MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Helicobacter pylori HPAG1 plasmid pHPAG1

Total Repeats: 36

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008087	CTT	2	6	29	34	0 %	66.67 %	0 %	33.33 %	Non-Coding
2	NC_008087	CTT	2	6	51	56	0 %	66.67 %	0 %	33.33 %	Non-Coding
3	NC_008087	CTT	2	6	73	78	0 %	66.67 %	0 %	33.33 %	Non-Coding
4	NC_008087	ATT	2	6	116	121	33.33 %	66.67 %	0 %	0 %	Non-Coding
5	NC_008087	AAC	2	6	141	146	66.67 %	0 %	0 %	33.33 %	Non-Coding
6	NC_008087	AGG	2	6	250	255	33.33 %	0 %	66.67 %	0 %	Non-Coding
7	NC_008087	TAG	2	6	278	283	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8	NC_008087	TAA	2	6	335	340	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_008087	CTT	2	6	361	366	0 %	66.67 %	0 %	33.33 %	Non-Coding
10	NC_008087	TTA	2	6	383	388	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_008087	CAA	2	6	3095	3100	66.67 %	0 %	0 %	33.33 %	Non-Coding
12	NC_008087	GTT	2	6	3263	3268	0 %	66.67 %	33.33 %	0 %	Non-Coding
13	NC_008087	TTA	2	6	3270	3275	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_008087	AAC	2	6	3284	3289	66.67 %	0 %	0 %	33.33 %	Non-Coding
15	NC_008087	TGT	2	6	3292	3297	0 %	66.67 %	33.33 %	0 %	Non-Coding
16	NC_008087	ACC	2	6	3347	3352	33.33 %	0 %	0 %	66.67 %	Non-Coding
17	NC_008087	CTT	2	6	3408	3413	0 %	66.67 %	0 %	33.33 %	Non-Coding
18	NC_008087	CTT	2	6	3430	3435	0 %	66.67 %	0 %	33.33 %	Non-Coding
19	NC_008087	CTT	2	6	3452	3457	0 %	66.67 %	0 %	33.33 %	Non-Coding
20	NC_008087	CTT	2	6	3474	3479	0 %	66.67 %	0 %	33.33 %	Non-Coding
21	NC_008087	GGA	2	6	3631	3636	33.33 %	0 %	66.67 %	0 %	Non-Coding
22	NC_008087	AGG	2	6	3658	3663	33.33 %	0 %	66.67 %	0 %	Non-Coding
23	NC_008087	TAT	2	6	3680	3685	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_008087	TTA	2	6	3735	3740	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_008087	TAT	2	6	3802	3807	33.33 %	66.67 %	0 %	0 %	Non-Coding
26	NC_008087	TAT	2	6	7871	7876	33.33 %	66.67 %	0 %	0 %	Non-Coding
27	NC_008087	TTG	2	6	8620	8625	0 %	66.67 %	33.33 %	0 %	Non-Coding
28	NC_008087	GTT	2	6	8683	8688	0 %	66.67 %	33.33 %	0 %	Non-Coding
29	NC_008087	TTC	2	6	8699	8704	0 %	66.67 %	0 %	33.33 %	Non-Coding
30	NC_008087	ATC	2	6	8747	8752	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
31	NC_008087	CAA	2	6	9084	9089	66.67 %	0 %	0 %	33.33 %	Non-Coding
32	NC_008087	GTT	2	6	9252	9257	0 %	66.67 %	33.33 %	0 %	Non-Coding
33	NC_008087	TTA	2	6	9259	9264	33.33 %	66.67 %	0 %	0 %	Non-Coding
34	NC_008087	AAC	2	6	9273	9278	66.67 %	0 %	0 %	33.33 %	Non-Coding
35	NC_008087	TGT	2	6	9281	9286	0 %	66.67 %	33.33 %	0 %	Non-Coding
36	NC_008087	ACC	2	6	9336	9341	33.33 %	0 %	0 %	66.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.