MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Ruegeria sp. TM1040 mega plasmid

Total Repeats: 20

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008043	AACATG	2	12	63809	63820	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
2	NC_008043	GCGAGC	2	12	93741	93752	16.67 %	0 %	50 %	33.33 %	Non-Coding
3	NC_008043	GGGCCG	2	12	144644	144655	0 %	0 %	66.67 %	33.33 %	Non-Coding
4	NC_008043	CAAAGG	2	12	161009	161020	50 %	0 %	33.33 %	16.67 %	Non-Coding
5	NC_008043	TCGGCT	2	12	175190	175201	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6	NC_008043	TATAAG	2	12	189871	189882	50 %	33.33 %	16.67 %	0 %	Non-Coding
7	NC_008043	ACTGAA	2	12	240528	240539	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
8	NC_008043	CGACCC	2	12	301640	301651	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
9	NC_008043	CTGCCG	2	12	302925	302936	0 %	16.67 %	33.33 %	50 %	Non-Coding
10	NC_008043	TTCGCC	2	12	336300	336311	0 %	33.33 %	16.67 %	50 %	Non-Coding
11	NC_008043	GTGGCC	2	12	477022	477033	0 %	16.67 %	50 %	33.33 %	Non-Coding
12	NC_008043	TGGTGT	2	12	505466	505477	0 %	50 %	50 %	0 %	Non-Coding
13	NC_008043	AGCCGA	2	12	509535	509546	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
14	NC_008043	TGCAGG	2	12	586194	586205	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
15	NC_008043	ACCTGC	2	12	597439	597450	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
16	NC_008043	AGCCGA	2	12	625787	625798	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17	NC_008043	AACGGC	2	12	628039	628050	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
18	NC_008043	TACGTA	2	12	634027	634038	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
19	NC_008043	ACAAAT	2	12	664708	664719	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
20	NC_008043	TGAACC	2	12	793060	793071	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.