MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Geobacillus thermodenitrificans NG80-2 plasmid pLW1071

Total Repeats: 117

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009329	GCA	2	6	38	43	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2	NC_009329	ATA	2	6	120	125	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_009329	AAT	2	6	175	180	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_009329	AGA	3	9	371	379	66.67 %	0 %	33.33 %	0 %	Non-Coding
5	NC_009329	GCT	2	6	413	418	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6	NC_009329	TGT	2	6	469	474	0 %	66.67 %	33.33 %	0 %	Non-Coding
7	NC_009329	ATG	2	6	476	481	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8	NC_009329	ATA	2	6	519	524	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_009329	GAT	2	6	571	576	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
10	NC_009329	CAT	2	6	579	584	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
11	NC_009329	CTT	2	6	595	600	0 %	66.67 %	0 %	33.33 %	Non-Coding
12	NC_009329	CTT	2	6	624	629	0 %	66.67 %	0 %	33.33 %	Non-Coding
13	NC_009329	ATA	2	6	758	763	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_009329	CCA	2	6	823	828	33.33 %	0 %	0 %	66.67 %	Non-Coding
15	NC_009329	TTC	2	6	1976	1981	0 %	66.67 %	0 %	33.33 %	Non-Coding
16	NC_009329	TGA	2	6	3635	3640	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
17	NC_009329	TCC	2	6	4065	4070	0 %	33.33 %	0 %	66.67 %	Non-Coding
18	NC_009329	CTT	3	9	4074	4082	0 %	66.67 %	0 %	33.33 %	Non-Coding
19	NC_009329	TGT	2	6	4184	4189	0 %	66.67 %	33.33 %	0 %	Non-Coding
20	NC_009329	ACA	2	6	4195	4200	66.67 %	0 %	0 %	33.33 %	Non-Coding
21	NC_009329	TAT	2	6	4209	4214	33.33 %	66.67 %	0 %	0 %	Non-Coding
22	NC_009329	GTA	2	6	4216	4221	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
23	NC_009329	ACA	2	6	4226	4231	66.67 %	0 %	0 %	33.33 %	Non-Coding
24	NC_009329	CGA	2	6	5483	5488	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
25	NC_009329	CTT	2	6	6197	6202	0 %	66.67 %	0 %	33.33 %	Non-Coding
26	NC_009329	CAG	2	6	9492	9497	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
27	NC_009329	TCT	2	6	9565	9570	0 %	66.67 %	0 %	33.33 %	Non-Coding
28	NC_009329	AGT	2	6	14274	14279	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
29	NC_009329	AAC	2	6	14330	14335	66.67 %	0 %	0 %	33.33 %	Non-Coding
30	NC_009329	TCT	2	6	14360	14365	0 %	66.67 %	0 %	33.33 %	Non-Coding
31	NC_009329	CCA	2	6	14366	14371	33.33 %	0 %	0 %	66.67 %	Non-Coding
32	NC_009329	GCC	2	6	14375	14380	0 %	0 %	33.33 %	66.67 %	Non-Coding
33	NC_009329	AAT	2	6	14482	14487	66.67 %	33.33 %	0 %	0 %	Non-Coding
34	NC_009329	ATT	2	6	14509	14514	33.33 %	66.67 %	0 %	0 %	Non-Coding
35	NC_009329	GAA	2	6	15411	15416	66.67 %	0 %	33.33 %	0 %	Non-Coding
36	NC_009329	CGC	2	6	15486	15491	0 %	0 %	33.33 %	66.67 %	Non-Coding
37	NC_009329	GAA	2	6	15837	15842	66.67 %	0 %	33.33 %	0 %	Non-Coding
38	NC_009329	TAA	2	6	15973	15978	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_009329	TAG	2	6	16576	16581	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
