MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Geobacillus thermodenitrificans NG80-2 chromosome

Total Repeats: 178

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009328	TTTTTA	2	12	1671	1682	16.67 %	83.33 %	0 %	0 %	Non-Coding
2	NC_009328	ATAAAA	2	12	29034	29045	83.33 %	16.67 %	0 %	0 %	Non-Coding
3	NC_009328	AGAGGG	2	12	45107	45118	33.33 %	0 %	66.67 %	0 %	Non-Coding
4	NC_009328	ATGTTT	2	12	60669	60680	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
5	NC_009328	AAAACA	2	12	86178	86189	83.33 %	0 %	0 %	16.67 %	Non-Coding
6	NC_009328	AGTCAA	2	12	92668	92679	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
7	NC_009328	GGAAAT	2	12	146254	146265	50 %	16.67 %	33.33 %	0 %	Non-Coding
8	NC_009328	GGAAAA	2	12	170773	170784	66.67 %	0 %	33.33 %	0 %	Non-Coding
9	NC_009328	TGGGGC	2	12	171309	171320	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
10	NC_009328	GGCCAC	2	12	182633	182644	16.67 %	0 %	33.33 %	50 %	Non-Coding
11	NC_009328	ATCAAT	2	12	188915	188926	50 %	33.33 %	0 %	16.67 %	Non-Coding
12	NC_009328	TAATTT	2	12	208934	208945	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_009328	CGAAGT	2	12	221440	221451	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
14	NC_009328	GGAAAC	2	12	264213	264224	50 %	0 %	33.33 %	16.67 %	Non-Coding
15	NC_009328	TCTTTT	2	12	334778	334789	0 %	83.33 %	0 %	16.67 %	Non-Coding
16	NC_009328	GCATCG	2	12	335071	335082	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
17	NC_009328	GTGCAA	2	12	340592	340603	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
18	NC_009328	AGTGAG	2	12	348371	348382	33.33 %	16.67 %	50 %	0 %	Non-Coding
19	NC_009328	GGATAA	2	12	353262	353273	50 %	16.67 %	33.33 %	0 %	Non-Coding
20	NC_009328	TGAAAA	2	12	366916	366927	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
21	NC_009328	TAACGT	2	12	403440	403451	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
22	NC_009328	ATGAAA	2	12	424977	424988	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
23	NC_009328	AAATAA	2	12	486212	486223	83.33 %	16.67 %	0 %	0 %	Non-Coding
24	NC_009328	TAAAAA	2	12	506210	506221	83.33 %	16.67 %	0 %	0 %	Non-Coding
25	NC_009328	CGTTTT	2	12	512503	512514	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
26	NC_009328	AGCATC	2	12	553058	553069	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
27	NC_009328	AATATG	2	12	622555	622566	50 %	33.33 %	16.67 %	0 %	Non-Coding
28	NC_009328	GGAAAA	2	12	624393	624404	66.67 %	0 %	33.33 %	0 %	Non-Coding
29	NC_009328	CACACT	2	12	628220	628231	33.33 %	16.67 %	0 %	50 %	Non-Coding
30	NC_009328	AATGTG	2	12	629936	629947	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
31	NC_009328	CTTTTT	2	12	639722	639733	0 %	83.33 %	0 %	16.67 %	Non-Coding
32	NC_009328	TAGTTT	2	12	678061	678072	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
33	NC_009328	AGGGAT	2	12	706329	706340	33.33 %	16.67 %	50 %	0 %	Non-Coding
34	NC_009328	CGCTTC	2	12	707866	707877	0 %	33.33 %	16.67 %	50 %	Non-Coding
35	NC_009328	AAAAGG	2	12	709086	709097	66.67 %	0 %	33.33 %	0 %	Non-Coding
36	NC_009328	GATGAG	2	12	712877	712888	33.33 %	16.67 %	50 %	0 %	Non-Coding
37	NC_009328	GGCGGG	2	12	770526	770537	0 %	0 %	83.33 %	16.67 %	Non-Coding
38	NC_009328	GCTGCG	2	12	805112	805123	0 %	16.67 %	50 %	33.33 %	Non-Coding
39	NC_009328	TATGGC	2	12	810714	810725	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
40	NC_009328	GAAAAA	2	12	827380	827391	83.33 %	0 %	16.67 %	0 %	Non-Coding
41	NC_009328	AATATA	2	12	829545	829556	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_009328	AATAGA	2	12	843095	843106	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
43	NC_009328	TTTGAT	2	12	848367	848378	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
44	NC_009328	GAATAT	2	12	856906	856917	50 %	33.33 %	16.67 %	0 %	Non-Coding
