Penta-nucleotide Repeats of Yersinia pestis Nepal516 plasmid pMT
Total Repeats: 64
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008118 | GTTCG | 2 | 10 | 426 | 435 | 0 % | 40 % | 40 % | 20 % | 108793733 |
2 | NC_008118 | AAGGT | 2 | 10 | 775 | 784 | 40 % | 20 % | 40 % | 0 % | 108793733 |
3 | NC_008118 | AGCGC | 2 | 10 | 1175 | 1184 | 20 % | 0 % | 40 % | 40 % | 108793734 |
4 | NC_008118 | TCAAA | 2 | 10 | 1813 | 1822 | 60 % | 20 % | 0 % | 20 % | 108793734 |
5 | NC_008118 | CAGAG | 2 | 10 | 7499 | 7508 | 40 % | 0 % | 40 % | 20 % | 108793738 |
6 | NC_008118 | TTGTC | 2 | 10 | 7897 | 7906 | 0 % | 60 % | 20 % | 20 % | 108793738 |
7 | NC_008118 | TGCGC | 2 | 10 | 13799 | 13808 | 0 % | 20 % | 40 % | 40 % | 108793743 |
8 | NC_008118 | GGATG | 2 | 10 | 18771 | 18780 | 20 % | 20 % | 60 % | 0 % | 108793745 |
9 | NC_008118 | ACCAG | 2 | 10 | 19128 | 19137 | 40 % | 0 % | 20 % | 40 % | 108793746 |
10 | NC_008118 | TGAAC | 2 | 10 | 19339 | 19348 | 40 % | 20 % | 20 % | 20 % | 108793746 |
11 | NC_008118 | CGGTA | 2 | 10 | 21232 | 21241 | 20 % | 20 % | 40 % | 20 % | 108793750 |
12 | NC_008118 | CGACA | 2 | 10 | 21800 | 21809 | 40 % | 0 % | 20 % | 40 % | 108793750 |
13 | NC_008118 | CGGCA | 2 | 10 | 22977 | 22986 | 20 % | 0 % | 40 % | 40 % | 108793828 |
14 | NC_008118 | AGTGC | 2 | 10 | 27453 | 27462 | 20 % | 20 % | 40 % | 20 % | 108793757 |
15 | NC_008118 | CTTCG | 2 | 10 | 28386 | 28395 | 0 % | 40 % | 20 % | 40 % | 108793758 |
16 | NC_008118 | CGGAA | 2 | 10 | 29270 | 29279 | 40 % | 0 % | 40 % | 20 % | 108793760 |
17 | NC_008118 | AACGG | 2 | 10 | 29478 | 29487 | 40 % | 0 % | 40 % | 20 % | 108793760 |
18 | NC_008118 | TGCCC | 2 | 10 | 34651 | 34660 | 0 % | 20 % | 20 % | 60 % | 108793768 |
19 | NC_008118 | AAATT | 2 | 10 | 35791 | 35800 | 60 % | 40 % | 0 % | 0 % | 108793769 |
20 | NC_008118 | ATTTT | 2 | 10 | 36023 | 36032 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
21 | NC_008118 | TGTCG | 2 | 10 | 36494 | 36503 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
22 | NC_008118 | CCCCT | 2 | 10 | 36903 | 36912 | 0 % | 20 % | 0 % | 80 % | Non-Coding |
23 | NC_008118 | TCCCC | 2 | 10 | 37051 | 37060 | 0 % | 20 % | 0 % | 80 % | 108793770 |
24 | NC_008118 | GACTG | 2 | 10 | 39055 | 39064 | 20 % | 20 % | 40 % | 20 % | 108793773 |
25 | NC_008118 | CATTG | 2 | 10 | 39743 | 39752 | 20 % | 40 % | 20 % | 20 % | 108793827 |
26 | NC_008118 | CGTCA | 2 | 10 | 43477 | 43486 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
27 | NC_008118 | ACGTA | 2 | 10 | 45545 | 45554 | 40 % | 20 % | 20 % | 20 % | 108793777 |
28 | NC_008118 | ACTTA | 2 | 10 | 47214 | 47223 | 40 % | 40 % | 0 % | 20 % | 108793778 |
29 | NC_008118 | CAGCG | 2 | 10 | 49601 | 49610 | 20 % | 0 % | 40 % | 40 % | 108793781 |
30 | NC_008118 | CCATT | 2 | 10 | 50203 | 50212 | 20 % | 40 % | 0 % | 40 % | 108793783 |
31 | NC_008118 | GGGGT | 2 | 10 | 55283 | 55292 | 0 % | 20 % | 80 % | 0 % | Non-Coding |
32 | NC_008118 | GCTGC | 2 | 10 | 55524 | 55533 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
