Hexa-nucleotide Coding Repeats of Lawsonia intracellularis PHE/MN1-00 plasmid 3
Total Repeats: 88
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008014 | GGCCAT | 2 | 12 | 12450 | 12461 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 94972407 |
2 | NC_008014 | AAAAAG | 2 | 12 | 24620 | 24631 | 83.33 % | 0 % | 16.67 % | 0 % | 94972417 |
3 | NC_008014 | AGGGAA | 2 | 12 | 26351 | 26362 | 50 % | 0 % | 50 % | 0 % | 94972417 |
4 | NC_008014 | AAATGA | 2 | 12 | 27336 | 27347 | 66.67 % | 16.67 % | 16.67 % | 0 % | 94972418 |
5 | NC_008014 | AATCAA | 2 | 12 | 31329 | 31340 | 66.67 % | 16.67 % | 0 % | 16.67 % | 94972422 |
6 | NC_008014 | TTTATT | 2 | 12 | 36192 | 36203 | 16.67 % | 83.33 % | 0 % | 0 % | 94972426 |
7 | NC_008014 | TTCTGC | 2 | 12 | 45083 | 45094 | 0 % | 50 % | 16.67 % | 33.33 % | 94972433 |
8 | NC_008014 | ATAGTA | 2 | 12 | 48413 | 48424 | 50 % | 33.33 % | 16.67 % | 0 % | 94972435 |
9 | NC_008014 | GTAAAC | 2 | 12 | 49676 | 49687 | 50 % | 16.67 % | 16.67 % | 16.67 % | 94972435 |
10 | NC_008014 | TGCTAT | 2 | 12 | 52541 | 52552 | 16.67 % | 50 % | 16.67 % | 16.67 % | 94972436 |
11 | NC_008014 | ATTCCT | 2 | 12 | 56257 | 56268 | 16.67 % | 50 % | 0 % | 33.33 % | 94972438 |
12 | NC_008014 | CTTGTT | 2 | 12 | 57407 | 57418 | 0 % | 66.67 % | 16.67 % | 16.67 % | 94972438 |
13 | NC_008014 | GAACCT | 2 | 12 | 61659 | 61670 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 94972439 |
14 | NC_008014 | AAAGAC | 2 | 12 | 63320 | 63331 | 66.67 % | 0 % | 16.67 % | 16.67 % | 94972440 |
15 | NC_008014 | TGAAGC | 2 | 12 | 66307 | 66318 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 94972441 |
16 | NC_008014 | ATAAAA | 2 | 12 | 67098 | 67109 | 83.33 % | 16.67 % | 0 % | 0 % | 94972441 |
17 | NC_008014 | TGAAGG | 2 | 12 | 71700 | 71711 | 33.33 % | 16.67 % | 50 % | 0 % | 94972444 |
18 | NC_008014 | GTATAG | 2 | 12 | 71915 | 71926 | 33.33 % | 33.33 % | 33.33 % | 0 % | 94972444 |
19 | NC_008014 | ATTTTT | 2 | 12 | 72009 | 72020 | 16.67 % | 83.33 % | 0 % | 0 % | 94972444 |
20 | NC_008014 | CCTCTT | 2 | 12 | 75070 | 75081 | 0 % | 50 % | 0 % | 50 % | 94972445 |
21 | NC_008014 | TGAAGA | 2 | 12 | 75695 | 75706 | 50 % | 16.67 % | 33.33 % | 0 % | 94972445 |
22 | NC_008014 | ATAGCA | 2 | 12 | 75753 | 75764 | 50 % | 16.67 % | 16.67 % | 16.67 % | 94972445 |
23 | NC_008014 | AGAAAA | 2 | 12 | 82338 | 82349 | 83.33 % | 0 % | 16.67 % | 0 % | 94972448 |
24 | NC_008014 | CCTCTT | 3 | 18 | 82925 | 82942 | 0 % | 50 % | 0 % | 50 % | 94972448 |
25 | NC_008014 | CTTCAT | 2 | 12 | 85562 | 85573 | 16.67 % | 50 % | 0 % | 33.33 % | 94972449 |
26 | NC_008014 | TGTCTT | 2 | 12 | 92282 | 92293 | 0 % | 66.67 % | 16.67 % | 16.67 % | 94972452 |
27 | NC_008014 | TAAAAA | 2 | 12 | 93445 | 93456 | 83.33 % | 16.67 % | 0 % | 0 % | 94972452 |
28 | NC_008014 | TTTCAT | 2 | 12 | 95208 | 95219 | 16.67 % | 66.67 % | 0 % | 16.67 % | 94972453 |
