MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Repeats of Shigella sonnei Ss046 plasmid pSS046_spC

Total Repeats: 17

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009347	ATG	2	6	154	159	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
2	NC_009347	GAC	2	6	231	236	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3	NC_009347	ACC	2	6	237	242	33.33 %	0 %	0 %	66.67 %	Non-Coding
4	NC_009347	TGA	2	6	652	657	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5	NC_009347	AGA	2	6	708	713	66.67 %	0 %	33.33 %	0 %	145294041
6	NC_009347	CTG	3	9	800	808	0 %	33.33 %	33.33 %	33.33 %	145294041
7	NC_009347	CCT	2	6	836	841	0 %	33.33 %	0 %	66.67 %	145294041
8	NC_009347	CAT	2	6	873	878	33.33 %	33.33 %	0 %	33.33 %	145294041
9	NC_009347	GAA	2	6	956	961	66.67 %	0 %	33.33 %	0 %	145294041
10	NC_009347	GTT	2	6	1032	1037	0 %	66.67 %	33.33 %	0 %	145294041
11	NC_009347	CTG	2	6	1216	1221	0 %	33.33 %	33.33 %	33.33 %	145294041
12	NC_009347	CTT	2	6	1232	1237	0 %	66.67 %	0 %	33.33 %	145294041
13	NC_009347	GAA	2	6	1248	1253	66.67 %	0 %	33.33 %	0 %	145294041
14	NC_009347	TCC	2	6	1520	1525	0 %	33.33 %	0 %	66.67 %	145294041
15	NC_009347	CGA	2	6	1563	1568	33.33 %	0 %	33.33 %	33.33 %	145294041
16	NC_009347	TGA	2	6	1584	1589	33.33 %	33.33 %	33.33 %	0 %	145294041
17	NC_009347	AAG	2	6	1728	1733	66.67 %	0 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.