MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Rhodococcus jostii RHA1 plasmid pRHL2

Total Repeats: 25

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008270	CCCAGG	2	12	31897	31908	16.67 %	0 %	33.33 %	50 %	Non-Coding
2	NC_008270	TGGCCG	2	12	51726	51737	0 %	16.67 %	50 %	33.33 %	Non-Coding
3	NC_008270	TGACGT	2	12	106848	106859	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
4	NC_008270	CGAGGA	2	12	119454	119465	33.33 %	0 %	50 %	16.67 %	Non-Coding
5	NC_008270	CCGGGG	2	12	120737	120748	0 %	0 %	66.67 %	33.33 %	Non-Coding
6	NC_008270	CTGGTC	2	12	142166	142177	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7	NC_008270	TGGCTG	2	12	146854	146865	0 %	33.33 %	50 %	16.67 %	Non-Coding
8	NC_008270	GGCCAC	2	12	156232	156243	16.67 %	0 %	33.33 %	50 %	Non-Coding
9	NC_008270	TCGACC	2	12	163178	163189	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
10	NC_008270	TTCACT	2	12	163302	163313	16.67 %	50 %	0 %	33.33 %	Non-Coding
11	NC_008270	ACCGCC	2	12	182712	182723	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
12	NC_008270	ACGCCA	2	12	219539	219550	33.33 %	0 %	16.67 %	50 %	Non-Coding
13	NC_008270	GCGCCC	2	12	225039	225050	0 %	0 %	33.33 %	66.67 %	Non-Coding
14	NC_008270	CGCCGG	2	12	233104	233115	0 %	0 %	50 %	50 %	Non-Coding
15	NC_008270	CGCCCG	2	12	235088	235099	0 %	0 %	33.33 %	66.67 %	Non-Coding
16	NC_008270	TCAGGT	2	12	270870	270881	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
17	NC_008270	CCGCTC	2	12	307812	307823	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
18	NC_008270	AAGCCG	2	12	319026	319037	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19	NC_008270	CGGCTT	2	12	323808	323819	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
20	NC_008270	CGGTGT	2	12	337984	337995	0 %	33.33 %	50 %	16.67 %	Non-Coding
21	NC_008270	CGGCCG	2	12	366555	366566	0 %	0 %	50 %	50 %	Non-Coding
22	NC_008270	CGACCG	2	12	370133	370144	16.67 %	0 %	33.33 %	50 %	Non-Coding
23	NC_008270	CCTGGT	2	12	371881	371892	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
24	NC_008270	GAGGGC	2	12	414610	414621	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
25	NC_008270	GTCGAC	2	12	439111	439122	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.