45	NC_009328	ATAGAT	2	12	883992	884003	50 %	33.33 %	16.67 %	0 %	Non-Coding
46	NC_009328	TTTGAC	2	12	933966	933977	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
47	NC_009328	AGAAGG	2	12	934209	934220	50 %	0 %	50 %	0 %	Non-Coding
48	NC_009328	AAAAAG	2	12	936504	936515	83.33 %	0 %	16.67 %	0 %	Non-Coding
49	NC_009328	ATAATG	2	12	959169	959180	50 %	33.33 %	16.67 %	0 %	Non-Coding
50	NC_009328	TTGTTT	2	12	1025168	1025179	0 %	83.33 %	16.67 %	0 %	Non-Coding
51	NC_009328	TAGACA	2	12	1055386	1055397	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
52	NC_009328	TTCGAT	2	12	1082806	1082817	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
53	NC_009328	ACGAAA	2	12	1118519	1118530	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
54	NC_009328	TTTCTG	2	12	1136560	1136571	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
55	NC_009328	TGCTTG	2	12	1156040	1156051	0 %	50 %	33.33 %	16.67 %	Non-Coding
56	NC_009328	AGAGAA	2	12	1172797	1172808	66.67 %	0 %	33.33 %	0 %	Non-Coding
57	NC_009328	CTTTTT	2	12	1224470	1224481	0 %	83.33 %	0 %	16.67 %	Non-Coding
58	NC_009328	CTTATT	2	12	1233097	1233108	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
59	NC_009328	TGGCGG	2	12	1235319	1235330	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
60	NC_009328	TCAAGA	2	12	1274099	1274110	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
61	NC_009328	TGTAAA	2	12	1310693	1310704	50 %	33.33 %	16.67 %	0 %	Non-Coding
62	NC_009328	CCTTTT	2	12	1325495	1325506	0 %	66.67 %	0 %	33.33 %	Non-Coding
63	NC_009328	ATTCGT	2	12	1330611	1330622	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
64	NC_009328	AAATTC	2	12	1391166	1391177	50 %	33.33 %	0 %	16.67 %	Non-Coding
65	NC_009328	ACGTCA	2	12	1422018	1422029	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
66	NC_009328	ATGGAA	2	12	1434789	1434800	50 %	16.67 %	33.33 %	0 %	Non-Coding
67	NC_009328	AGTGCG	2	12	1455942	1455953	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
68	NC_009328	CGATGG	2	12	1460103	1460114	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
69	NC_009328	AATGCC	2	12	1502151	1502162	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
70	NC_009328	GAAAAA	2	12	1502180	1502191	83.33 %	0 %	16.67 %	0 %	Non-Coding
71	NC_009328	CCGGAA	2	12	1505725	1505736	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
72	NC_009328	TTGTGT	2	12	1519738	1519749	0 %	66.67 %	33.33 %	0 %	Non-Coding
73	NC_009328	TACGGC	2	12	1521219	1521230	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
74	NC_009328	GGGAGA	2	12	1530645	1530656	33.33 %	0 %	66.67 %	0 %	Non-Coding
75	NC_009328	GAGGAA	2	12	1536181	1536192	50 %	0 %	50 %	0 %	Non-Coding
76	NC_009328	TTGTTT	2	12	1567464	1567475	0 %	83.33 %	16.67 %	0 %	Non-Coding
77	NC_009328	GTTTTT	2	12	1582147	1582158	0 %	83.33 %	16.67 %	0 %	Non-Coding
78	NC_009328	CTCTTT	2	12	1583172	1583183	0 %	66.67 %	0 %	33.33 %	Non-Coding
79	NC_009328	CGAGGT	2	12	1597768	1597779	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
80	NC_009328	AATGAG	2	12	1607131	1607142	50 %	16.67 %	33.33 %	0 %	Non-Coding
81	NC_009328	TGTGAC	2	12	1608318	1608329	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
82	NC_009328	GTAATG	2	12	1613054	1613065	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
83	NC_009328	TTAAAT	2	12	1645538	1645549	50 %	50 %	0 %	0 %	Non-Coding
84	NC_009328	ATCATT	2	12	1645572	1645583	33.33 %	50 %	0 %	16.67 %	Non-Coding
85	NC_009328	CACTTT	2	12	1654507	1654518	16.67 %	50 %	0 %	33.33 %	Non-Coding
86	NC_009328	GAAAAT	2	12	1667659	1667670	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
87	NC_009328	GTTTAC	2	12	1669538	1669549	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
88	NC_009328	ATTGAA	2	12	1676388	1676399	50 %	33.33 %	16.67 %	0 %	Non-Coding
89	NC_009328	GATATG	2	12	1692286	1692297	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