33 | NC_008118 | GCGAT | 2 | 10 | 55832 | 55841 | 20 % | 20 % | 40 % | 20 % | 108793789 |
34 | NC_008118 | CGCAG | 2 | 10 | 58923 | 58932 | 20 % | 0 % | 40 % | 40 % | 108793791 |
35 | NC_008118 | GAAGA | 2 | 10 | 61165 | 61174 | 60 % | 0 % | 40 % | 0 % | 108793792 |
36 | NC_008118 | TGAAC | 2 | 10 | 62509 | 62518 | 40 % | 20 % | 20 % | 20 % | 108793793 |
37 | NC_008118 | ATCAG | 2 | 10 | 65115 | 65124 | 40 % | 20 % | 20 % | 20 % | 108793796 |
38 | NC_008118 | AATTG | 2 | 10 | 68642 | 68651 | 40 % | 40 % | 20 % | 0 % | 108793797 |
39 | NC_008118 | TAAAA | 2 | 10 | 69719 | 69728 | 80 % | 20 % | 0 % | 0 % | 108793797 |
40 | NC_008118 | GGAAT | 2 | 10 | 72383 | 72392 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
41 | NC_008118 | CGCTT | 2 | 10 | 72737 | 72746 | 0 % | 40 % | 20 % | 40 % | 108793799 |
42 | NC_008118 | GGTTT | 2 | 10 | 74344 | 74353 | 0 % | 60 % | 40 % | 0 % | 108793801 |
43 | NC_008118 | TTTGA | 2 | 10 | 74657 | 74666 | 20 % | 60 % | 20 % | 0 % | 108793802 |
44 | NC_008118 | GCGCT | 2 | 10 | 75295 | 75304 | 0 % | 20 % | 40 % | 40 % | 108793802 |
45 | NC_008118 | ACCTT | 2 | 10 | 75695 | 75704 | 20 % | 40 % | 0 % | 40 % | 108793803 |
46 | NC_008118 | CGAAC | 2 | 10 | 76044 | 76053 | 40 % | 0 % | 20 % | 40 % | 108793803 |
47 | NC_008118 | CGAAT | 2 | 10 | 76618 | 76627 | 40 % | 20 % | 20 % | 20 % | 108793804 |
48 | NC_008118 | TGCTC | 2 | 10 | 76654 | 76663 | 0 % | 40 % | 20 % | 40 % | 108793804 |
49 | NC_008118 | CGCAG | 2 | 10 | 77085 | 77094 | 20 % | 0 % | 40 % | 40 % | 108793805 |
50 | NC_008118 | ACAGC | 2 | 10 | 77202 | 77211 | 40 % | 0 % | 20 % | 40 % | 108793805 |
51 | NC_008118 | GGTGC | 2 | 10 | 78004 | 78013 | 0 % | 20 % | 60 % | 20 % | 108793806 |
52 | NC_008118 | AACAA | 2 | 10 | 83383 | 83392 | 80 % | 0 % | 0 % | 20 % | 108793810 |
53 | NC_008118 | GGTAA | 2 | 10 | 86391 | 86400 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
54 | NC_008118 | CCGTT | 2 | 10 | 86952 | 86961 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
55 | NC_008118 | AAAGA | 2 | 10 | 90063 | 90072 | 80 % | 0 % | 20 % | 0 % | 108793817 |
56 | NC_008118 | CGCTT | 2 | 10 | 92742 | 92751 | 0 % | 40 % | 20 % | 40 % | 108793819 |
57 | NC_008118 | TGATT | 2 | 10 | 93156 | 93165 | 20 % | 60 % | 20 % | 0 % | 108793819 |
58 | NC_008118 | CTGCG | 2 | 10 | 94687 | 94696 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
59 | NC_008118 | GGAAT | 2 | 10 | 95810 | 95819 | 40 % | 20 % | 40 % | 0 % | 108793822 |
60 | NC_008118 | CTCTA | 2 | 10 | 97086 | 97095 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
61 | NC_008118 | TGTCG | 2 | 10 | 97291 | 97300 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
62 | NC_008118 | CTGTC | 2 | 10 | 98101 | 98110 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
63 | NC_008118 | CCTCG | 2 | 10 | 99246 | 99255 | 0 % | 20 % | 20 % | 60 % | 108793826 |
64 | NC_008118 | ACGGC | 2 | 10 | 99683 | 99692 | 20 % | 0 % | 40 % | 40 % | 108793826 |