MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Vibrio cholerae O395 chromosome 1

Total Repeats: 29

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009456	AGAAAA	2	12	38863	38874	83.33 %	0 %	16.67 %	0 %	Non-Coding
2	NC_009456	AATATG	2	12	104387	104398	50 %	33.33 %	16.67 %	0 %	Non-Coding
3	NC_009456	ATACCG	2	12	144378	144389	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
4	NC_009456	AGCGGA	2	12	185498	185509	33.33 %	0 %	50 %	16.67 %	Non-Coding
5	NC_009456	CATTTT	2	12	196928	196939	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
6	NC_009456	TTGTTT	2	12	198216	198227	0 %	83.33 %	16.67 %	0 %	Non-Coding
7	NC_009456	AATTTT	2	12	209157	209168	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_009456	TTTTAA	2	12	230481	230492	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_009456	TTTCTA	2	12	238541	238552	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
10	NC_009456	TTGTGA	2	12	284417	284428	16.67 %	50 %	33.33 %	0 %	Non-Coding
11	NC_009456	CAATAA	2	12	380078	380089	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
12	NC_009456	TTAATT	2	12	392676	392687	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_009456	TAGTGG	2	12	536475	536486	16.67 %	33.33 %	50 %	0 %	Non-Coding
14	NC_009456	CGTTCT	2	12	563144	563155	0 %	50 %	16.67 %	33.33 %	Non-Coding
15	NC_009456	TGGTTA	2	12	644926	644937	16.67 %	50 %	33.33 %	0 %	Non-Coding
16	NC_009456	GATCAA	2	12	653341	653352	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
17	NC_009456	CTGAAA	2	12	655002	655013	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
18	NC_009456	AAACTC	2	12	656716	656727	50 %	16.67 %	0 %	33.33 %	Non-Coding
19	NC_009456	AAATAA	2	12	690913	690924	83.33 %	16.67 %	0 %	0 %	Non-Coding
20	NC_009456	CAAATA	2	12	691187	691198	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
21	NC_009456	CCCCCT	2	12	732825	732836	0 %	16.67 %	0 %	83.33 %	Non-Coding
22	NC_009456	GACACT	2	12	746091	746102	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
23	NC_009456	AAAACC	2	12	762928	762939	66.67 %	0 %	0 %	33.33 %	Non-Coding
24	NC_009456	AAAAAC	2	12	820293	820304	83.33 %	0 %	0 %	16.67 %	Non-Coding
25	NC_009456	ACAACC	2	12	867074	867085	50 %	0 %	0 %	50 %	Non-Coding
26	NC_009456	TCCATC	2	12	967395	967406	16.67 %	33.33 %	0 %	50 %	Non-Coding
27	NC_009456	AAAAAT	2	12	1058947	1058958	83.33 %	16.67 %	0 %	0 %	Non-Coding
28	NC_009456	CATCAA	2	12	1064466	1064477	50 %	16.67 %	0 %	33.33 %	Non-Coding
29	NC_009456	TCACTT	2	12	1065666	1065677	16.67 %	50 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.