Penta-nucleotide Non-Coding Repeats of Burkholderia cenocepacia HI2424 chromosome 3
Total Repeats: 160
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008544 | AGCCG | 2 | 10 | 23 | 32 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
2 | NC_008544 | ATCGA | 2 | 10 | 5775 | 5784 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
3 | NC_008544 | CATTG | 2 | 10 | 9424 | 9433 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
4 | NC_008544 | AATTC | 2 | 10 | 22827 | 22836 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
5 | NC_008544 | CATTG | 2 | 10 | 24013 | 24022 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
6 | NC_008544 | CAAAA | 2 | 10 | 39841 | 39850 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
7 | NC_008544 | AAGGA | 2 | 10 | 40927 | 40936 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
8 | NC_008544 | TGCGC | 2 | 10 | 62515 | 62524 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
9 | NC_008544 | TGCCG | 2 | 10 | 62585 | 62594 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
10 | NC_008544 | GCGTG | 2 | 10 | 68650 | 68659 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
11 | NC_008544 | CATCC | 2 | 10 | 76649 | 76658 | 20 % | 20 % | 0 % | 60 % | Non-Coding |
12 | NC_008544 | CCGCG | 2 | 10 | 90360 | 90369 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
13 | NC_008544 | CATCG | 2 | 10 | 90391 | 90400 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
14 | NC_008544 | GGGCC | 2 | 10 | 95134 | 95143 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
15 | NC_008544 | GGCGC | 2 | 10 | 106204 | 106213 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
16 | NC_008544 | GGCGC | 2 | 10 | 114760 | 114769 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
17 | NC_008544 | GCCGC | 2 | 10 | 120796 | 120805 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
18 | NC_008544 | TGACG | 2 | 10 | 129375 | 129384 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
19 | NC_008544 | ATTGG | 2 | 10 | 138466 | 138475 | 20 % | 40 % | 40 % | 0 % | Non-Coding |
20 | NC_008544 | TGATT | 2 | 10 | 140169 | 140178 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
21 | NC_008544 | TCGCA | 2 | 10 | 141169 | 141178 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
22 | NC_008544 | GCCGC | 3 | 15 | 145142 | 145156 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
23 | NC_008544 | CGCGC | 2 | 10 | 146738 | 146747 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
24 | NC_008544 | CAACT | 2 | 10 | 155887 | 155896 | 40 % | 20 % | 0 % | 40 % | Non-Coding |
25 | NC_008544 | TCCGC | 2 | 10 | 177351 | 177360 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
26 | NC_008544 | TCGCG | 2 | 10 | 177398 | 177407 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
27 | NC_008544 | GATGC | 2 | 10 | 181319 | 181328 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
28 | NC_008544 | TTCGA | 2 | 10 | 186101 | 186110 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
29 | NC_008544 | CGGAC | 2 | 10 | 195563 | 195572 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
30 | NC_008544 | TGTCG | 2 | 10 | 196097 | 196106 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
31 | NC_008544 | CGCGG | 2 | 10 | 199331 | 199340 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
32 | NC_008544 | CAGTG | 2 | 10 | 201428 | 201437 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
33 | NC_008544 | CTCCC | 2 | 10 | 209414 | 209423 | 0 % | 20 % | 0 % | 80 % | Non-Coding |
34 | NC_008544 | GCCGC | 2 | 10 | 210439 | 210448 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
35 | NC_008544 | CGATG | 2 | 10 | 215576 | 215585 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
36 | NC_008544 | CCCGC | 2 | 10 | 217176 | 217185 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
37 | NC_008544 | CAGCG | 2 | 10 | 234205 | 234214 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
38 | NC_008544 | GCGCG | 2 | 10 | 237015 | 237024 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
39 | NC_008544 | CGGTT | 2 | 10 | 238658 | 238667 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
40 | NC_008544 | AGAAA | 2 | 10 | 261013 | 261022 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
41 | NC_008544 | TGCGA | 2 | 10 | 261158 | 261167 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
42 | NC_008544 | TCGCG | 2 | 10 | 280504 | 280513 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
43 | NC_008544 | GCCGG | 2 | 10 | 291097 | 291106 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
44 | NC_008544 | GCCGC | 2 | 10 | 297408 | 297417 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
45 | NC_008544 | TCGGC | 2 | 10 | 319640 | 319649 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
46 | NC_008544 | CGCAC | 2 | 10 | 323587 | 323596 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
47 | NC_008544 | CACGC | 2 | 10 | 338636 | 338645 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
48 | NC_008544 | CGGGC | 2 | 10 | 348398 | 348407 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
49 | NC_008544 | TAGAG | 2 | 10 | 352093 | 352102 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
50 | NC_008544 | CTCCC | 2 | 10 | 353390 | 353399 | 0 % | 20 % | 0 % | 80 % | Non-Coding |
51 | NC_008544 | CAGGG | 2 | 10 | 360413 | 360422 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
52 | NC_008544 | GGCCG | 2 | 10 | 367348 | 367357 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
53 | NC_008544 | CCCCG | 2 | 10 | 375523 | 375532 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
