MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Rhodobacter sphaeroides ATCC 17025 chromosome

Total Repeats: 145

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009428	GGCGGG	2	12	7582	7593	0 %	0 %	83.33 %	16.67 %	Non-Coding
2	NC_009428	TCGGGC	2	12	77109	77120	0 %	16.67 %	50 %	33.33 %	Non-Coding
3	NC_009428	GAAGGC	2	12	103299	103310	33.33 %	0 %	50 %	16.67 %	Non-Coding
4	NC_009428	CGCGGA	2	12	127657	127668	16.67 %	0 %	50 %	33.33 %	Non-Coding
5	NC_009428	CTTGCC	2	12	132978	132989	0 %	33.33 %	16.67 %	50 %	Non-Coding
6	NC_009428	CTCGAC	2	12	160693	160704	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
7	NC_009428	CTCGTT	2	12	167067	167078	0 %	50 %	16.67 %	33.33 %	Non-Coding
8	NC_009428	CATCGG	2	12	169968	169979	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
9	NC_009428	CTCGTT	2	12	170458	170469	0 %	50 %	16.67 %	33.33 %	Non-Coding
10	NC_009428	GCTGCC	2	12	213376	213387	0 %	16.67 %	33.33 %	50 %	Non-Coding
11	NC_009428	CCTTCG	2	12	247351	247362	0 %	33.33 %	16.67 %	50 %	Non-Coding
12	NC_009428	CGGCCC	2	12	276236	276247	0 %	0 %	33.33 %	66.67 %	Non-Coding
13	NC_009428	GCCGCA	2	12	306921	306932	16.67 %	0 %	33.33 %	50 %	Non-Coding
14	NC_009428	GCGGTT	2	12	307533	307544	0 %	33.33 %	50 %	16.67 %	Non-Coding
15	NC_009428	TCGGGG	2	12	310197	310208	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
16	NC_009428	GCCGCG	2	12	310503	310514	0 %	0 %	50 %	50 %	Non-Coding
17	NC_009428	TTGCGG	2	12	310735	310746	0 %	33.33 %	50 %	16.67 %	Non-Coding
18	NC_009428	GGCGAG	2	12	314463	314474	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
19	NC_009428	CCGGCC	2	12	322093	322104	0 %	0 %	33.33 %	66.67 %	Non-Coding
20	NC_009428	CGGCCG	2	12	344583	344594	0 %	0 %	50 %	50 %	Non-Coding
21	NC_009428	GCGGGG	2	12	347716	347727	0 %	0 %	83.33 %	16.67 %	Non-Coding
22	NC_009428	CCGGCC	2	12	355641	355652	0 %	0 %	33.33 %	66.67 %	Non-Coding
23	NC_009428	ACGGCC	2	12	423980	423991	16.67 %	0 %	33.33 %	50 %	Non-Coding
24	NC_009428	GCCTCG	2	12	480573	480584	0 %	16.67 %	33.33 %	50 %	Non-Coding
25	NC_009428	CTCTTG	2	12	576598	576609	0 %	50 %	16.67 %	33.33 %	Non-Coding
26	NC_009428	GCCCTT	2	12	633801	633812	0 %	33.33 %	16.67 %	50 %	Non-Coding
27	NC_009428	GGATGA	2	12	665270	665281	33.33 %	16.67 %	50 %	0 %	Non-Coding
28	NC_009428	TCTGCC	2	12	674494	674505	0 %	33.33 %	16.67 %	50 %	Non-Coding
29	NC_009428	CAGCTC	2	12	745350	745361	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
30	NC_009428	TCCAGG	2	12	826927	826938	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
31	NC_009428	GAAGGA	2	12	830806	830817	50 %	0 %	50 %	0 %	Non-Coding
32	NC_009428	CTTGAA	2	12	843233	843244	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
33	NC_009428	AACGAG	2	12	847258	847269	50 %	0 %	33.33 %	16.67 %	Non-Coding
34	NC_009428	GGCGCC	2	12	857174	857185	0 %	0 %	50 %	50 %	Non-Coding
35	NC_009428	AAAGGC	2	12	891258	891269	50 %	0 %	33.33 %	16.67 %	Non-Coding
36	NC_009428	CTCGTT	2	12	893872	893883	0 %	50 %	16.67 %	33.33 %	Non-Coding
37	NC_009428	AAAGGG	2	12	901651	901662	50 %	0 %	50 %	0 %	Non-Coding
