MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Chlorobium phaeovibrioides DSM 265 chromosome

Total Repeats: 64

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009337	GAGAAA	2	12	1537	1548	66.67 %	0 %	33.33 %	0 %	Non-Coding
2	NC_009337	GGAGCG	2	12	123864	123875	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
3	NC_009337	GTGCTG	2	12	124722	124733	0 %	33.33 %	50 %	16.67 %	Non-Coding
4	NC_009337	TTTTGC	2	12	137073	137084	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
5	NC_009337	CCGCCA	2	12	138506	138517	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
6	NC_009337	TTTCCG	2	12	143952	143963	0 %	50 %	16.67 %	33.33 %	Non-Coding
7	NC_009337	TTTTCC	2	12	146063	146074	0 %	66.67 %	0 %	33.33 %	Non-Coding
8	NC_009337	GTACTT	2	12	149181	149192	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
9	NC_009337	CTTTTT	2	12	155911	155922	0 %	83.33 %	0 %	16.67 %	Non-Coding
10	NC_009337	AGCGTG	2	12	169904	169915	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
11	NC_009337	AAGCGA	2	12	194438	194449	50 %	0 %	33.33 %	16.67 %	Non-Coding
12	NC_009337	TTTGTT	2	12	197803	197814	0 %	83.33 %	16.67 %	0 %	Non-Coding
13	NC_009337	CACTTC	2	12	228790	228801	16.67 %	33.33 %	0 %	50 %	Non-Coding
14	NC_009337	CTTTTT	2	12	310936	310947	0 %	83.33 %	0 %	16.67 %	Non-Coding
15	NC_009337	TGTTTG	2	12	357087	357098	0 %	66.67 %	33.33 %	0 %	Non-Coding
16	NC_009337	CAACTT	2	12	398517	398528	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_009337	TTTTTA	2	12	425005	425016	16.67 %	83.33 %	0 %	0 %	Non-Coding
18	NC_009337	ATATTA	2	12	435748	435759	50 %	50 %	0 %	0 %	Non-Coding
19	NC_009337	GTTTCT	2	12	514496	514507	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
20	NC_009337	TTATCG	2	12	564990	565001	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
21	NC_009337	GAATCA	2	12	624950	624961	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
22	NC_009337	ACACTG	2	12	653551	653562	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
23	NC_009337	ACTCCC	2	12	713497	713508	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
24	NC_009337	GTACGG	2	12	730213	730224	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
25	NC_009337	GCTGAT	2	12	743718	743729	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
26	NC_009337	TGTTTT	2	12	761785	761796	0 %	83.33 %	16.67 %	0 %	Non-Coding
27	NC_009337	AACGAA	2	12	803411	803422	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
28	NC_009337	ACGATA	2	12	831173	831184	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
29	NC_009337	GGTTAG	2	12	873734	873745	16.67 %	33.33 %	50 %	0 %	Non-Coding
30	NC_009337	CTGTGA	2	12	913570	913581	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
31	NC_009337	ATCAAC	2	12	927142	927153	50 %	16.67 %	0 %	33.33 %	Non-Coding
32	NC_009337	CAGCCA	2	12	984338	984349	33.33 %	0 %	16.67 %	50 %	Non-Coding
33	NC_009337	TAATCA	2	12	1062149	1062160	50 %	33.33 %	0 %	16.67 %	Non-Coding
34	NC_009337	ATCACA	2	12	1173470	1173481	50 %	16.67 %	0 %	33.33 %	Non-Coding
35	NC_009337	TTATCG	2	12	1186722	1186733	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
36	NC_009337	TGGTTG	2	12	1221118	1221129	0 %	50 %	50 %	0 %	Non-Coding
37	NC_009337	TTGAAC	2	12	1222226	1222237	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
38	NC_009337	TTCTTT	2	12	1271450	1271461	0 %	83.33 %	0 %	16.67 %	Non-Coding
39	NC_009337	CCGCTC	2	12	1282540	1282551	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
40	NC_009337	GAAGCC	2	12	1285899	1285910	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
41	NC_009337	AAGGGA	2	12	1298467	1298478	50 %	0 %	50 %	0 %	Non-Coding
42	NC_009337	TTATCG	2	12	1365841	1365852	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
43	NC_009337	ACTGAA	2	12	1383099	1383110	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
44	NC_009337	CCAACC	2	12	1408368	1408379	33.33 %	0 %	0 %	66.67 %	Non-Coding
45	NC_009337	AAACAA	2	12	1417328	1417339	83.33 %	0 %	0 %	16.67 %	Non-Coding
46	NC_009337	TTACTG	2	12	1443707	1443718	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
47	NC_009337	TGCCAT	2	12	1453252	1453263	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
48	NC_009337	AGAAGG	2	12	1549558	1549569	50 %	0 %	50 %	0 %	Non-Coding
49	NC_009337	TTTTTC	2	12	1569689	1569700	0 %	83.33 %	0 %	16.67 %	Non-Coding
50	NC_009337	CACCAA	2	12	1586876	1586887	50 %	0 %	0 %	50 %	Non-Coding
51	NC_009337	GCTTTT	2	12	1670811	1670822	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
52	NC_009337	TACTCT	2	12	1670901	1670912	16.67 %	50 %	0 %	33.33 %	Non-Coding
53	NC_009337	TGAAAA	2	12	1672885	1672896	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
54	NC_009337	CTTTCA	2	12	1684739	1684750	16.67 %	50 %	0 %	33.33 %	Non-Coding
55	NC_009337	CCCTCA	2	12	1720931	1720942	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
56	NC_009337	AACCGT	2	12	1756349	1756360	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
57	NC_009337	TACAAA	2	12	1795693	1795704	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
58	NC_009337	GTCTCT	2	12	1845511	1845522	0 %	50 %	16.67 %	33.33 %	Non-Coding
59	NC_009337	AAACCC	2	12	1853934	1853945	50 %	0 %	0 %	50 %	Non-Coding
60	NC_009337	TTATAT	2	12	1875514	1875525	33.33 %	66.67 %	0 %	0 %	Non-Coding
61	NC_009337	ACTCCC	2	12	1910793	1910804	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
62	NC_009337	GGCACC	2	12	1927259	1927270	16.67 %	0 %	33.33 %	50 %	Non-Coding
63	NC_009337	CTTCGG	2	12	1929249	1929260	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
64	NC_009337	GGCCGG	2	12	1932998	1933009	0 %	0 %	66.67 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.