MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Burkholderia vietnamiensis G4 chromosome 2

Total Repeats: 159

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009255	ACCGGC	2	12	8621	8632	16.67 %	0 %	33.33 %	50 %	Non-Coding
2	NC_009255	GACGGC	2	12	10534	10545	16.67 %	0 %	50 %	33.33 %	Non-Coding
3	NC_009255	CGCTCG	2	12	10763	10774	0 %	16.67 %	33.33 %	50 %	Non-Coding
4	NC_009255	CGCGAT	2	12	20393	20404	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
5	NC_009255	GCGCAC	2	12	23022	23033	16.67 %	0 %	33.33 %	50 %	Non-Coding
6	NC_009255	GCGCCG	2	12	34291	34302	0 %	0 %	50 %	50 %	Non-Coding
7	NC_009255	CATCGC	2	12	36483	36494	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
8	NC_009255	GCCGTC	2	12	37862	37873	0 %	16.67 %	33.33 %	50 %	Non-Coding
9	NC_009255	CGACCA	2	12	52628	52639	33.33 %	0 %	16.67 %	50 %	Non-Coding
10	NC_009255	GCGCCG	2	12	57712	57723	0 %	0 %	50 %	50 %	Non-Coding
11	NC_009255	AGCGGC	2	12	59511	59522	16.67 %	0 %	50 %	33.33 %	Non-Coding
12	NC_009255	GCGGTG	2	12	64929	64940	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
13	NC_009255	GCTTCG	2	12	143417	143428	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
14	NC_009255	CCCGCG	2	12	145070	145081	0 %	0 %	33.33 %	66.67 %	Non-Coding
15	NC_009255	CAGAGC	2	12	155735	155746	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
16	NC_009255	CCATCC	2	12	155795	155806	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
17	NC_009255	GCGATC	2	12	185803	185814	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
18	NC_009255	GCTCGA	2	12	185933	185944	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
19	NC_009255	CGCGAT	2	12	186087	186098	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
20	NC_009255	ACCTCG	2	12	191353	191364	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
21	NC_009255	TGCCGC	2	12	201960	201971	0 %	16.67 %	33.33 %	50 %	Non-Coding
22	NC_009255	TGCCGC	2	12	203572	203583	0 %	16.67 %	33.33 %	50 %	Non-Coding
23	NC_009255	GCCGCG	2	12	213102	213113	0 %	0 %	50 %	50 %	Non-Coding
24	NC_009255	GCCGTT	2	12	217916	217927	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
25	NC_009255	ACCGGC	2	12	218494	218505	16.67 %	0 %	33.33 %	50 %	Non-Coding
26	NC_009255	GACGCC	2	12	248621	248632	16.67 %	0 %	33.33 %	50 %	Non-Coding
27	NC_009255	GCGCAA	2	12	283740	283751	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
28	NC_009255	CTTCCC	2	12	286384	286395	0 %	33.33 %	0 %	66.67 %	Non-Coding
29	NC_009255	GGCCGC	2	12	295106	295117	0 %	0 %	50 %	50 %	Non-Coding
30	NC_009255	GTCCCG	2	12	324690	324701	0 %	16.67 %	33.33 %	50 %	Non-Coding
31	NC_009255	ATGCAC	2	12	333400	333411	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
32	NC_009255	CACCGC	2	12	365503	365514	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
33	NC_009255	TGCCGA	3	18	388817	388834	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
34	NC_009255	CCGGCC	2	12	459262	459273	0 %	0 %	33.33 %	66.67 %	Non-Coding
35	NC_009255	ACCGGC	2	12	465226	465237	16.67 %	0 %	33.33 %	50 %	Non-Coding
36	NC_009255	GCGTTG	7	42	479050	479091	0 %	33.33 %	50 %	16.67 %	Non-Coding
37	NC_009255	AGCCGC	2	12	483955	483966	16.67 %	0 %	33.33 %	50 %	Non-Coding
38	NC_009255	GGCACC	2	12	484155	484166	16.67 %	0 %	33.33 %	50 %	Non-Coding
39	NC_009255	GAGGCA	2	12	533122	533133	33.33 %	0 %	50 %	16.67 %	Non-Coding
40	NC_009255	ATATTT	2	12	544705	544716	33.33 %	66.67 %	0 %	0 %	Non-Coding
