MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Rhodobacter sphaeroides 2.4.1 plasmid E

Total Repeats: 106

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009008	GCC	2	6	61	66	0 %	0 %	33.33 %	66.67 %	Non-Coding
2	NC_009008	GCG	2	6	623	628	0 %	0 %	66.67 %	33.33 %	Non-Coding
3	NC_009008	GCC	3	9	643	651	0 %	0 %	33.33 %	66.67 %	Non-Coding
4	NC_009008	GCG	2	6	695	700	0 %	0 %	66.67 %	33.33 %	Non-Coding
5	NC_009008	GCC	2	6	741	746	0 %	0 %	33.33 %	66.67 %	Non-Coding
6	NC_009008	CGG	2	6	757	762	0 %	0 %	66.67 %	33.33 %	Non-Coding
7	NC_009008	GGC	2	6	786	791	0 %	0 %	66.67 %	33.33 %	Non-Coding
8	NC_009008	CGG	2	6	1757	1762	0 %	0 %	66.67 %	33.33 %	Non-Coding
9	NC_009008	CCT	2	6	1780	1785	0 %	33.33 %	0 %	66.67 %	Non-Coding
10	NC_009008	CCT	2	6	1795	1800	0 %	33.33 %	0 %	66.67 %	Non-Coding
11	NC_009008	CTC	2	6	1972	1977	0 %	33.33 %	0 %	66.67 %	Non-Coding
12	NC_009008	GCC	2	6	1980	1985	0 %	0 %	33.33 %	66.67 %	Non-Coding
13	NC_009008	CCG	2	6	1989	1994	0 %	0 %	33.33 %	66.67 %	Non-Coding
14	NC_009008	CCG	2	6	2023	2028	0 %	0 %	33.33 %	66.67 %	Non-Coding
15	NC_009008	CGG	2	6	2045	2050	0 %	0 %	66.67 %	33.33 %	Non-Coding
16	NC_009008	GGC	2	6	4429	4434	0 %	0 %	66.67 %	33.33 %	Non-Coding
17	NC_009008	CGG	2	6	4446	4451	0 %	0 %	66.67 %	33.33 %	Non-Coding
18	NC_009008	GCC	2	6	4452	4457	0 %	0 %	33.33 %	66.67 %	Non-Coding
19	NC_009008	CCG	2	6	4524	4529	0 %	0 %	33.33 %	66.67 %	Non-Coding
20	NC_009008	GCC	2	6	5021	5026	0 %	0 %	33.33 %	66.67 %	Non-Coding
21	NC_009008	GAA	2	6	6010	6015	66.67 %	0 %	33.33 %	0 %	Non-Coding
22	NC_009008	GCC	2	6	6112	6117	0 %	0 %	33.33 %	66.67 %	Non-Coding
23	NC_009008	TGA	2	6	6134	6139	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
24	NC_009008	GTC	2	6	6167	6172	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
25	NC_009008	GCC	2	6	6175	6180	0 %	0 %	33.33 %	66.67 %	Non-Coding
26	NC_009008	CAT	2	6	6253	6258	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
27	NC_009008	CTT	2	6	7254	7259	0 %	66.67 %	0 %	33.33 %	Non-Coding
28	NC_009008	GAA	2	6	7320	7325	66.67 %	0 %	33.33 %	0 %	Non-Coding
29	NC_009008	GGA	2	6	8181	8186	33.33 %	0 %	66.67 %	0 %	Non-Coding
30	NC_009008	CCA	2	6	8303	8308	33.33 %	0 %	0 %	66.67 %	Non-Coding
31	NC_009008	ATC	2	6	10379	10384	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_009008	TCG	2	6	11342	11347	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
33	NC_009008	GCC	2	6	11631	11636	0 %	0 %	33.33 %	66.67 %	Non-Coding
34	NC_009008	CCG	2	6	11660	11665	0 %	0 %	33.33 %	66.67 %	Non-Coding
35	NC_009008	CGG	3	9	11823	11831	0 %	0 %	66.67 %	33.33 %	Non-Coding
36	NC_009008	ATC	2	6	11839	11844	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
37	NC_009008	GAC	2	6	11922	11927	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
38	NC_009008	GCG	2	6	11956	11961	0 %	0 %	66.67 %	33.33 %	Non-Coding
39	NC_009008	CGA	2	6	11963	11968	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
40	NC_009008	GAA	2	6	12074	12079	66.67 %	0 %	33.33 %	0 %	Non-Coding
41	NC_009008	TTC	2	6	12291	12296	0 %	66.67 %	0 %	33.33 %	Non-Coding
42	NC_009008	GCA	2	6	12345	12350	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
43	NC_009008	GCT	2	6	12353	12358	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
44	NC_009008	CGA	2	6	12400	12405	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
45	NC_009008	GCC	2	6	12572	12577	0 %	0 %	33.33 %	66.67 %	Non-Coding
46	NC_009008	GAC	2	6	12684	12689	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
47	NC_009008	GCG	2	6	12767	12772	0 %	0 %	66.67 %	33.33 %	Non-Coding
48	NC_009008	AGG	2	6	12927	12932	33.33 %	0 %	66.67 %	0 %	Non-Coding
49	NC_009008	CGG	2	6	12976	12981	0 %	0 %	66.67 %	33.33 %	Non-Coding
50	NC_009008	TGC	3	9	12996	13004	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51	NC_009008	ATG	2	6	13043	13048	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
52	NC_009008	AGG	2	6	13074	13079	33.33 %	0 %	66.67 %	0 %	Non-Coding
