MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome chromosome 2

Total Repeats: 43

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008509	GCGGAA	2	12	26696	26707	33.33 %	0 %	50 %	16.67 %	Non-Coding
2	NC_008509	GATTTT	2	12	27050	27061	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
3	NC_008509	TTTACG	2	12	27382	27393	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
4	NC_008509	AAGGTG	2	12	31808	31819	33.33 %	16.67 %	50 %	0 %	Non-Coding
5	NC_008509	GATTTT	2	12	35010	35021	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
6	NC_008509	TATAAA	2	12	42348	42359	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_008509	AGAAGG	2	12	63111	63122	50 %	0 %	50 %	0 %	Non-Coding
8	NC_008509	GAATTA	2	12	73598	73609	50 %	33.33 %	16.67 %	0 %	Non-Coding
9	NC_008509	AAAATA	2	12	76986	76997	83.33 %	16.67 %	0 %	0 %	Non-Coding
10	NC_008509	AATTCA	2	12	77268	77279	50 %	33.33 %	0 %	16.67 %	Non-Coding
11	NC_008509	TCAAAA	2	12	77442	77453	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
12	NC_008509	TAAAAT	2	12	78517	78528	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_008509	AATTTT	2	12	78542	78553	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_008509	AATTAT	2	12	85420	85431	50 %	50 %	0 %	0 %	Non-Coding
15	NC_008509	TGCAAT	2	12	87593	87604	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
16	NC_008509	AAAACA	2	12	88094	88105	83.33 %	0 %	0 %	16.67 %	Non-Coding
17	NC_008509	ATTCAA	2	12	88183	88194	50 %	33.33 %	0 %	16.67 %	Non-Coding
18	NC_008509	ATTTTT	2	12	88471	88482	16.67 %	83.33 %	0 %	0 %	Non-Coding
19	NC_008509	TGTTCT	2	12	97239	97250	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
20	NC_008509	ACATTT	2	12	97317	97328	33.33 %	50 %	0 %	16.67 %	Non-Coding
21	NC_008509	TCAACC	2	12	101712	101723	33.33 %	16.67 %	0 %	50 %	Non-Coding
22	NC_008509	AGTCCG	2	12	105765	105776	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
23	NC_008509	AAAAAG	2	12	109242	109253	83.33 %	0 %	16.67 %	0 %	Non-Coding
24	NC_008509	TCGACG	2	12	109995	110006	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
25	NC_008509	AAAAGG	2	12	110134	110145	66.67 %	0 %	33.33 %	0 %	Non-Coding
26	NC_008509	TCCTTC	2	12	116751	116762	0 %	50 %	0 %	50 %	Non-Coding
27	NC_008509	TTCATT	2	12	123822	123833	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
28	NC_008509	ATCGGC	2	12	132552	132563	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
29	NC_008509	GATCCA	2	12	181509	181520	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
30	NC_008509	GAATTG	2	12	181671	181682	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
31	NC_008509	ACTTCC	2	12	181805	181816	16.67 %	33.33 %	0 %	50 %	Non-Coding
32	NC_008509	TTAGAA	2	12	201773	201784	50 %	33.33 %	16.67 %	0 %	Non-Coding
33	NC_008509	GTTTTG	2	12	205607	205618	0 %	66.67 %	33.33 %	0 %	Non-Coding
34	NC_008509	AATTTT	2	12	223436	223447	33.33 %	66.67 %	0 %	0 %	Non-Coding
35	NC_008509	AAGGTG	2	12	247514	247525	33.33 %	16.67 %	50 %	0 %	Non-Coding
36	NC_008509	CAATCA	2	12	254118	254129	50 %	16.67 %	0 %	33.33 %	Non-Coding
37	NC_008509	GAAACA	2	12	255040	255051	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
38	NC_008509	CTTTTT	2	12	262444	262455	0 %	83.33 %	0 %	16.67 %	Non-Coding
39	NC_008509	ATGGGA	2	12	271942	271953	33.33 %	16.67 %	50 %	0 %	Non-Coding
40	NC_008509	AAAACG	2	12	294941	294952	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
41	NC_008509	CGCCTT	2	12	295291	295302	0 %	33.33 %	16.67 %	50 %	Non-Coding
42	NC_008509	GTGTTT	2	12	299381	299392	0 %	66.67 %	33.33 %	0 %	Non-Coding
43	NC_008509	TCGTTC	2	12	314752	314763	0 %	50 %	16.67 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.