41	NC_009255	CGCGCA	2	12	559233	559244	16.67 %	0 %	33.33 %	50 %	Non-Coding
42	NC_009255	ACCGCC	2	12	578785	578796	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
43	NC_009255	CACCGC	6	36	578803	578838	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
44	NC_009255	GAAGCC	2	12	586443	586454	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
45	NC_009255	CCGAAG	3	18	586465	586482	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
46	NC_009255	GCCGAT	3	18	586494	586511	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
47	NC_009255	CCGCTG	2	12	606649	606660	0 %	16.67 %	33.33 %	50 %	Non-Coding
48	NC_009255	CCGCTA	2	12	606661	606672	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
49	NC_009255	CGCCTC	4	24	606674	606697	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
50	NC_009255	GCACCA	3	18	660859	660876	33.33 %	0 %	16.67 %	50 %	Non-Coding
51	NC_009255	GCGGAG	2	12	670735	670746	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
52	NC_009255	GTTCAA	2	12	692167	692178	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
53	NC_009255	GTGCGG	2	12	695479	695490	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
54	NC_009255	TTCGGC	2	12	696783	696794	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
55	NC_009255	CAGCGA	2	12	702026	702037	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
56	NC_009255	TTATCG	2	12	722904	722915	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
57	NC_009255	TGCGAT	2	12	758462	758473	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
58	NC_009255	GCGACA	17	102	758475	758576	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
59	NC_009255	GCGACT	5	30	758577	758606	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
60	NC_009255	GCAACT	2	12	758625	758636	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
61	NC_009255	TTCGCC	2	12	759783	759794	0 %	33.33 %	16.67 %	50 %	Non-Coding
62	NC_009255	CGGCGA	2	12	786162	786173	16.67 %	0 %	50 %	33.33 %	Non-Coding
63	NC_009255	GACCTC	2	12	800255	800266	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
64	NC_009255	CGATAT	2	12	843383	843394	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
65	NC_009255	CGACGC	2	12	890022	890033	16.67 %	0 %	33.33 %	50 %	Non-Coding
66	NC_009255	CGAAGT	2	12	913099	913110	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
67	NC_009255	GGGGTG	2	12	915874	915885	0 %	16.67 %	83.33 %	0 %	Non-Coding
68	NC_009255	CTGCGG	2	12	942236	942247	0 %	16.67 %	50 %	33.33 %	Non-Coding
69	NC_009255	CGATAC	2	12	944473	944484	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
70	NC_009255	TATGCA	2	12	952930	952941	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
71	NC_009255	GCGTGC	2	12	970327	970338	0 %	16.67 %	50 %	33.33 %	Non-Coding
72	NC_009255	CGCGTG	2	12	996413	996424	0 %	16.67 %	50 %	33.33 %	Non-Coding
73	NC_009255	GATGCG	2	12	1046251	1046262	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
74	NC_009255	CGTAAT	2	12	1047785	1047796	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
75	NC_009255	GGTCGG	2	12	1086546	1086557	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
76	NC_009255	ATGACG	2	12	1100002	1100013	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
77	NC_009255	TGATCG	2	12	1126840	1126851	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
78	NC_009255	ATGGGA	2	12	1152330	1152341	33.33 %	16.67 %	50 %	0 %	Non-Coding
79	NC_009255	TCAATC	2	12	1172729	1172740	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
