MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Candidatus Carsonella ruddii PV

Total Repeats: 140

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008512	AAT	2	6	9064	9069	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_008512	TAA	2	6	9072	9077	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_008512	ATT	2	6	13897	13902	33.33 %	66.67 %	0 %	0 %	Non-Coding
4	NC_008512	TTA	2	6	13969	13974	33.33 %	66.67 %	0 %	0 %	Non-Coding
5	NC_008512	TAT	2	6	24607	24612	33.33 %	66.67 %	0 %	0 %	Non-Coding
6	NC_008512	TAT	2	6	30210	30215	33.33 %	66.67 %	0 %	0 %	Non-Coding
7	NC_008512	TAG	2	6	30232	30237	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8	NC_008512	TTA	2	6	30263	30268	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_008512	TAA	2	6	30284	30289	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_008512	TAA	2	6	35384	35389	66.67 %	33.33 %	0 %	0 %	Non-Coding
11	NC_008512	CGG	2	6	35428	35433	0 %	0 %	66.67 %	33.33 %	Non-Coding
12	NC_008512	AAT	2	6	37291	37296	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_008512	ATA	2	6	37364	37369	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_008512	ATA	2	6	37458	37463	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_008512	AGT	2	6	37636	37641	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
16	NC_008512	ATC	2	6	37669	37674	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_008512	TAT	2	6	38201	38206	33.33 %	66.67 %	0 %	0 %	Non-Coding
18	NC_008512	ATT	3	9	38213	38221	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_008512	ATT	2	6	41689	41694	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_008512	ATT	2	6	42438	42443	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_008512	TAT	2	6	42454	42459	33.33 %	66.67 %	0 %	0 %	Non-Coding
22	NC_008512	ATA	2	6	42469	42474	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_008512	TAA	2	6	48085	48090	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_008512	TAA	2	6	48165	48170	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_008512	ATT	2	6	48171	48176	33.33 %	66.67 %	0 %	0 %	Non-Coding
26	NC_008512	TAA	2	6	48288	48293	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_008512	TAG	2	6	48308	48313	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
28	NC_008512	TTA	2	6	48375	48380	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_008512	ATT	3	9	48384	48392	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_008512	TAA	3	9	48460	48468	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_008512	ATA	2	6	48484	48489	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_008512	TAA	2	6	48506	48511	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_008512	GGT	2	6	53202	53207	0 %	33.33 %	66.67 %	0 %	Non-Coding
34	NC_008512	TAG	2	6	53314	53319	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
35	NC_008512	TTA	2	6	53440	53445	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_008512	ATT	2	6	53474	53479	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_008512	TTG	2	6	53495	53500	0 %	66.67 %	33.33 %	0 %	Non-Coding
38	NC_008512	ATT	2	6	53511	53516	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_008512	ATA	3	9	54390	54398	66.67 %	33.33 %	0 %	0 %	Non-Coding
40	NC_008512	AGT	2	6	56245	56250	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
41	NC_008512	GTA	2	6	61180	61185	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
42	NC_008512	GTT	2	6	65376	65381	0 %	66.67 %	33.33 %	0 %	Non-Coding
43	NC_008512	TAT	2	6	65390	65395	33.33 %	66.67 %	0 %	0 %	Non-Coding
44	NC_008512	ATT	2	6	67112	67117	33.33 %	66.67 %	0 %	0 %	Non-Coding