54 | NC_008544 | CCGGT | 2 | 10 | 385097 | 385106 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
55 | NC_008544 | TGCCG | 2 | 10 | 387414 | 387423 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
56 | NC_008544 | CGGCC | 2 | 10 | 388226 | 388235 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
57 | NC_008544 | CGGGC | 2 | 10 | 388246 | 388255 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
58 | NC_008544 | TCGTG | 2 | 10 | 397205 | 397214 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
59 | NC_008544 | GCGAA | 2 | 10 | 398371 | 398380 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
60 | NC_008544 | GGGAG | 2 | 10 | 398689 | 398698 | 20 % | 0 % | 80 % | 0 % | Non-Coding |
61 | NC_008544 | CTCAT | 2 | 10 | 400688 | 400697 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
62 | NC_008544 | CGGTG | 2 | 10 | 403322 | 403331 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
63 | NC_008544 | TCGCA | 3 | 15 | 408238 | 408252 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
64 | NC_008544 | TCGCG | 2 | 10 | 409099 | 409108 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
65 | NC_008544 | CGCAC | 2 | 10 | 412119 | 412128 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
66 | NC_008544 | ATGCG | 2 | 10 | 421139 | 421148 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
67 | NC_008544 | GCGCA | 2 | 10 | 427995 | 428004 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
68 | NC_008544 | CGCGC | 2 | 10 | 430171 | 430180 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
69 | NC_008544 | TCGTT | 2 | 10 | 432509 | 432518 | 0 % | 60 % | 20 % | 20 % | Non-Coding |
70 | NC_008544 | GCCGG | 2 | 10 | 438063 | 438072 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
71 | NC_008544 | CCGTA | 2 | 10 | 454398 | 454407 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
72 | NC_008544 | AGCGG | 2 | 10 | 498766 | 498775 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
73 | NC_008544 | CGGCG | 2 | 10 | 519981 | 519990 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
74 | NC_008544 | GACCC | 2 | 10 | 519993 | 520002 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
75 | NC_008544 | CATCG | 2 | 10 | 520145 | 520154 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
76 | NC_008544 | CGGCC | 2 | 10 | 525539 | 525548 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
77 | NC_008544 | GCGGA | 2 | 10 | 525636 | 525645 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
78 | NC_008544 | TGGAA | 2 | 10 | 530998 | 531007 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
79 | NC_008544 | CCGGC | 2 | 10 | 546106 | 546115 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
80 | NC_008544 | GGGCG | 2 | 10 | 547311 | 547320 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
81 | NC_008544 | GCCGC | 2 | 10 | 548748 | 548757 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
82 | NC_008544 | CGCGC | 2 | 10 | 561962 | 561971 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
83 | NC_008544 | GAAAA | 2 | 10 | 562992 | 563001 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
84 | NC_008544 | CGGCG | 2 | 10 | 565267 | 565276 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
85 | NC_008544 | CAGCG | 2 | 10 | 579421 | 579430 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
86 | NC_008544 | GCCGC | 2 | 10 | 581983 | 581992 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
87 | NC_008544 | CCGGC | 2 | 10 | 587771 | 587780 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
88 | NC_008544 | TTCCC | 2 | 10 | 587808 | 587817 | 0 % | 40 % | 0 % | 60 % | Non-Coding |
89 | NC_008544 | CGGCG | 2 | 10 | 590574 | 590583 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
90 | NC_008544 | CGGGG | 2 | 10 | 594552 | 594561 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
91 | NC_008544 | GCGTC | 2 | 10 | 596362 | 596371 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
92 | NC_008544 | ATTGA | 2 | 10 | 599598 | 599607 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
93 | NC_008544 | GCCAT | 2 | 10 | 599694 | 599703 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
94 | NC_008544 | GGCGG | 2 | 10 | 608276 | 608285 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
95 | NC_008544 | CGGCA | 2 | 10 | 611154 | 611163 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
96 | NC_008544 | TTGCG | 2 | 10 | 611224 | 611233 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
97 | NC_008544 | GTAGT | 2 | 10 | 612194 | 612203 | 20 % | 40 % | 40 % | 0 % | Non-Coding |
98 | NC_008544 | CGGGT | 2 | 10 | 625413 | 625422 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
99 | NC_008544 | TGCGA | 2 | 10 | 633745 | 633754 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
100 | NC_008544 | TGCGG | 2 | 10 | 639125 | 639134 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
101 | NC_008544 | GGCGT | 2 | 10 | 639227 | 639236 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
102 | NC_008544 | GCCGG | 2 | 10 | 639346 | 639355 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
103 | NC_008544 | GCGCG | 2 | 10 | 639435 | 639444 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
104 | NC_008544 | GCTTC | 2 | 10 | 644074 | 644083 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
105 | NC_008544 | CGGCG | 2 | 10 | 644368 | 644377 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
106 | NC_008544 | CCGCG | 2 | 10 | 645852 | 645861 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
107 | NC_008544 | GCGCG | 2 | 10 | 654835 | 654844 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