90	NC_009328	AAACAA	2	12	1700906	1700917	83.33 %	0 %	0 %	16.67 %	Non-Coding
91	NC_009328	CGCAAA	2	12	1706422	1706433	50 %	0 %	16.67 %	33.33 %	Non-Coding
92	NC_009328	TCTCCC	2	12	1727769	1727780	0 %	33.33 %	0 %	66.67 %	Non-Coding
93	NC_009328	TCTGTT	2	12	1739556	1739567	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
94	NC_009328	TGATTT	2	12	1744914	1744925	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
95	NC_009328	TTCCTG	2	12	1745025	1745036	0 %	50 %	16.67 %	33.33 %	Non-Coding
96	NC_009328	GCCATG	2	12	1745459	1745470	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
97	NC_009328	ACGCAA	2	12	1745668	1745679	50 %	0 %	16.67 %	33.33 %	Non-Coding
98	NC_009328	TGATAA	2	12	1750355	1750366	50 %	33.33 %	16.67 %	0 %	Non-Coding
99	NC_009328	AAAGGA	2	12	1765843	1765854	66.67 %	0 %	33.33 %	0 %	Non-Coding
100	NC_009328	TTTCCT	2	12	1837732	1837743	0 %	66.67 %	0 %	33.33 %	Non-Coding
101	NC_009328	ATAGAA	2	12	1883283	1883294	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
102	NC_009328	ACTCCC	2	12	1903979	1903990	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
103	NC_009328	ATCCCT	2	12	1947192	1947203	16.67 %	33.33 %	0 %	50 %	Non-Coding
104	NC_009328	ATTGTT	2	12	1969540	1969551	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
105	NC_009328	AACGCA	2	12	1998333	1998344	50 %	0 %	16.67 %	33.33 %	Non-Coding
106	NC_009328	CGGCTG	2	12	2008466	2008477	0 %	16.67 %	50 %	33.33 %	Non-Coding
107	NC_009328	CCCCAT	2	12	2081661	2081672	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
108	NC_009328	ACTCAA	2	12	2089502	2089513	50 %	16.67 %	0 %	33.33 %	Non-Coding
109	NC_009328	TCAATA	2	12	2091026	2091037	50 %	33.33 %	0 %	16.67 %	Non-Coding
110	NC_009328	TAATTT	2	12	2091072	2091083	33.33 %	66.67 %	0 %	0 %	Non-Coding
111	NC_009328	GGTATC	2	12	2092920	2092931	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
112	NC_009328	CATTTT	2	12	2109178	2109189	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
113	NC_009328	TTTCAT	2	12	2145937	2145948	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
114	NC_009328	TTCCAT	2	12	2148491	2148502	16.67 %	50 %	0 %	33.33 %	Non-Coding
115	NC_009328	TGGCTT	2	12	2167488	2167499	0 %	50 %	33.33 %	16.67 %	Non-Coding
116	NC_009328	TAACAT	2	12	2183911	2183922	50 %	33.33 %	0 %	16.67 %	Non-Coding
117	NC_009328	ATAAAA	2	12	2205676	2205687	83.33 %	16.67 %	0 %	0 %	Non-Coding
118	NC_009328	CCTTTT	2	12	2210478	2210489	0 %	66.67 %	0 %	33.33 %	Non-Coding
119	NC_009328	CCCTCC	2	12	2254461	2254472	0 %	16.67 %	0 %	83.33 %	Non-Coding
120	NC_009328	AATCAT	2	12	2288395	2288406	50 %	33.33 %	0 %	16.67 %	Non-Coding
121	NC_009328	TTTTTC	2	12	2308946	2308957	0 %	83.33 %	0 %	16.67 %	Non-Coding
122	NC_009328	TTTTAT	2	12	2337051	2337062	16.67 %	83.33 %	0 %	0 %	Non-Coding
123	NC_009328	CGATGG	2	12	2426441	2426452	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
124	NC_009328	GCCGAC	2	12	2438081	2438092	16.67 %	0 %	33.33 %	50 %	Non-Coding
125	NC_009328	CCCCTT	2	12	2448921	2448932	0 %	33.33 %	0 %	66.67 %	Non-Coding
126	NC_009328	ATAACA	2	12	2461622	2461633	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
127	NC_009328	TTTAAC	2	12	2471305	2471316	33.33 %	50 %	0 %	16.67 %	Non-Coding
128	NC_009328	CAAAGG	2	12	2525843	2525854	50 %	0 %	33.33 %	16.67 %	Non-Coding
129	NC_009328	TGACTT	2	12	2547282	2547293	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
130	NC_009328	ACAAAA	2	12	2554179	2554190	83.33 %	0 %	0 %	16.67 %	Non-Coding
131	NC_009328	TTTATT	2	12	2576240	2576251	16.67 %	83.33 %	0 %	0 %	Non-Coding
132	NC_009328	AAATAA	2	12	2657080	2657091	83.33 %	16.67 %	0 %	0 %	Non-Coding
133	NC_009328	TGCATC	2	12	2662529	2662540	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
134	NC_009328	TATAAA	2	12	2719911	2719922	66.67 %	33.33 %	0 %	0 %	Non-Coding