38	NC_009428	CCATCA	2	12	961212	961223	33.33 %	16.67 %	0 %	50 %	Non-Coding
39	NC_009428	TGCGGA	2	12	961242	961253	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
40	NC_009428	GCAGGT	2	12	961320	961331	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
41	NC_009428	CCGCAA	2	12	963305	963316	33.33 %	0 %	16.67 %	50 %	Non-Coding
42	NC_009428	CCCCGA	2	12	963843	963854	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
43	NC_009428	TCAACG	2	12	1006061	1006072	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
44	NC_009428	CTTGGG	2	12	1034930	1034941	0 %	33.33 %	50 %	16.67 %	Non-Coding
45	NC_009428	TTCCGA	2	12	1036799	1036810	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
46	NC_009428	AGGTTC	2	12	1071925	1071936	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
47	NC_009428	GGCCGC	2	12	1099145	1099156	0 %	0 %	50 %	50 %	Non-Coding
48	NC_009428	GGCCGG	2	12	1197017	1197028	0 %	0 %	66.67 %	33.33 %	Non-Coding
49	NC_009428	CAGGCG	2	12	1199661	1199672	16.67 %	0 %	50 %	33.33 %	Non-Coding
50	NC_009428	GTCATC	2	12	1258315	1258326	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
51	NC_009428	GTCGGG	2	12	1264382	1264393	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
52	NC_009428	GCCCCG	2	12	1276700	1276711	0 %	0 %	33.33 %	66.67 %	Non-Coding
53	NC_009428	TGCCGC	2	12	1276713	1276724	0 %	16.67 %	33.33 %	50 %	Non-Coding
54	NC_009428	CGGCAA	2	12	1310230	1310241	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
55	NC_009428	CGAACA	2	12	1350908	1350919	50 %	0 %	16.67 %	33.33 %	Non-Coding
56	NC_009428	GCTACA	2	12	1352301	1352312	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
57	NC_009428	CACCTC	2	12	1356918	1356929	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
58	NC_009428	CCCTTG	2	12	1357459	1357470	0 %	33.33 %	16.67 %	50 %	Non-Coding
59	NC_009428	AACGAG	2	12	1360208	1360219	50 %	0 %	33.33 %	16.67 %	Non-Coding
60	NC_009428	TCAGGA	2	12	1360602	1360613	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
61	NC_009428	GGGGCT	2	12	1381922	1381933	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
62	NC_009428	CGATGC	2	12	1381994	1382005	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
63	NC_009428	TCTGGA	2	12	1462574	1462585	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
64	NC_009428	CGTGGT	2	12	1467668	1467679	0 %	33.33 %	50 %	16.67 %	Non-Coding
65	NC_009428	GCTCCC	2	12	1469661	1469672	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
66	NC_009428	AAACGA	2	12	1550350	1550361	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
67	NC_009428	CCGTCC	2	12	1568482	1568493	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
68	NC_009428	CGTCCG	2	12	1574544	1574555	0 %	16.67 %	33.33 %	50 %	Non-Coding
69	NC_009428	AGCCGC	2	12	1599436	1599447	16.67 %	0 %	33.33 %	50 %	Non-Coding
70	NC_009428	AGGTCC	2	12	1600214	1600225	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
71	NC_009428	CCCGCG	2	12	1600504	1600515	0 %	0 %	33.33 %	66.67 %	Non-Coding
72	NC_009428	CGGCCC	2	12	1615608	1615619	0 %	0 %	33.33 %	66.67 %	Non-Coding