45	NC_008512	ATT	2	6	67169	67174	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_008512	AAT	2	6	67200	67205	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_008512	ATT	2	6	67240	67245	33.33 %	66.67 %	0 %	0 %	Non-Coding
48	NC_008512	TTA	2	6	67390	67395	33.33 %	66.67 %	0 %	0 %	Non-Coding
49	NC_008512	TAT	2	6	67439	67444	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_008512	TTA	2	6	67552	67557	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_008512	ATT	3	9	67559	67567	33.33 %	66.67 %	0 %	0 %	Non-Coding
52	NC_008512	ATA	2	6	67579	67584	66.67 %	33.33 %	0 %	0 %	Non-Coding
53	NC_008512	TAA	2	6	67632	67637	66.67 %	33.33 %	0 %	0 %	Non-Coding
54	NC_008512	TGT	2	6	67653	67658	0 %	66.67 %	33.33 %	0 %	Non-Coding
55	NC_008512	TAT	3	9	67661	67669	33.33 %	66.67 %	0 %	0 %	Non-Coding
56	NC_008512	ATA	2	6	67690	67695	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_008512	TTA	2	6	67736	67741	33.33 %	66.67 %	0 %	0 %	Non-Coding
58	NC_008512	TAA	2	6	67769	67774	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_008512	ATT	2	6	69516	69521	33.33 %	66.67 %	0 %	0 %	Non-Coding
60	NC_008512	TAA	2	6	81019	81024	66.67 %	33.33 %	0 %	0 %	Non-Coding
61	NC_008512	AAT	2	6	83601	83606	66.67 %	33.33 %	0 %	0 %	Non-Coding
62	NC_008512	AAT	2	6	83712	83717	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_008512	TTC	2	6	83785	83790	0 %	66.67 %	0 %	33.33 %	Non-Coding
64	NC_008512	AAT	2	6	83868	83873	66.67 %	33.33 %	0 %	0 %	Non-Coding
65	NC_008512	ATA	2	6	83950	83955	66.67 %	33.33 %	0 %	0 %	Non-Coding
66	NC_008512	ATT	2	6	83959	83964	33.33 %	66.67 %	0 %	0 %	Non-Coding
67	NC_008512	TAA	2	6	84319	84324	66.67 %	33.33 %	0 %	0 %	Non-Coding
68	NC_008512	AAT	2	6	84360	84365	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_008512	TTA	2	6	84375	84380	33.33 %	66.67 %	0 %	0 %	Non-Coding
70	NC_008512	TAG	2	6	93365	93370	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
71	NC_008512	ATT	2	6	105395	105400	33.33 %	66.67 %	0 %	0 %	Non-Coding
72	NC_008512	ATT	2	6	105453	105458	33.33 %	66.67 %	0 %	0 %	Non-Coding
73	NC_008512	TAA	2	6	105545	105550	66.67 %	33.33 %	0 %	0 %	Non-Coding
74	NC_008512	ATT	2	6	105560	105565	33.33 %	66.67 %	0 %	0 %	Non-Coding
75	NC_008512	CAA	2	6	105679	105684	66.67 %	0 %	0 %	33.33 %	Non-Coding
76	NC_008512	AGT	2	6	105734	105739	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
77	NC_008512	AAC	2	6	105780	105785	66.67 %	0 %	0 %	33.33 %	Non-Coding
78	NC_008512	ACG	2	6	105883	105888	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
79	NC_008512	TGA	2	6	105963	105968	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
80	NC_008512	CTC	2	6	106197	106202	0 %	33.33 %	0 %	66.67 %	Non-Coding
81	NC_008512	AGG	2	6	106214	106219	33.33 %	0 %	66.67 %	0 %	Non-Coding
82	NC_008512	CAC	2	6	106242	106247	33.33 %	0 %	0 %	66.67 %	Non-Coding
83	NC_008512	ACT	2	6	106318	106323	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
84	NC_008512	CAT	2	6	106495	106500	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
85	NC_008512	GCC	2	6	106570	106575	0 %	0 %	33.33 %	66.67 %	Non-Coding
86	NC_008512	TTA	2	6	106590	106595	33.33 %	66.67 %	0 %	0 %	Non-Coding
87	NC_008512	TAA	2	6	106698	106703	66.67 %	33.33 %	0 %	0 %	Non-Coding
88	NC_008512	TAT	2	6	106935	106940	33.33 %	66.67 %	0 %	0 %	Non-Coding
89	NC_008512	TTC	2	6	107030	107035	0 %	66.67 %	0 %	33.33 %	Non-Coding
90	NC_008512	ATT	2	6	107221	107226	33.33 %	66.67 %	0 %	0 %	Non-Coding
91	NC_008512	AAT	2	6	107231	107236	66.67 %	33.33 %	0 %	0 %	Non-Coding
92	NC_008512	TCT	2	6	107237	107242	0 %	66.67 %	0 %	33.33 %	Non-Coding
93	NC_008512	AAT	2	6	107273	107278	66.67 %	33.33 %	0 %	0 %	Non-Coding
