	2	6	46759	46764	66.67 %	33.33 %	0 %	0 %	Non-Coding
91	NC_009466	CAA	2	6	46765	46770	66.67 %	0 %	0 %	33.33 %	Non-Coding
92	NC_009466	ATT	2	6	46824	46829	33.33 %	66.67 %	0 %	0 %	Non-Coding
93	NC_009466	GTT	2	6	47359	47364	0 %	66.67 %	33.33 %	0 %	Non-Coding
94	NC_009466	TTC	2	6	47376	47381	0 %	66.67 %	0 %	33.33 %	Non-Coding
95	NC_009466	TGT	2	6	47397	47402	0 %	66.67 %	33.33 %	0 %	Non-Coding
96	NC_009466	TAA	2	6	47408	47413	66.67 %	33.33 %	0 %	0 %	Non-Coding
97	NC_009466	TAT	2	6	47817	47822	33.33 %	66.67 %	0 %	0 %	Non-Coding
98	NC_009466	TTG	2	6	50464	50469	0 %	66.67 %	33.33 %	0 %	Non-Coding
99	NC_009466	CAC	2	6	57164	57169	33.33 %	0 %	0 %	66.67 %	Non-Coding
100	NC_009466	ATT	2	6	57193	57198	33.33 %	66.67 %	0 %	0 %	Non-Coding
101	NC_009466	ATT	2	6	57236	57241	33.33 %	66.67 %	0 %	0 %	Non-Coding
102	NC_009466	CAC	2	6	57561	57566	33.33 %	0 %	0 %	66.67 %	Non-Coding
103	NC_009466	ATT	2	6	58225	58230	33.33 %	66.67 %	0 %	0 %	Non-Coding
104	NC_009466	TCT	2	6	58240	58245	0 %	66.67 %	0 %	33.33 %	Non-Coding
105	NC_009466	TCT	2	6	58398	58403	0 %	66.67 %	0 %	33.33 %	Non-Coding
106	NC_009466	ATT	2	6	59029	59034	33.33 %	66.67 %	0 %	0 %	Non-Coding
107	NC_009466	ACT	2	6	59110	59115	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
108	NC_009466	AGT	2	6	59147	59152	33.33 %	33.33 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.