MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome chromosome 2

Total Repeats: 34

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008511	GCGGAA	2	12	26696	26707	33.33 %	0 %	50 %	16.67 %	Non-Coding
2	NC_008511	GATTTT	2	12	27050	27061	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
3	NC_008511	TTTACG	2	12	27382	27393	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
4	NC_008511	AAGGTG	2	12	31808	31819	33.33 %	16.67 %	50 %	0 %	Non-Coding
5	NC_008511	GATTTT	2	12	35010	35021	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
6	NC_008511	TATAAA	2	12	42348	42359	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_008511	AGAAGG	2	12	63112	63123	50 %	0 %	50 %	0 %	Non-Coding
8	NC_008511	GAATTA	2	12	73600	73611	50 %	33.33 %	16.67 %	0 %	Non-Coding
9	NC_008511	AAAATA	2	12	76988	76999	83.33 %	16.67 %	0 %	0 %	Non-Coding
10	NC_008511	TAAAAT	2	12	78784	78795	66.67 %	33.33 %	0 %	0 %	Non-Coding
11	NC_008511	AATTTT	2	12	78809	78820	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_008511	AGTCCG	2	12	87449	87460	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
13	NC_008511	AAAAAG	2	12	90926	90937	83.33 %	0 %	16.67 %	0 %	Non-Coding
14	NC_008511	TCGACG	2	12	91679	91690	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
15	NC_008511	AAAAGG	2	12	91818	91829	66.67 %	0 %	33.33 %	0 %	Non-Coding
16	NC_008511	TTCATT	2	12	106510	106521	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
17	NC_008511	ATCGGC	2	12	115239	115250	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
18	NC_008511	TTCATT	2	12	121944	121955	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
19	NC_008511	GATCCA	2	12	164251	164262	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
20	NC_008511	GAATTG	2	12	164305	164316	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
21	NC_008511	ACTTCC	2	12	164439	164450	16.67 %	33.33 %	0 %	50 %	Non-Coding
22	NC_008511	TTAGAA	2	12	184407	184418	50 %	33.33 %	16.67 %	0 %	Non-Coding
23	NC_008511	GTTTTG	2	12	188241	188252	0 %	66.67 %	33.33 %	0 %	Non-Coding
24	NC_008511	AGATAA	2	12	204237	204248	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
25	NC_008511	AATTTT	2	12	206071	206082	33.33 %	66.67 %	0 %	0 %	Non-Coding
26	NC_008511	AAGGTG	2	12	229956	229967	33.33 %	16.67 %	50 %	0 %	Non-Coding
27	NC_008511	CAATCA	2	12	236561	236572	50 %	16.67 %	0 %	33.33 %	Non-Coding
28	NC_008511	GAAACA	2	12	237483	237494	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
29	NC_008511	CTTTTT	2	12	244887	244898	0 %	83.33 %	0 %	16.67 %	Non-Coding
30	NC_008511	CGTTTC	2	12	246127	246138	0 %	50 %	16.67 %	33.33 %	Non-Coding
31	NC_008511	AAAACG	2	12	277365	277376	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
32	NC_008511	CGCCTT	2	12	277715	277726	0 %	33.33 %	16.67 %	50 %	Non-Coding
33	NC_008511	GTGTTT	2	12	281806	281817	0 %	66.67 %	33.33 %	0 %	Non-Coding
34	NC_008511	TCGTTC	2	12	297178	297189	0 %	50 %	16.67 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.