108 | NC_008544 | GGCCG | 2 | 10 | 670983 | 670992 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
109 | NC_008544 | CGCGT | 2 | 10 | 673387 | 673396 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
110 | NC_008544 | CGCGG | 2 | 10 | 675961 | 675970 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
111 | NC_008544 | CGCGA | 2 | 10 | 676447 | 676456 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
112 | NC_008544 | GCGCG | 2 | 10 | 685120 | 685129 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
113 | NC_008544 | GGGCG | 2 | 10 | 686229 | 686238 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
114 | NC_008544 | GGGCC | 2 | 10 | 686802 | 686811 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
115 | NC_008544 | GCCGC | 2 | 10 | 688863 | 688872 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
116 | NC_008544 | CGAAC | 2 | 10 | 689721 | 689730 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
117 | NC_008544 | CGCAG | 2 | 10 | 699605 | 699614 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
118 | NC_008544 | CGGCA | 2 | 10 | 701269 | 701278 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
119 | NC_008544 | TCGAT | 2 | 10 | 733168 | 733177 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
120 | NC_008544 | CGCGA | 2 | 10 | 733192 | 733201 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
121 | NC_008544 | GCCGC | 2 | 10 | 745334 | 745343 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
122 | NC_008544 | GTCGC | 2 | 10 | 752961 | 752970 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
123 | NC_008544 | GCCGC | 2 | 10 | 768778 | 768787 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
124 | NC_008544 | GCCCG | 2 | 10 | 768919 | 768928 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
125 | NC_008544 | CGGGC | 2 | 10 | 770322 | 770331 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
126 | NC_008544 | CGGCG | 2 | 10 | 779008 | 779017 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
127 | NC_008544 | CAGGC | 2 | 10 | 779106 | 779115 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
128 | NC_008544 | CCCGT | 2 | 10 | 780662 | 780671 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
129 | NC_008544 | CGTGC | 2 | 10 | 800338 | 800347 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
130 | NC_008544 | GGTGC | 2 | 10 | 816775 | 816784 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
131 | NC_008544 | CGGCA | 2 | 10 | 818662 | 818671 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
132 | NC_008544 | GCGCC | 2 | 10 | 818706 | 818715 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
133 | NC_008544 | CGCGG | 2 | 10 | 820008 | 820017 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
134 | NC_008544 | GCGCG | 2 | 10 | 830022 | 830031 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
135 | NC_008544 | CGGGT | 2 | 10 | 841635 | 841644 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
136 | NC_008544 | TCGCC | 2 | 10 | 847274 | 847283 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
137 | NC_008544 | ACCTC | 2 | 10 | 847473 | 847482 | 20 % | 20 % | 0 % | 60 % | Non-Coding |
138 | NC_008544 | TTCGT | 2 | 10 | 852968 | 852977 | 0 % | 60 % | 20 % | 20 % | Non-Coding |
139 | NC_008544 | GCGCC | 2 | 10 | 868193 | 868202 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
140 | NC_008544 | CGCGG | 2 | 10 | 888583 | 888592 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
141 | NC_008544 | GCGAC | 2 | 10 | 888650 | 888659 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
142 | NC_008544 | GTGGC | 2 | 10 | 895040 | 895049 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
143 | NC_008544 | ACTTA | 2 | 10 | 896081 | 896090 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
144 | NC_008544 | CACCG | 2 | 10 | 905155 | 905164 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
145 | NC_008544 | GACGC | 2 | 10 | 913018 | 913027 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
146 | NC_008544 | CGTCA | 2 | 10 | 913059 | 913068 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
147 | NC_008544 | GCGCC | 2 | 10 | 913948 | 913957 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
148 | NC_008544 | GGCCG | 2 | 10 | 922897 | 922906 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
149 | NC_008544 | GATGC | 2 | 10 | 925298 | 925307 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
150 | NC_008544 | GGCGA | 2 | 10 | 926837 | 926846 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
151 | NC_008544 | GCCGC | 2 | 10 | 952524 | 952533 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
152 | NC_008544 | CCGCG | 2 | 10 | 956511 | 956520 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
153 | NC_008544 | AGTGA | 2 | 10 | 958928 | 958937 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
154 | NC_008544 | TGCCG | 2 | 10 | 959044 | 959053 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
155 | NC_008544 | CCGTG | 2 | 10 | 969233 | 969242 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
156 | NC_008544 | TCCCC | 2 | 10 | 969249 | 969258 | 0 % | 20 % | 0 % | 80 % | Non-Coding |
157 | NC_008544 | CATGC | 2 | 10 | 978582 | 978591 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
158 | NC_008544 | GCCGC | 2 | 10 | 988460 | 988469 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
159 | NC_008544 | TCGCG | 2 | 10 | 995668 | 995677 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
160 | NC_008544 | TGCCG | 2 | 10 | 1042928 | 1042937 | 0 % | 20 % | 40 % | 40 % | Non-Coding |