40	NC_009329	ACA	2	6	16592	16597	66.67 %	0 %	0 %	33.33 %	Non-Coding
41	NC_009329	AGA	2	6	16617	16622	66.67 %	0 %	33.33 %	0 %	Non-Coding
42	NC_009329	TCC	2	6	16796	16801	0 %	33.33 %	0 %	66.67 %	Non-Coding
43	NC_009329	CGG	2	6	16834	16839	0 %	0 %	66.67 %	33.33 %	Non-Coding
44	NC_009329	GTC	2	6	18473	18478	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
45	NC_009329	TCG	2	6	18526	18531	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
46	NC_009329	CCT	2	6	18698	18703	0 %	33.33 %	0 %	66.67 %	Non-Coding
47	NC_009329	TCG	2	6	18826	18831	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
48	NC_009329	CGC	2	6	18935	18940	0 %	0 %	33.33 %	66.67 %	Non-Coding
49	NC_009329	ACG	2	6	18986	18991	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
50	NC_009329	TGC	2	6	19231	19236	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51	NC_009329	TGC	2	6	19267	19272	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
52	NC_009329	TAG	2	6	19315	19320	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
53	NC_009329	GTA	2	6	21307	21312	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
54	NC_009329	TAA	2	6	23402	23407	66.67 %	33.33 %	0 %	0 %	Non-Coding
55	NC_009329	TAT	2	6	23552	23557	33.33 %	66.67 %	0 %	0 %	Non-Coding
56	NC_009329	ATT	2	6	23589	23594	33.33 %	66.67 %	0 %	0 %	Non-Coding
57	NC_009329	AGC	2	6	23852	23857	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
58	NC_009329	TAT	2	6	23981	23986	33.33 %	66.67 %	0 %	0 %	Non-Coding
59	NC_009329	TTC	2	6	23994	23999	0 %	66.67 %	0 %	33.33 %	Non-Coding
60	NC_009329	GTT	2	6	24023	24028	0 %	66.67 %	33.33 %	0 %	Non-Coding
61	NC_009329	ATG	2	6	24117	24122	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
62	NC_009329	ATA	2	6	24127	24132	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_009329	TAA	2	6	24283	24288	66.67 %	33.33 %	0 %	0 %	Non-Coding
64	NC_009329	GAT	2	6	26212	26217	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
65	NC_009329	GCT	2	6	28173	28178	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
66	NC_009329	TCT	2	6	28259	28264	0 %	66.67 %	0 %	33.33 %	Non-Coding
67	NC_009329	AGG	2	6	28459	28464	33.33 %	0 %	66.67 %	0 %	Non-Coding
68	NC_009329	GAA	2	6	34713	34718	66.67 %	0 %	33.33 %	0 %	Non-Coding
69	NC_009329	GCC	2	6	34785	34790	0 %	0 %	33.33 %	66.67 %	Non-Coding
70	NC_009329	TAG	2	6	34847	34852	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
71	NC_009329	CCT	2	6	37233	37238	0 %	33.33 %	0 %	66.67 %	Non-Coding
72	NC_009329	CTT	2	6	37250	37255	0 %	66.67 %	0 %	33.33 %	Non-Coding
73	NC_009329	AAT	2	6	37375	37380	66.67 %	33.33 %	0 %	0 %	Non-Coding
74	NC_009329	ATT	2	6	37398	37403	33.33 %	66.67 %	0 %	0 %	Non-Coding
75	NC_009329	ATA	2	6	37420	37425	66.67 %	33.33 %	0 %	0 %	Non-Coding
76	NC_009329	TAT	2	6	37473	37478	33.33 %	66.67 %	0 %	0 %	Non-Coding
77	NC_009329	AGA	2	6	37617	37622	66.67 %	0 %	33.33 %	0 %	Non-Coding