73	NC_009428	CGGCGC	2	12	1628062	1628073	0 %	0 %	50 %	50 %	Non-Coding
74	NC_009428	GGCAGC	2	12	1776686	1776697	16.67 %	0 %	50 %	33.33 %	Non-Coding
75	NC_009428	CGTCAT	2	12	1777358	1777369	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
76	NC_009428	TCGTGG	2	12	1781539	1781550	0 %	33.33 %	50 %	16.67 %	Non-Coding
77	NC_009428	CCTGAG	2	12	1791410	1791421	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
78	NC_009428	CCTCGC	2	12	1803364	1803375	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
79	NC_009428	CACCCG	2	12	1835405	1835416	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
80	NC_009428	TGCCGG	2	12	1848364	1848375	0 %	16.67 %	50 %	33.33 %	Non-Coding
81	NC_009428	AACGAG	2	12	1850400	1850411	50 %	0 %	33.33 %	16.67 %	Non-Coding
82	NC_009428	AACGAG	2	12	1859042	1859053	50 %	0 %	33.33 %	16.67 %	Non-Coding
83	NC_009428	CTCGTT	2	12	1861739	1861750	0 %	50 %	16.67 %	33.33 %	Non-Coding
84	NC_009428	CCGCAA	2	12	1872600	1872611	33.33 %	0 %	16.67 %	50 %	Non-Coding
85	NC_009428	CCCCGA	2	12	1873138	1873149	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
86	NC_009428	CGTGAC	2	12	1875592	1875603	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
87	NC_009428	AGGAAG	2	12	1920639	1920650	50 %	0 %	50 %	0 %	Non-Coding
88	NC_009428	CCATCC	2	12	1944243	1944254	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
89	NC_009428	GGCCGG	2	12	1944257	1944268	0 %	0 %	66.67 %	33.33 %	Non-Coding
90	NC_009428	CTTCAT	2	12	1945725	1945736	16.67 %	50 %	0 %	33.33 %	Non-Coding
91	NC_009428	CCCTCT	2	12	1948084	1948095	0 %	33.33 %	0 %	66.67 %	Non-Coding
92	NC_009428	CCGGCT	2	12	1984912	1984923	0 %	16.67 %	33.33 %	50 %	Non-Coding
93	NC_009428	CTCTCC	2	12	1988645	1988656	0 %	33.33 %	0 %	66.67 %	Non-Coding
94	NC_009428	CCGGCG	2	12	2020060	2020071	0 %	0 %	50 %	50 %	Non-Coding
95	NC_009428	GGGCCG	2	12	2062654	2062665	0 %	0 %	66.67 %	33.33 %	Non-Coding
96	NC_009428	GCGCGG	2	12	2069295	2069306	0 %	0 %	66.67 %	33.33 %	Non-Coding
97	NC_009428	TGTTCG	2	12	2121946	2121957	0 %	50 %	33.33 %	16.67 %	Non-Coding
98	NC_009428	CCGCAA	2	12	2162929	2162940	33.33 %	0 %	16.67 %	50 %	Non-Coding
99	NC_009428	CCCCGA	2	12	2163467	2163478	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
100	NC_009428	CCGCAG	2	12	2212401	2212412	16.67 %	0 %	33.33 %	50 %	Non-Coding
101	NC_009428	CGGGCG	2	12	2246874	2246885	0 %	0 %	66.67 %	33.33 %	Non-Coding
102	NC_009428	CCTCCC	2	12	2256957	2256968	0 %	16.67 %	0 %	83.33 %	Non-Coding
103	NC_009428	CCCTTG	2	12	2263523	2263534	0 %	33.33 %	16.67 %	50 %	Non-Coding
104	NC_009428	CCGCGC	2	12	2312710	2312721	0 %	0 %	33.33 %	66.67 %	Non-Coding
105	NC_009428	ACGTCA	2	12	2329428	2329439	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
106	NC_009428	CGAAAA	2	12	2345235	2345246	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
107	NC_009428	GCAGGA	2	12	2345858	2345869	33.33 %	0 %	50 %	16.67 %	Non-Coding
108	NC_009428	TACTTG	2	12	2346363	2346374	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
109	NC_009428	GGAAGC	2	12	2346950	2346961	33.33 %	0 %	50 %	16.67 %	Non-Coding
