MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Coding Repeats of Roseobacter denitrificans plasmid pTB4

Total Repeats: 34

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008389	ATG	2	6	898	903	33.33 %	33.33 %	33.33 %	0 %	115345713
2	NC_008389	GGA	2	6	1057	1062	33.33 %	0 %	66.67 %	0 %	115345714
3	NC_008389	CGG	2	6	1121	1126	0 %	0 %	66.67 %	33.33 %	115345714
4	NC_008389	CTT	2	6	1890	1895	0 %	66.67 %	0 %	33.33 %	115345715
5	NC_008389	GAT	2	6	1927	1932	33.33 %	33.33 %	33.33 %	0 %	115345715
6	NC_008389	TCT	2	6	2075	2080	0 %	66.67 %	0 %	33.33 %	115345715
7	NC_008389	GAA	2	6	2103	2108	66.67 %	0 %	33.33 %	0 %	115345715
8	NC_008389	ACC	2	6	2242	2247	33.33 %	0 %	0 %	66.67 %	115345715
9	NC_008389	TCG	2	6	2291	2296	0 %	33.33 %	33.33 %	33.33 %	115345715
10	NC_008389	AGG	2	6	2318	2323	33.33 %	0 %	66.67 %	0 %	115345715
11	NC_008389	GGC	2	6	2330	2335	0 %	0 %	66.67 %	33.33 %	115345715
12	NC_008389	GGT	2	6	2349	2354	0 %	33.33 %	66.67 %	0 %	115345715
13	NC_008389	GCG	2	6	2474	2479	0 %	0 %	66.67 %	33.33 %	115345715
14	NC_008389	AGA	2	6	2483	2488	66.67 %	0 %	33.33 %	0 %	115345715
15	NC_008389	GCA	2	6	2528	2533	33.33 %	0 %	33.33 %	33.33 %	115345715
16	NC_008389	ATC	2	6	2572	2577	33.33 %	33.33 %	0 %	33.33 %	115345715
17	NC_008389	GAT	2	6	2620	2625	33.33 %	33.33 %	33.33 %	0 %	115345715
18	NC_008389	ACA	2	6	2841	2846	66.67 %	0 %	0 %	33.33 %	115345715
19	NC_008389	CGA	2	6	3061	3066	33.33 %	0 %	33.33 %	33.33 %	115345716
20	NC_008389	TCT	2	6	3093	3098	0 %	66.67 %	0 %	33.33 %	115345716
21	NC_008389	GAT	2	6	3103	3108	33.33 %	33.33 %	33.33 %	0 %	115345716
22	NC_008389	GCG	2	6	3141	3146	0 %	0 %	66.67 %	33.33 %	115345716
23	NC_008389	GAC	2	6	3174	3179	33.33 %	0 %	33.33 %	33.33 %	115345716
24	NC_008389	CCG	2	6	3276	3281	0 %	0 %	33.33 %	66.67 %	115345716
25	NC_008389	TTC	2	6	3294	3299	0 %	66.67 %	0 %	33.33 %	115345716
26	NC_008389	TTG	2	6	3368	3373	0 %	66.67 %	33.33 %	0 %	115345716
27	NC_008389	CAC	2	6	3387	3392	33.33 %	0 %	0 %	66.67 %	115345716
28	NC_008389	AAG	2	6	4313	4318	66.67 %	0 %	33.33 %	0 %	115345717
29	NC_008389	CGG	2	6	4471	4476	0 %	0 %	66.67 %	33.33 %	115345717
30	NC_008389	GTC	2	6	4532	4537	0 %	33.33 %	33.33 %	33.33 %	115345717
31	NC_008389	TGC	2	6	4587	4592	0 %	33.33 %	33.33 %	33.33 %	115345717
32	NC_008389	GTT	2	6	4874	4879	0 %	66.67 %	33.33 %	0 %	115345718
33	NC_008389	TTG	2	6	4887	4892	0 %	66.67 %	33.33 %	0 %	115345718
34	NC_008389	AAC	2	6	5025	5030	66.67 %	0 %	0 %	33.33 %	115345718

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.