MICAS: Microsatellite Analysis Server 3.0

Tetra-nucleotide Non-Coding Repeats of Yersinia pestis Pestoides F plasmid CD

Total Repeats: 48

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009377	GCTG	2	8	136	143	0 %	25 %	50 %	25 %	Non-Coding
2	NC_009377	AGTG	2	8	1460	1467	25 %	25 %	50 %	0 %	Non-Coding
3	NC_009377	TAAA	2	8	2918	2925	75 %	25 %	0 %	0 %	Non-Coding
4	NC_009377	GCCC	2	8	2967	2974	0 %	0 %	25 %	75 %	Non-Coding
5	NC_009377	AGCG	2	8	3628	3635	25 %	0 %	50 %	25 %	Non-Coding
6	NC_009377	AACA	2	8	4164	4171	75 %	0 %	0 %	25 %	Non-Coding
7	NC_009377	AGGG	2	8	4212	4219	25 %	0 %	75 %	0 %	Non-Coding
8	NC_009377	GATA	2	8	4720	4727	50 %	25 %	25 %	0 %	Non-Coding
9	NC_009377	ATAA	2	8	7790	7797	75 %	25 %	0 %	0 %	Non-Coding
10	NC_009377	TTCT	2	8	8707	8714	0 %	75 %	0 %	25 %	Non-Coding
11	NC_009377	TGCC	2	8	8747	8754	0 %	25 %	25 %	50 %	Non-Coding
12	NC_009377	AAAG	2	8	8892	8899	75 %	0 %	25 %	0 %	Non-Coding
13	NC_009377	TCCC	2	8	9221	9228	0 %	25 %	0 %	75 %	Non-Coding
14	NC_009377	TAAA	2	8	11776	11783	75 %	25 %	0 %	0 %	Non-Coding
15	NC_009377	ATCC	2	8	15464	15471	25 %	25 %	0 %	50 %	Non-Coding
16	NC_009377	TATT	2	8	15482	15489	25 %	75 %	0 %	0 %	Non-Coding
17	NC_009377	TTAT	2	8	16191	16198	25 %	75 %	0 %	0 %	Non-Coding
18	NC_009377	ATTT	2	8	16224	16231	25 %	75 %	0 %	0 %	Non-Coding
19	NC_009377	AAAT	2	8	23548	23555	75 %	25 %	0 %	0 %	Non-Coding
20	NC_009377	TGCG	2	8	24792	24799	0 %	25 %	50 %	25 %	Non-Coding
21	NC_009377	AGGT	2	8	25039	25046	25 %	25 %	50 %	0 %	Non-Coding
22	NC_009377	TCCC	2	8	25248	25255	0 %	25 %	0 %	75 %	Non-Coding
23	NC_009377	CTTT	2	8	25431	25438	0 %	75 %	0 %	25 %	Non-Coding
24	NC_009377	CAAA	2	8	25475	25482	75 %	0 %	0 %	25 %	Non-Coding
25	NC_009377	TAAA	2	8	37594	37601	75 %	25 %	0 %	0 %	Non-Coding
26	NC_009377	GTTA	2	8	41540	41547	25 %	50 %	25 %	0 %	Non-Coding
27	NC_009377	AATG	2	8	43634	43641	50 %	25 %	25 %	0 %	Non-Coding
28	NC_009377	TTAT	2	8	44403	44410	25 %	75 %	0 %	0 %	Non-Coding
29	NC_009377	ATAA	2	8	44458	44465	75 %	25 %	0 %	0 %	Non-Coding
30	NC_009377	ATGT	2	8	44513	44520	25 %	50 %	25 %	0 %	Non-Coding
31	NC_009377	TTTG	2	8	44522	44529	0 %	75 %	25 %	0 %	Non-Coding
32	NC_009377	ATAA	2	8	46730	46737	75 %	25 %	0 %	0 %	Non-Coding
33	NC_009377	TTTA	2	8	46897	46904	25 %	75 %	0 %	0 %	Non-Coding
34	NC_009377	TTTA	2	8	47275	47282	25 %	75 %	0 %	0 %	Non-Coding
35	NC_009377	ATAA	2	8	48020	48027	75 %	25 %	0 %	0 %	Non-Coding
36	NC_009377	ATAA	2	8	49865	49872	75 %	25 %	0 %	0 %	Non-Coding
37	NC_009377	TGTT	2	8	50167	50174	0 %	75 %	25 %	0 %	Non-Coding
38	NC_009377	AGGG	2	8	52767	52774	25 %	0 %	75 %	0 %	Non-Coding
39	NC_009377	ACTG	2	8	53458	53465	25 %	25 %	25 %	25 %	Non-Coding
40	NC_009377	AAAG	2	8	53571	53578	75 %	0 %	25 %	0 %	Non-Coding
41	NC_009377	TTTA	2	8	55987	55994	25 %	75 %	0 %	0 %	Non-Coding
42	NC_009377	GGCT	2	8	57054	57061	0 %	25 %	50 %	25 %	Non-Coding
43	NC_009377	TATT	2	8	58455	58462	25 %	75 %	0 %	0 %	Non-Coding
44	NC_009377	TCCC	2	8	62338	62345	0 %	25 %	0 %	75 %	Non-Coding
45	NC_009377	TTGT	2	8	63555	63562	0 %	75 %	25 %	0 %	Non-Coding
46	NC_009377	TTTA	2	8	64020	64027	25 %	75 %	0 %	0 %	Non-Coding
47	NC_009377	CAGG	2	8	65215	65222	25 %	0 %	50 %	25 %	Non-Coding
48	NC_009377	TAAT	2	8	68454	68461	50 %	50 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.