80	NC_009255	CCGATG	2	12	1197904	1197915	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
81	NC_009255	GCGCGT	2	12	1215958	1215969	0 %	16.67 %	50 %	33.33 %	Non-Coding
82	NC_009255	GCAACG	2	12	1215985	1215996	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
83	NC_009255	ACCTGG	2	12	1283063	1283074	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
84	NC_009255	AACTCG	2	12	1283993	1284004	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
85	NC_009255	GCGCTT	2	12	1289366	1289377	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
86	NC_009255	CCGCGC	2	12	1296569	1296580	0 %	0 %	33.33 %	66.67 %	Non-Coding
87	NC_009255	ACCCCA	2	12	1329472	1329483	33.33 %	0 %	0 %	66.67 %	Non-Coding
88	NC_009255	TGTGCG	2	12	1351695	1351706	0 %	33.33 %	50 %	16.67 %	Non-Coding
89	NC_009255	TGCTGG	2	12	1360792	1360803	0 %	33.33 %	50 %	16.67 %	Non-Coding
90	NC_009255	CGCGAG	3	18	1389210	1389227	16.67 %	0 %	50 %	33.33 %	Non-Coding
91	NC_009255	TGCGTG	2	12	1396012	1396023	0 %	33.33 %	50 %	16.67 %	Non-Coding
92	NC_009255	GCTGCG	2	12	1409114	1409125	0 %	16.67 %	50 %	33.33 %	Non-Coding
93	NC_009255	AGAAAG	2	12	1422132	1422143	66.67 %	0 %	33.33 %	0 %	Non-Coding
94	NC_009255	ACGCCG	2	12	1434343	1434354	16.67 %	0 %	33.33 %	50 %	Non-Coding
95	NC_009255	GCCGAT	2	12	1434979	1434990	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
96	NC_009255	GGCGCA	2	12	1435933	1435944	16.67 %	0 %	50 %	33.33 %	Non-Coding
97	NC_009255	CGCATG	2	12	1441790	1441801	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
98	NC_009255	GGCGCC	2	12	1442201	1442212	0 %	0 %	50 %	50 %	Non-Coding
99	NC_009255	GCGATT	2	12	1460108	1460119	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
100	NC_009255	CGCTGA	3	18	1461477	1461494	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
101	NC_009255	CGGCGC	2	12	1464093	1464104	0 %	0 %	50 %	50 %	Non-Coding
102	NC_009255	CGGGGC	3	18	1540620	1540637	0 %	0 %	66.67 %	33.33 %	Non-Coding
103	NC_009255	GTGCCG	2	12	1548983	1548994	0 %	16.67 %	50 %	33.33 %	Non-Coding
104	NC_009255	GTTGAC	2	12	1559566	1559577	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
105	NC_009255	GCCGAA	20	120	1559599	1559718	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
106	NC_009255	CGAAAC	2	12	1564059	1564070	50 %	0 %	16.67 %	33.33 %	Non-Coding
107	NC_009255	GACCGC	2	12	1572382	1572393	16.67 %	0 %	33.33 %	50 %	Non-Coding
108	NC_009255	CGCGTG	2	12	1595254	1595265	0 %	16.67 %	50 %	33.33 %	Non-Coding
109	NC_009255	GCTGCG	2	12	1621074	1621085	0 %	16.67 %	50 %	33.33 %	Non-Coding
110	NC_009255	TGCGGC	2	12	1659768	1659779	0 %	16.67 %	50 %	33.33 %	Non-Coding
111	NC_009255	CGGCAT	2	12	1675300	1675311	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
112	NC_009255	GCCTGC	2	12	1684073	1684084	0 %	16.67 %	33.33 %	50 %	Non-Coding
113	NC_009255	TCCGGT	2	12	1689313	1689324	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
114	NC_009255	GCGATC	2	12	1722432	1722443	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
115	NC_009255	ATCGCG	2	12	1730967	1730978	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
116	NC_009255	GGCGGA	2	12	1757150	1757161	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
117	NC_009255	TCGCGC	2	12	1768061	1768072	0 %	16.67 %	33.33 %	50 %	Non-Coding
118	NC_009255	CGTTTC	2	12	1841641	1841652	0 %	50 %	16.67 %	33.33 %	Non-Coding
119	NC_009255	GCGCGT	2	12	1861525	1861536	0 %	16.67 %	50 %	33.33 %	Non-Coding