94	NC_008512	GCT	2	6	107369	107374	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
95	NC_008512	CAT	2	6	107410	107415	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
96	NC_008512	GTT	2	6	107459	107464	0 %	66.67 %	33.33 %	0 %	Non-Coding
97	NC_008512	TAA	2	6	107508	107513	66.67 %	33.33 %	0 %	0 %	Non-Coding
98	NC_008512	AAT	2	6	107514	107519	66.67 %	33.33 %	0 %	0 %	Non-Coding
99	NC_008512	TAT	2	6	107520	107525	33.33 %	66.67 %	0 %	0 %	Non-Coding
100	NC_008512	AAT	2	6	107576	107581	66.67 %	33.33 %	0 %	0 %	Non-Coding
101	NC_008512	TAT	2	6	107582	107587	33.33 %	66.67 %	0 %	0 %	Non-Coding
102	NC_008512	ATC	2	6	107667	107672	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
103	NC_008512	TCC	2	6	107702	107707	0 %	33.33 %	0 %	66.67 %	Non-Coding
104	NC_008512	ATT	2	6	108054	108059	33.33 %	66.67 %	0 %	0 %	Non-Coding
105	NC_008512	ATT	2	6	108103	108108	33.33 %	66.67 %	0 %	0 %	Non-Coding
106	NC_008512	CTT	2	6	108150	108155	0 %	66.67 %	0 %	33.33 %	Non-Coding
107	NC_008512	ACT	2	6	108170	108175	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
108	NC_008512	AGT	2	6	108269	108274	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
109	NC_008512	TAA	2	6	108509	108514	66.67 %	33.33 %	0 %	0 %	Non-Coding
110	NC_008512	AAT	2	6	108666	108671	66.67 %	33.33 %	0 %	0 %	Non-Coding
111	NC_008512	TAT	2	6	108716	108721	33.33 %	66.67 %	0 %	0 %	Non-Coding
112	NC_008512	ATG	2	6	108759	108764	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
113	NC_008512	CGT	2	6	108771	108776	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
114	NC_008512	TCC	2	6	108785	108790	0 %	33.33 %	0 %	66.67 %	Non-Coding
115	NC_008512	TTA	2	6	108811	108816	33.33 %	66.67 %	0 %	0 %	Non-Coding
116	NC_008512	GAC	2	6	108896	108901	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
117	NC_008512	GCA	2	6	108908	108913	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
118	NC_008512	TTC	2	6	109278	109283	0 %	66.67 %	0 %	33.33 %	Non-Coding
119	NC_008512	TCT	2	6	109326	109331	0 %	66.67 %	0 %	33.33 %	Non-Coding
120	NC_008512	TTA	2	6	109363	109368	33.33 %	66.67 %	0 %	0 %	Non-Coding
121	NC_008512	AAT	2	6	109429	109434	66.67 %	33.33 %	0 %	0 %	Non-Coding
122	NC_008512	GCT	2	6	109469	109474	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
123	NC_008512	CTT	2	6	109494	109499	0 %	66.67 %	0 %	33.33 %	Non-Coding
124	NC_008512	TAA	2	6	109500	109505	66.67 %	33.33 %	0 %	0 %	Non-Coding
125	NC_008512	CTT	2	6	109544	109549	0 %	66.67 %	0 %	33.33 %	Non-Coding
126	NC_008512	CTT	2	6	109582	109587	0 %	66.67 %	0 %	33.33 %	Non-Coding
127	NC_008512	CTG	2	6	109641	109646	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
128	NC_008512	GTT	2	6	109687	109692	0 %	66.67 %	33.33 %	0 %	Non-Coding
129	NC_008512	AAC	2	6	109742	109747	66.67 %	0 %	0 %	33.33 %	Non-Coding
130	NC_008512	TAA	2	6	109811	109816	66.67 %	33.33 %	0 %	0 %	Non-Coding
131	NC_008512	GCT	2	6	109887	109892	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
132	NC_008512	ATA	2	6	109995	110000	66.67 %	33.33 %	0 %	0 %	Non-Coding
133	NC_008512	ATT	2	6	116576	116581	33.33 %	66.67 %	0 %	0 %	Non-Coding
134	NC_008512	TAT	2	6	146955	146960	33.33 %	66.67 %	0 %	0 %	Non-Coding
135	NC_008512	ATA	2	6	147066	147071	66.67 %	33.33 %	0 %	0 %	Non-Coding
136	NC_008512	GAA	2	6	147100	147105	66.67 %	0 %	33.33 %	0 %	Non-Coding
137	NC_008512	GCA	2	6	147133	147138	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
138	NC_008512	TCT	2	6	147175	147180	0 %	66.67 %	0 %	33.33 %	Non-Coding
139	NC_008512	GTT	2	6	147214	147219	0 %	66.67 %	33.33 %	0 %	Non-Coding
140	NC_008512	TAA	2	6	158637	158642	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.