135	NC_009328	GAAAAA	2	12	2736820	2736831	83.33 %	0 %	16.67 %	0 %	Non-Coding
136	NC_009328	ATTTTT	2	12	2810719	2810730	16.67 %	83.33 %	0 %	0 %	Non-Coding
137	NC_009328	ACAAAA	2	12	2818312	2818323	83.33 %	0 %	0 %	16.67 %	Non-Coding
138	NC_009328	TTCTCT	2	12	2871199	2871210	0 %	66.67 %	0 %	33.33 %	Non-Coding
139	NC_009328	AATGAT	2	12	2882352	2882363	50 %	33.33 %	16.67 %	0 %	Non-Coding
140	NC_009328	TTTTGC	2	12	2892399	2892410	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
141	NC_009328	CTTTTT	2	12	2903249	2903260	0 %	83.33 %	0 %	16.67 %	Non-Coding
142	NC_009328	TTCAAT	2	12	2917394	2917405	33.33 %	50 %	0 %	16.67 %	Non-Coding
143	NC_009328	TAGCCA	2	12	2946057	2946068	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
144	NC_009328	TTAGTT	2	12	2952443	2952454	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
145	NC_009328	TGGCTT	2	12	2952729	2952740	0 %	50 %	33.33 %	16.67 %	Non-Coding
146	NC_009328	CATGTT	2	12	2963045	2963056	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
147	NC_009328	TGAAAA	2	12	2966141	2966152	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
148	NC_009328	ATTTTG	2	12	2995907	2995918	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
149	NC_009328	GTCAAT	2	12	3009582	3009593	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
150	NC_009328	TGAAAA	2	12	3033814	3033825	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
151	NC_009328	TCATTC	2	12	3039307	3039318	16.67 %	50 %	0 %	33.33 %	Non-Coding
152	NC_009328	TCAAAA	2	12	3092795	3092806	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
153	NC_009328	AAAGGA	2	12	3104536	3104547	66.67 %	0 %	33.33 %	0 %	Non-Coding
154	NC_009328	CTTCAT	2	12	3106789	3106800	16.67 %	50 %	0 %	33.33 %	Non-Coding
155	NC_009328	TCATGC	2	12	3108628	3108639	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
156	NC_009328	TTTCGT	2	12	3142814	3142825	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
157	NC_009328	TAAACA	2	12	3171912	3171923	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
158	NC_009328	TTTTAT	2	12	3189362	3189373	16.67 %	83.33 %	0 %	0 %	Non-Coding
159	NC_009328	TTACAT	2	12	3200511	3200522	33.33 %	50 %	0 %	16.67 %	Non-Coding
160	NC_009328	CATCGG	2	12	3204764	3204775	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
161	NC_009328	TTTCCA	2	12	3206726	3206737	16.67 %	50 %	0 %	33.33 %	Non-Coding
162	NC_009328	TAGTAA	2	12	3210025	3210036	50 %	33.33 %	16.67 %	0 %	Non-Coding
163	NC_009328	TCCCCA	2	12	3232878	3232889	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
164	NC_009328	TCAACT	2	12	3288137	3288148	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
165	NC_009328	GGTATA	2	12	3293045	3293056	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
166	NC_009328	TTAACA	2	12	3332848	3332859	50 %	33.33 %	0 %	16.67 %	Non-Coding
167	NC_009328	ATCACA	2	12	3363207	3363218	50 %	16.67 %	0 %	33.33 %	Non-Coding
168	NC_009328	TCTTTT	2	12	3364588	3364599	0 %	83.33 %	0 %	16.67 %	Non-Coding
169	NC_009328	TCCCCT	2	12	3434644	3434655	0 %	33.33 %	0 %	66.67 %	Non-Coding
170	NC_009328	GATTAT	2	12	3468680	3468691	33.33 %	50 %	16.67 %	0 %	Non-Coding
171	NC_009328	CCTTTT	2	12	3502863	3502874	0 %	66.67 %	0 %	33.33 %	Non-Coding
172	NC_009328	CGCCAA	2	12	3509015	3509026	33.33 %	0 %	16.67 %	50 %	Non-Coding
173	NC_009328	GAAGCT	2	12	3514846	3514857	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
174	NC_009328	ATGAAA	2	12	3523212	3523223	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
175	NC_009328	TCCAAA	2	12	3537497	3537508	50 %	16.67 %	0 %	33.33 %	Non-Coding
176	NC_009328	GAAAAA	2	12	3539377	3539388	83.33 %	0 %	16.67 %	0 %	Non-Coding
177	NC_009328	AATAAA	2	12	3540893	3540904	83.33 %	16.67 %	0 %	0 %	Non-Coding
178	NC_009328	CTTTCC	2	12	3543641	3543652	0 %	50 %	0 %	50 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.