MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia afzelii PKo plasmid cp30

Total Repeats: 55

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008273	AAG	2	6	926	931	66.67 %	0 %	33.33 %	0 %	Non-Coding
2	NC_008273	TTC	2	6	932	937	0 %	66.67 %	0 %	33.33 %	Non-Coding
3	NC_008273	TCT	2	6	954	959	0 %	66.67 %	0 %	33.33 %	Non-Coding
4	NC_008273	CCT	2	6	2462	2467	0 %	33.33 %	0 %	66.67 %	Non-Coding
5	NC_008273	ATT	2	6	2503	2508	33.33 %	66.67 %	0 %	0 %	Non-Coding
6	NC_008273	AAT	2	6	2533	2538	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_008273	TTA	2	6	4394	4399	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_008273	AGT	2	6	4625	4630	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
9	NC_008273	TAT	2	6	4756	4761	33.33 %	66.67 %	0 %	0 %	Non-Coding
10	NC_008273	TCC	2	6	12817	12822	0 %	33.33 %	0 %	66.67 %	Non-Coding
11	NC_008273	CCT	2	6	13412	13417	0 %	33.33 %	0 %	66.67 %	Non-Coding
12	NC_008273	TTA	2	6	16720	16725	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_008273	CTT	2	6	18136	18141	0 %	66.67 %	0 %	33.33 %	Non-Coding
14	NC_008273	ATT	2	6	18665	18670	33.33 %	66.67 %	0 %	0 %	Non-Coding
15	NC_008273	ATA	2	6	18678	18683	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_008273	TAA	2	6	18692	18697	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_008273	TTA	2	6	18699	18704	33.33 %	66.67 %	0 %	0 %	Non-Coding
18	NC_008273	ATT	2	6	18719	18724	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_008273	CTG	2	6	18737	18742	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
20	NC_008273	TTA	3	9	18760	18768	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_008273	CAA	2	6	19533	19538	66.67 %	0 %	0 %	33.33 %	Non-Coding
22	NC_008273	TCT	2	6	19603	19608	0 %	66.67 %	0 %	33.33 %	Non-Coding
23	NC_008273	TAA	2	6	19620	19625	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_008273	ATT	2	6	19628	19633	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_008273	CCT	2	6	20174	20179	0 %	33.33 %	0 %	66.67 %	Non-Coding
26	NC_008273	TAT	2	6	20185	20190	33.33 %	66.67 %	0 %	0 %	Non-Coding
27	NC_008273	TTA	2	6	20234	20239	33.33 %	66.67 %	0 %	0 %	Non-Coding
28	NC_008273	ATT	2	6	20903	20908	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_008273	TAA	2	6	21515	21520	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_008273	TAA	2	6	23107	23112	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_008273	AAT	2	6	24644	24649	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_008273	CCA	2	6	24779	24784	33.33 %	0 %	0 %	66.67 %	Non-Coding
33	NC_008273	TAT	2	6	24838	24843	33.33 %	66.67 %	0 %	0 %	Non-Coding
34	NC_008273	CTA	2	6	24915	24920	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
35	NC_008273	CAA	2	6	25039	25044	66.67 %	0 %	0 %	33.33 %	Non-Coding
36	NC_008273	TCA	2	6	25184	25189	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
37	NC_008273	CCT	2	6	26335	26340	0 %	33.33 %	0 %	66.67 %	Non-Coding
38	NC_008273	TAA	3	9	28812	28820	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_008273	TTA	2	6	28871	28876	33.33 %	66.67 %	0 %	0 %	Non-Coding
40	NC_008273	ATT	2	6	28884	28889	33.33 %	66.67 %	0 %	0 %	Non-Coding
41	NC_008273	ATA	2	6	29028	29033	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_008273	AGG	2	6	29154	29159	33.33 %	0 %	66.67 %	0 %	Non-Coding
43	NC_008273	ATA	2	6	29202	29207	66.67 %	33.33 %	0 %	0 %	Non-Coding
44	NC_008273	TTA	2	6	29340	29345	33.33 %	66.67 %	0 %	0 %	Non-Coding
45	NC_008273	TGT	2	6	29416	29421	0 %	66.67 %	33.33 %	0 %	Non-Coding
46	NC_008273	AAT	2	6	29501	29506	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_008273	AAT	2	6	29639	29644	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_008273	CAA	2	6	29668	29673	66.67 %	0 %	0 %	33.33 %	Non-Coding
49	NC_008273	TAA	2	6	29748	29753	66.67 %	33.33 %	0 %	0 %	Non-Coding
50	NC_008273	AAC	2	6	29759	29764	66.67 %	0 %	0 %	33.33 %	Non-Coding
51	NC_008273	ATA	2	6	29874	29879	66.67 %	33.33 %	0 %	0 %	Non-Coding
52	NC_008273	ATT	2	6	29888	29893	33.33 %	66.67 %	0 %	0 %	Non-Coding
53	NC_008273	AAT	2	6	29927	29932	66.67 %	33.33 %	0 %	0 %	Non-Coding
54	NC_008273	TGA	2	6	29935	29940	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
55	NC_008273	TTA	2	6	29973	29978	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.