110	NC_009428	CCAGCG	2	12	2384058	2384069	16.67 %	0 %	33.33 %	50 %	Non-Coding
111	NC_009428	TGACCG	2	12	2396796	2396807	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
112	NC_009428	CGGGAG	2	12	2450270	2450281	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
113	NC_009428	CGCAAG	2	12	2523895	2523906	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
114	NC_009428	CCTTCC	2	12	2538883	2538894	0 %	33.33 %	0 %	66.67 %	Non-Coding
115	NC_009428	CGCGGC	2	12	2595850	2595861	0 %	0 %	50 %	50 %	Non-Coding
116	NC_009428	GATCGG	2	12	2597421	2597432	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
117	NC_009428	CTGTTC	2	12	2622688	2622699	0 %	50 %	16.67 %	33.33 %	Non-Coding
118	NC_009428	GTTCCC	2	12	2637830	2637841	0 %	33.33 %	16.67 %	50 %	Non-Coding
119	NC_009428	TCCCCG	2	12	2644572	2644583	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
120	NC_009428	GGCCGA	2	12	2644592	2644603	16.67 %	0 %	50 %	33.33 %	Non-Coding
121	NC_009428	CGCCCA	2	12	2743171	2743182	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
122	NC_009428	CGCGGG	2	12	2747592	2747603	0 %	0 %	66.67 %	33.33 %	Non-Coding
123	NC_009428	ACCAGC	2	12	2756116	2756127	33.33 %	0 %	16.67 %	50 %	Non-Coding
124	NC_009428	GATCGT	2	12	2800908	2800919	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
125	NC_009428	GCCGGG	2	12	2803758	2803769	0 %	0 %	66.67 %	33.33 %	Non-Coding
126	NC_009428	GAGGGC	2	12	2850237	2850248	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
127	NC_009428	GCGGCA	2	12	2850301	2850312	16.67 %	0 %	50 %	33.33 %	Non-Coding
128	NC_009428	TCGGGT	2	12	2857709	2857720	0 %	33.33 %	50 %	16.67 %	Non-Coding
129	NC_009428	TTTGCA	2	12	2868817	2868828	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
130	NC_009428	AACGAG	2	12	2874089	2874100	50 %	0 %	33.33 %	16.67 %	Non-Coding
131	NC_009428	AGGACC	2	12	2874252	2874263	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
132	NC_009428	TGCGGT	2	12	2876970	2876981	0 %	33.33 %	50 %	16.67 %	Non-Coding
133	NC_009428	TGACTG	2	12	2883359	2883370	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
134	NC_009428	AAGGGC	2	12	2977960	2977971	33.33 %	0 %	50 %	16.67 %	Non-Coding
135	NC_009428	AACGAG	2	12	3025257	3025268	50 %	0 %	33.33 %	16.67 %	Non-Coding
136	NC_009428	CCGCGC	2	12	3042395	3042406	0 %	0 %	33.33 %	66.67 %	Non-Coding
137	NC_009428	CCGAGC	2	12	3080875	3080886	16.67 %	0 %	33.33 %	50 %	Non-Coding
138	NC_009428	ACGAGG	2	12	3081175	3081186	33.33 %	0 %	50 %	16.67 %	Non-Coding
139	NC_009428	GGTGAT	2	12	3081782	3081793	16.67 %	33.33 %	50 %	0 %	Non-Coding
140	NC_009428	CGGCAT	2	12	3082098	3082109	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
141	NC_009428	CCGCGA	2	12	3124504	3124515	16.67 %	0 %	33.33 %	50 %	Non-Coding
142	NC_009428	CCCCTC	2	12	3127509	3127520	0 %	16.67 %	0 %	83.33 %	Non-Coding
143	NC_009428	AGCCCG	2	12	3134893	3134904	16.67 %	0 %	33.33 %	50 %	Non-Coding
144	NC_009428	CCGCGC	2	12	3186959	3186970	0 %	0 %	33.33 %	66.67 %	Non-Coding
145	NC_009428	TGAAAA	2	12	3209540	3209551	66.67 %	16.67 %	16.67 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.