78	NC_009329	GAA	2	6	37634	37639	66.67 %	0 %	33.33 %	0 %	Non-Coding
79	NC_009329	ATA	2	6	37780	37785	66.67 %	33.33 %	0 %	0 %	Non-Coding
80	NC_009329	ATT	3	9	37953	37961	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_009329	ACC	2	6	37967	37972	33.33 %	0 %	0 %	66.67 %	Non-Coding
82	NC_009329	AGA	2	6	38231	38236	66.67 %	0 %	33.33 %	0 %	Non-Coding
83	NC_009329	AGG	2	6	38269	38274	33.33 %	0 %	66.67 %	0 %	Non-Coding
84	NC_009329	AAT	2	6	38646	38651	66.67 %	33.33 %	0 %	0 %	Non-Coding
85	NC_009329	TAA	2	6	38676	38681	66.67 %	33.33 %	0 %	0 %	Non-Coding
86	NC_009329	TCA	2	6	39609	39614	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
87	NC_009329	AGG	2	6	42479	42484	33.33 %	0 %	66.67 %	0 %	Non-Coding
88	NC_009329	TTC	2	6	42584	42589	0 %	66.67 %	0 %	33.33 %	Non-Coding
89	NC_009329	CAT	2	6	42604	42609	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
90	NC_009329	AAT	2	6	42631	42636	66.67 %	33.33 %	0 %	0 %	Non-Coding
91	NC_009329	CTT	2	6	42657	42662	0 %	66.67 %	0 %	33.33 %	Non-Coding
92	NC_009329	CTG	2	6	42684	42689	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
93	NC_009329	ATA	2	6	42737	42742	66.67 %	33.33 %	0 %	0 %	Non-Coding
94	NC_009329	TTA	2	6	42758	42763	33.33 %	66.67 %	0 %	0 %	Non-Coding
95	NC_009329	TCT	2	6	45316	45321	0 %	66.67 %	0 %	33.33 %	Non-Coding
96	NC_009329	TTG	2	6	46828	46833	0 %	66.67 %	33.33 %	0 %	Non-Coding
97	NC_009329	TGT	2	6	46937	46942	0 %	66.67 %	33.33 %	0 %	Non-Coding
98	NC_009329	ATT	2	6	46954	46959	33.33 %	66.67 %	0 %	0 %	Non-Coding
99	NC_009329	TCG	2	6	46982	46987	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
100	NC_009329	CGA	2	6	48087	48092	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
101	NC_009329	TCA	2	6	48110	48115	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
102	NC_009329	AAG	2	6	51615	51620	66.67 %	0 %	33.33 %	0 %	Non-Coding
103	NC_009329	CTT	2	6	51639	51644	0 %	66.67 %	0 %	33.33 %	Non-Coding
104	NC_009329	ATG	2	6	51649	51654	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
105	NC_009329	GTT	2	6	51967	51972	0 %	66.67 %	33.33 %	0 %	Non-Coding
106	NC_009329	CCT	2	6	54304	54309	0 %	33.33 %	0 %	66.67 %	Non-Coding
107	NC_009329	TCC	2	6	55683	55688	0 %	33.33 %	0 %	66.67 %	Non-Coding
108	NC_009329	AGG	2	6	55708	55713	33.33 %	0 %	66.67 %	0 %	Non-Coding
109	NC_009329	CTC	2	6	55729	55734	0 %	33.33 %	0 %	66.67 %	Non-Coding
110	NC_009329	ATT	2	6	55816	55821	33.33 %	66.67 %	0 %	0 %	Non-Coding
111	NC_009329	AAT	2	6	55901	55906	66.67 %	33.33 %	0 %	0 %	Non-Coding
112	NC_009329	CAC	2	6	55971	55976	33.33 %	0 %	0 %	66.67 %	Non-Coding
113	NC_009329	TGA	2	6	56046	56051	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
114	NC_009329	TGA	2	6	56154	56159	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
115	NC_009329	TAA	2	6	56163	56168	66.67 %	33.33 %	0 %	0 %	Non-Coding
116	NC_009329	AGG	2	6	56253	56258	33.33 %	0 %	66.67 %	0 %	Non-Coding
117	NC_009329	TAC	2	6	57648	57653	33.33 %	33.33 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.