29 | NC_008014 | GAACTA | 2 | 12 | 97662 | 97673 | 50 % | 16.67 % | 16.67 % | 16.67 % | 94972454 |
30 | NC_008014 | CTTTTT | 2 | 12 | 100375 | 100386 | 0 % | 83.33 % | 0 % | 16.67 % | 94972455 |
31 | NC_008014 | TAAAAT | 2 | 12 | 101315 | 101326 | 66.67 % | 33.33 % | 0 % | 0 % | 94972455 |
32 | NC_008014 | ACCACA | 2 | 12 | 109463 | 109474 | 50 % | 0 % | 0 % | 50 % | 94972458 |
33 | NC_008014 | CTTCAT | 2 | 12 | 110990 | 111001 | 16.67 % | 50 % | 0 % | 33.33 % | 94972459 |
34 | NC_008014 | ACCTGC | 2 | 12 | 119458 | 119469 | 16.67 % | 16.67 % | 16.67 % | 50 % | 94972463 |
35 | NC_008014 | TACCAT | 2 | 12 | 120711 | 120722 | 33.33 % | 33.33 % | 0 % | 33.33 % | 94972463 |
36 | NC_008014 | GTAATA | 2 | 12 | 120771 | 120782 | 50 % | 33.33 % | 16.67 % | 0 % | 94972463 |
37 | NC_008014 | AATATA | 2 | 12 | 122347 | 122358 | 66.67 % | 33.33 % | 0 % | 0 % | 94972464 |
38 | NC_008014 | CTTGGT | 2 | 12 | 123920 | 123931 | 0 % | 50 % | 33.33 % | 16.67 % | 94972465 |
39 | NC_008014 | TTTGGT | 2 | 12 | 125476 | 125487 | 0 % | 66.67 % | 33.33 % | 0 % | 94972468 |
40 | NC_008014 | AAATAC | 2 | 12 | 128639 | 128650 | 66.67 % | 16.67 % | 0 % | 16.67 % | 94972471 |
41 | NC_008014 | TCTCAA | 2 | 12 | 131151 | 131162 | 33.33 % | 33.33 % | 0 % | 33.33 % | 94972473 |
42 | NC_008014 | CTTCAA | 2 | 12 | 133382 | 133393 | 33.33 % | 33.33 % | 0 % | 33.33 % | 94972476 |
43 | NC_008014 | TGATAT | 2 | 12 | 134483 | 134494 | 33.33 % | 50 % | 16.67 % | 0 % | 94972477 |
44 | NC_008014 | TAAAAA | 2 | 12 | 135715 | 135726 | 83.33 % | 16.67 % | 0 % | 0 % | 94972478 |
45 | NC_008014 | AAGGTT | 2 | 12 | 141174 | 141185 | 33.33 % | 33.33 % | 33.33 % | 0 % | 94972483 |
46 | NC_008014 | TGGGAT | 2 | 12 | 141423 | 141434 | 16.67 % | 33.33 % | 50 % | 0 % | 94972483 |
47 | NC_008014 | TATGTA | 2 | 12 | 148474 | 148485 | 33.33 % | 50 % | 16.67 % | 0 % | 94972489 |
48 | NC_008014 | TATTCC | 2 | 12 | 148802 | 148813 | 16.67 % | 50 % | 0 % | 33.33 % | 94972489 |
49 | NC_008014 | AGAAAA | 2 | 12 | 149026 | 149037 | 83.33 % | 0 % | 16.67 % | 0 % | 94972489 |
50 | NC_008014 | GAAAAA | 2 | 12 | 149256 | 149267 | 83.33 % | 0 % | 16.67 % | 0 % | 94972489 |
51 | NC_008014 | GAAAAA | 2 | 12 | 150999 | 151010 | 83.33 % | 0 % | 16.67 % | 0 % | 94972489 |
52 | NC_008014 | AAAAAT | 2 | 12 | 154050 | 154061 | 83.33 % | 16.67 % | 0 % | 0 % | 94972489 |
53 | NC_008014 | AAAAAG | 2 | 12 | 154896 | 154907 | 83.33 % | 0 % | 16.67 % | 0 % | 94972489 |
54 | NC_008014 | GAAAAA | 2 | 12 | 156014 | 156025 | 83.33 % | 0 % | 16.67 % | 0 % | 94972489 |
55 | NC_008014 | AAAAGA | 2 | 12 | 157463 | 157474 | 83.33 % | 0 % | 16.67 % | 0 % | 94972489 |
56 | NC_008014 | AATCCA | 2 | 12 | 157632 | 157643 | 50 % | 16.67 % | 0 % | 33.33 % | 94972489 |
57 | NC_008014 | TGAAGA | 2 | 12 | 157706 | 157717 | 50 % | 16.67 % | 33.33 % | 0 % | 94972489 |
58 | NC_008014 | CTAGAA | 2 | 12 | 159027 | 159038 | 50 % | 16.67 % | 16.67 % | 16.67 % | 94972489 |
