MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Thermofilum pendens Hrk 5 plasmid pTPEN01

Total Repeats: 45

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008696	AAG	2	6	1720	1725	66.67 %	0 %	33.33 %	0 %	Non-Coding
2	NC_008696	CAC	2	6	3576	3581	33.33 %	0 %	0 %	66.67 %	Non-Coding
3	NC_008696	TCA	2	6	4233	4238	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
4	NC_008696	GGA	2	6	5164	5169	33.33 %	0 %	66.67 %	0 %	Non-Coding
5	NC_008696	GAG	2	6	5626	5631	33.33 %	0 %	66.67 %	0 %	Non-Coding
6	NC_008696	TCT	3	9	5664	5672	0 %	66.67 %	0 %	33.33 %	Non-Coding
7	NC_008696	GGA	2	6	6785	6790	33.33 %	0 %	66.67 %	0 %	Non-Coding
8	NC_008696	AAT	2	6	7650	7655	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_008696	AAG	2	6	7668	7673	66.67 %	0 %	33.33 %	0 %	Non-Coding
10	NC_008696	TCC	2	6	7737	7742	0 %	33.33 %	0 %	66.67 %	Non-Coding
11	NC_008696	GTT	2	6	7849	7854	0 %	66.67 %	33.33 %	0 %	Non-Coding
12	NC_008696	TAT	2	6	7910	7915	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_008696	GAT	2	6	8844	8849	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
14	NC_008696	TCT	2	6	8898	8903	0 %	66.67 %	0 %	33.33 %	Non-Coding
15	NC_008696	GAA	2	6	10586	10591	66.67 %	0 %	33.33 %	0 %	Non-Coding
16	NC_008696	CAC	2	6	10602	10607	33.33 %	0 %	0 %	66.67 %	Non-Coding
17	NC_008696	GCC	2	6	10680	10685	0 %	0 %	33.33 %	66.67 %	Non-Coding
18	NC_008696	GTC	2	6	10700	10705	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19	NC_008696	TCC	2	6	10752	10757	0 %	33.33 %	0 %	66.67 %	Non-Coding
20	NC_008696	AAC	2	6	10785	10790	66.67 %	0 %	0 %	33.33 %	Non-Coding
21	NC_008696	GGT	2	6	10792	10797	0 %	33.33 %	66.67 %	0 %	Non-Coding
22	NC_008696	GAG	2	6	12036	12041	33.33 %	0 %	66.67 %	0 %	Non-Coding
23	NC_008696	GTG	2	6	14294	14299	0 %	33.33 %	66.67 %	0 %	Non-Coding
24	NC_008696	TTC	2	6	19655	19660	0 %	66.67 %	0 %	33.33 %	Non-Coding
25	NC_008696	TTC	2	6	19727	19732	0 %	66.67 %	0 %	33.33 %	Non-Coding
26	NC_008696	TAA	2	6	19786	19791	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_008696	TTA	2	6	22136	22141	33.33 %	66.67 %	0 %	0 %	Non-Coding
28	NC_008696	AAG	2	6	22158	22163	66.67 %	0 %	33.33 %	0 %	Non-Coding
29	NC_008696	TAT	2	6	22307	22312	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_008696	CGA	2	6	22334	22339	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
31	NC_008696	CTT	2	6	22638	22643	0 %	66.67 %	0 %	33.33 %	Non-Coding
32	NC_008696	TCC	2	6	22644	22649	0 %	33.33 %	0 %	66.67 %	Non-Coding
33	NC_008696	CTT	2	6	22674	22679	0 %	66.67 %	0 %	33.33 %	Non-Coding
34	NC_008696	TAA	2	6	23568	23573	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_008696	CTC	2	6	23659	23664	0 %	33.33 %	0 %	66.67 %	Non-Coding
36	NC_008696	TCA	2	6	23685	23690	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
37	NC_008696	TAA	2	6	24218	24223	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_008696	CTC	2	6	24290	24295	0 %	33.33 %	0 %	66.67 %	Non-Coding
39	NC_008696	TCA	2	6	24317	24322	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40	NC_008696	TAA	2	6	25028	25033	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_008696	CTC	2	6	25808	25813	0 %	33.33 %	0 %	66.67 %	Non-Coding
42	NC_008696	TAA	2	6	26146	26151	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_008696	CTT	2	6	28359	28364	0 %	66.67 %	0 %	33.33 %	Non-Coding
44	NC_008696	GTA	2	6	29592	29597	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
45	NC_008696	CCT	2	6	29600	29605	0 %	33.33 %	0 %	66.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.