53	NC_009008	GCC	2	6	13112	13117	0 %	0 %	33.33 %	66.67 %	Non-Coding
54	NC_009008	GAC	2	6	16858	16863	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
55	NC_009008	CGG	2	6	16869	16874	0 %	0 %	66.67 %	33.33 %	Non-Coding
56	NC_009008	GCC	2	6	16875	16880	0 %	0 %	33.33 %	66.67 %	Non-Coding
57	NC_009008	TCA	2	6	19334	19339	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
58	NC_009008	GCC	2	6	20971	20976	0 %	0 %	33.33 %	66.67 %	Non-Coding
59	NC_009008	TGG	2	6	21023	21028	0 %	33.33 %	66.67 %	0 %	Non-Coding
60	NC_009008	GCG	2	6	21091	21096	0 %	0 %	66.67 %	33.33 %	Non-Coding
61	NC_009008	GTG	2	6	22241	22246	0 %	33.33 %	66.67 %	0 %	Non-Coding
62	NC_009008	GGT	3	9	22288	22296	0 %	33.33 %	66.67 %	0 %	Non-Coding
63	NC_009008	GAC	2	6	22895	22900	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
64	NC_009008	GAC	2	6	24303	24308	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
65	NC_009008	GGT	2	6	24823	24828	0 %	33.33 %	66.67 %	0 %	Non-Coding
66	NC_009008	AGA	2	6	25018	25023	66.67 %	0 %	33.33 %	0 %	Non-Coding
67	NC_009008	CGC	2	6	25169	25174	0 %	0 %	33.33 %	66.67 %	Non-Coding
68	NC_009008	ACT	2	6	25207	25212	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
69	NC_009008	GCC	2	6	25301	25306	0 %	0 %	33.33 %	66.67 %	Non-Coding
70	NC_009008	GGA	2	6	25317	25322	33.33 %	0 %	66.67 %	0 %	Non-Coding
71	NC_009008	CAA	2	6	25339	25344	66.67 %	0 %	0 %	33.33 %	Non-Coding
72	NC_009008	GGC	2	6	25498	25503	0 %	0 %	66.67 %	33.33 %	Non-Coding
73	NC_009008	TCG	2	6	25530	25535	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
74	NC_009008	GAA	2	6	25634	25639	66.67 %	0 %	33.33 %	0 %	Non-Coding
75	NC_009008	GCT	2	6	25665	25670	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
76	NC_009008	CCT	2	6	25875	25880	0 %	33.33 %	0 %	66.67 %	Non-Coding
77	NC_009008	GAG	2	6	25969	25974	33.33 %	0 %	66.67 %	0 %	Non-Coding
78	NC_009008	CAA	2	6	31806	31811	66.67 %	0 %	0 %	33.33 %	Non-Coding
79	NC_009008	GCG	2	6	31825	31830	0 %	0 %	66.67 %	33.33 %	Non-Coding
80	NC_009008	TCG	2	6	32061	32066	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
81	NC_009008	CCG	2	6	32185	32190	0 %	0 %	33.33 %	66.67 %	Non-Coding
82	NC_009008	TAC	2	6	32348	32353	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
83	NC_009008	TTC	2	6	32383	32388	0 %	66.67 %	0 %	33.33 %	Non-Coding
84	NC_009008	GCC	2	6	32672	32677	0 %	0 %	33.33 %	66.67 %	Non-Coding
85	NC_009008	TGA	2	6	32707	32712	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
86	NC_009008	ATT	2	6	32855	32860	33.33 %	66.67 %	0 %	0 %	Non-Coding
87	NC_009008	ACG	2	6	32937	32942	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
88	NC_009008	GAG	2	6	33011	33016	33.33 %	0 %	66.67 %	0 %	Non-Coding
89	NC_009008	GCC	2	6	33077	33082	0 %	0 %	33.33 %	66.67 %	Non-Coding
90	NC_009008	CGG	2	6	33091	33096	0 %	0 %	66.67 %	33.33 %	Non-Coding
91	NC_009008	TCC	2	6	34171	34176	0 %	33.33 %	0 %	66.67 %	Non-Coding
92	NC_009008	CGG	2	6	34245	34250	0 %	0 %	66.67 %	33.33 %	Non-Coding
93	NC_009008	AGT	2	6	34293	34298	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
94	NC_009008	CCA	2	6	34581	34586	33.33 %	0 %	0 %	66.67 %	Non-Coding
95	NC_009008	TGT	2	6	34713	34718	0 %	66.67 %	33.33 %	0 %	Non-Coding
96	NC_009008	CCG	2	6	35378	35383	0 %	0 %	33.33 %	66.67 %	Non-Coding
97	NC_009008	GCC	2	6	35403	35408	0 %	0 %	33.33 %	66.67 %	Non-Coding
98	NC_009008	GCC	3	9	35434	35442	0 %	0 %	33.33 %	66.67 %	Non-Coding
99	NC_009008	TTA	2	6	35497	35502	33.33 %	66.67 %	0 %	0 %	Non-Coding
100	NC_009008	GGA	2	6	35598	35603	33.33 %	0 %	66.67 %	0 %	Non-Coding
101	NC_009008	CGG	2	6	35605	35610	0 %	0 %	66.67 %	33.33 %	Non-Coding
102	NC_009008	TGT	2	6	36669	36674	0 %	66.67 %	33.33 %	0 %	Non-Coding
103	NC_009008	CAA	2	6	36676	36681	66.67 %	0 %	0 %	33.33 %	Non-Coding
104	NC_009008	CGC	2	6	36812	36817	0 %	0 %	33.33 %	66.67 %	Non-Coding
105	NC_009008	CGC	2	6	36864	36869	0 %	0 %	33.33 %	66.67 %	Non-Coding
106	NC_009008	CGT	2	6	36928	36933	0 %	33.33 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.