120	NC_009255	TGCATC	2	12	1864041	1864052	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
121	NC_009255	CCGAGC	2	12	1907468	1907479	16.67 %	0 %	33.33 %	50 %	Non-Coding
122	NC_009255	CGGGCC	2	12	1916145	1916156	0 %	0 %	50 %	50 %	Non-Coding
123	NC_009255	TGTCGT	2	12	1966964	1966975	0 %	50 %	33.33 %	16.67 %	Non-Coding
124	NC_009255	TCATCG	2	12	1968993	1969004	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
125	NC_009255	CCCGCA	2	12	1972555	1972566	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
126	NC_009255	CAAAAC	2	12	1997114	1997125	66.67 %	0 %	0 %	33.33 %	Non-Coding
127	NC_009255	ACCGTC	2	12	2014463	2014474	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
128	NC_009255	TCGGAA	2	12	2035510	2035521	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
129	NC_009255	AGATGA	2	12	2054927	2054938	50 %	16.67 %	33.33 %	0 %	Non-Coding
130	NC_009255	AGATGA	2	12	2055946	2055957	50 %	16.67 %	33.33 %	0 %	Non-Coding
131	NC_009255	TCATAT	2	12	2110690	2110701	33.33 %	50 %	0 %	16.67 %	Non-Coding
132	NC_009255	ATGTGG	2	12	2117233	2117244	16.67 %	33.33 %	50 %	0 %	Non-Coding
133	NC_009255	ACCGAC	2	12	2134988	2134999	33.33 %	0 %	16.67 %	50 %	Non-Coding
134	NC_009255	CGATGC	2	12	2141723	2141734	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
135	NC_009255	CATGCG	2	12	2143941	2143952	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
136	NC_009255	GCCGGC	2	12	2147389	2147400	0 %	0 %	50 %	50 %	Non-Coding
137	NC_009255	AGCGCG	2	12	2159793	2159804	16.67 %	0 %	50 %	33.33 %	Non-Coding
138	NC_009255	CGCGTG	2	12	2187512	2187523	0 %	16.67 %	50 %	33.33 %	Non-Coding
139	NC_009255	TTCCCC	2	12	2203639	2203650	0 %	33.33 %	0 %	66.67 %	Non-Coding
140	NC_009255	CTCGCC	2	12	2216246	2216257	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
141	NC_009255	CGTCGG	3	18	2222557	2222574	0 %	16.67 %	50 %	33.33 %	Non-Coding
142	NC_009255	GCGCGT	2	12	2229502	2229513	0 %	16.67 %	50 %	33.33 %	Non-Coding
143	NC_009255	GCCGAA	2	12	2229534	2229545	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
144	NC_009255	TCGCTG	2	12	2232727	2232738	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
145	NC_009255	CGAAGC	3	18	2232764	2232781	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
146	NC_009255	TCGCAA	2	12	2232846	2232857	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
147	NC_009255	TCACGG	2	12	2232858	2232869	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
148	NC_009255	ACGCAT	2	12	2234079	2234090	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
149	NC_009255	TATGCA	2	12	2238760	2238771	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
150	NC_009255	CGGCCG	2	12	2240692	2240703	0 %	0 %	50 %	50 %	Non-Coding
151	NC_009255	ACTGTC	2	12	2291254	2291265	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
152	NC_009255	CCGCGC	2	12	2292120	2292131	0 %	0 %	33.33 %	66.67 %	Non-Coding
153	NC_009255	CCCGCG	2	12	2313323	2313334	0 %	0 %	33.33 %	66.67 %	Non-Coding
154	NC_009255	CGCTCG	2	12	2324552	2324563	0 %	16.67 %	33.33 %	50 %	Non-Coding
155	NC_009255	GGAGCC	2	12	2343179	2343190	16.67 %	0 %	50 %	33.33 %	Non-Coding
156	NC_009255	TCGCGC	2	12	2388863	2388874	0 %	16.67 %	33.33 %	50 %	Non-Coding
157	NC_009255	CCGGCG	2	12	2392494	2392505	0 %	0 %	50 %	50 %	Non-Coding
158	NC_009255	TTACCA	2	12	2394352	2394363	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
159	NC_009255	GGCCGG	2	12	2398400	2398411	0 %	0 %	66.67 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.