MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Clostridium perfringens SM101 plasmid pSM101B

Total Repeats: 40

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008264	AAT	2	6	51	56	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_008264	CAA	2	6	65	70	66.67 %	0 %	0 %	33.33 %	Non-Coding
3	NC_008264	TTA	2	6	85	90	33.33 %	66.67 %	0 %	0 %	Non-Coding
4	NC_008264	AGA	2	6	111	116	66.67 %	0 %	33.33 %	0 %	Non-Coding
5	NC_008264	CTT	2	6	170	175	0 %	66.67 %	0 %	33.33 %	Non-Coding
6	NC_008264	AAT	2	6	232	237	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_008264	CTT	2	6	302	307	0 %	66.67 %	0 %	33.33 %	Non-Coding
8	NC_008264	TAA	2	6	482	487	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_008264	ATA	2	6	542	547	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_008264	ATA	2	6	3280	3285	66.67 %	33.33 %	0 %	0 %	Non-Coding
11	NC_008264	TAA	2	6	3693	3698	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_008264	TAA	2	6	5622	5627	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_008264	ATA	2	6	5630	5635	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_008264	TAT	2	6	6694	6699	33.33 %	66.67 %	0 %	0 %	Non-Coding
15	NC_008264	TAA	3	9	6820	6828	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_008264	AGA	2	6	7350	7355	66.67 %	0 %	33.33 %	0 %	Non-Coding
17	NC_008264	TCT	2	6	7418	7423	0 %	66.67 %	0 %	33.33 %	Non-Coding
18	NC_008264	AGA	2	6	7557	7562	66.67 %	0 %	33.33 %	0 %	Non-Coding
19	NC_008264	ATA	2	6	8585	8590	66.67 %	33.33 %	0 %	0 %	Non-Coding
20	NC_008264	TAA	2	6	8603	8608	66.67 %	33.33 %	0 %	0 %	Non-Coding
21	NC_008264	TCC	2	6	8635	8640	0 %	33.33 %	0 %	66.67 %	Non-Coding
22	NC_008264	ATA	2	6	8751	8756	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_008264	GCA	2	6	8767	8772	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
24	NC_008264	AAT	2	6	8920	8925	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_008264	ACT	2	6	8975	8980	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
26	NC_008264	TTA	2	6	9034	9039	33.33 %	66.67 %	0 %	0 %	Non-Coding
27	NC_008264	TAA	2	6	9215	9220	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_008264	AAT	2	6	9302	9307	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_008264	ATA	2	6	9312	9317	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_008264	AAT	2	6	9922	9927	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_008264	TAA	2	6	9959	9964	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_008264	ATA	2	6	10147	10152	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_008264	TAA	2	6	10222	10227	66.67 %	33.33 %	0 %	0 %	Non-Coding
34	NC_008264	ATA	2	6	10381	10386	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_008264	CTT	2	6	11740	11745	0 %	66.67 %	0 %	33.33 %	Non-Coding
36	NC_008264	TAA	2	6	11761	11766	66.67 %	33.33 %	0 %	0 %	Non-Coding
37	NC_008264	TAT	2	6	11851	11856	33.33 %	66.67 %	0 %	0 %	Non-Coding
38	NC_008264	TTA	2	6	11967	11972	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_008264	TTC	2	6	11978	11983	0 %	66.67 %	0 %	33.33 %	Non-Coding
40	NC_008264	CTA	2	6	12183	12188	33.33 %	33.33 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.