59 | NC_008014 | GAACAA | 2 | 12 | 159597 | 159608 | 66.67 % | 0 % | 16.67 % | 16.67 % | 94972489 |
60 | NC_008014 | AGATGA | 2 | 12 | 160256 | 160267 | 50 % | 16.67 % | 33.33 % | 0 % | 94972489 |
61 | NC_008014 | GAAAAA | 2 | 12 | 161787 | 161798 | 83.33 % | 0 % | 16.67 % | 0 % | 94972489 |
62 | NC_008014 | AAGAAA | 2 | 12 | 162702 | 162713 | 83.33 % | 0 % | 16.67 % | 0 % | 94972489 |
63 | NC_008014 | AAGAAA | 2 | 12 | 162745 | 162756 | 83.33 % | 0 % | 16.67 % | 0 % | 94972489 |
64 | NC_008014 | ACAAGC | 2 | 12 | 162908 | 162919 | 50 % | 0 % | 16.67 % | 33.33 % | 94972489 |
65 | NC_008014 | CAAGAA | 2 | 12 | 162972 | 162983 | 66.67 % | 0 % | 16.67 % | 16.67 % | 94972489 |
66 | NC_008014 | AAGAAA | 2 | 12 | 163968 | 163979 | 83.33 % | 0 % | 16.67 % | 0 % | 94972489 |
67 | NC_008014 | AAGAAA | 2 | 12 | 164011 | 164022 | 83.33 % | 0 % | 16.67 % | 0 % | 94972489 |
68 | NC_008014 | ACAAGC | 2 | 12 | 164174 | 164185 | 50 % | 0 % | 16.67 % | 33.33 % | 94972489 |
69 | NC_008014 | CAAGAA | 2 | 12 | 164238 | 164249 | 66.67 % | 0 % | 16.67 % | 16.67 % | 94972489 |
70 | NC_008014 | GAAGGA | 2 | 12 | 165111 | 165122 | 50 % | 0 % | 50 % | 0 % | 94972489 |
71 | NC_008014 | AGAAAA | 2 | 12 | 165959 | 165970 | 83.33 % | 0 % | 16.67 % | 0 % | 94972489 |
72 | NC_008014 | AAAAAG | 2 | 12 | 167415 | 167426 | 83.33 % | 0 % | 16.67 % | 0 % | 94972489 |
73 | NC_008014 | ATAAAC | 2 | 12 | 168082 | 168093 | 66.67 % | 16.67 % | 0 % | 16.67 % | 94972489 |
74 | NC_008014 | AGATGA | 2 | 12 | 169805 | 169816 | 50 % | 16.67 % | 33.33 % | 0 % | 94972489 |
75 | NC_008014 | TAGTGA | 2 | 12 | 170423 | 170434 | 33.33 % | 33.33 % | 33.33 % | 0 % | 94972489 |
76 | NC_008014 | AGAAAA | 2 | 12 | 170536 | 170547 | 83.33 % | 0 % | 16.67 % | 0 % | 94972489 |
77 | NC_008014 | GAGGAA | 2 | 12 | 171504 | 171515 | 50 % | 0 % | 50 % | 0 % | 94972489 |
78 | NC_008014 | CAGAAG | 2 | 12 | 172231 | 172242 | 50 % | 0 % | 33.33 % | 16.67 % | 94972489 |
79 | NC_008014 | AGTACT | 2 | 12 | 172368 | 172379 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 94972489 |
80 | NC_008014 | CCTGAT | 2 | 12 | 172938 | 172949 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 94972489 |
81 | NC_008014 | TATCAA | 2 | 12 | 177336 | 177347 | 50 % | 33.33 % | 0 % | 16.67 % | 94972491 |
82 | NC_008014 | TATTTT | 2 | 12 | 181733 | 181744 | 16.67 % | 83.33 % | 0 % | 0 % | 94972495 |
83 | NC_008014 | TGTTTG | 2 | 12 | 182481 | 182492 | 0 % | 66.67 % | 33.33 % | 0 % | 94972496 |
84 | NC_008014 | ATATTT | 2 | 12 | 182734 | 182745 | 33.33 % | 66.67 % | 0 % | 0 % | 94972496 |
85 | NC_008014 | ATAGAT | 2 | 12 | 182872 | 182883 | 50 % | 33.33 % | 16.67 % | 0 % | 94972496 |
86 | NC_008014 | TTTTTG | 2 | 12 | 183215 | 183226 | 0 % | 83.33 % | 16.67 % | 0 % | 94972496 |
87 | NC_008014 | ATTAAG | 2 | 12 | 185089 | 185100 | 50 % | 33.33 % | 16.67 % | 0 % | 94972497 |
88 | NC_008014 | AATCTA | 2 | 12 | 191634 | 191645 | 50 % | 33.33 % | 0 % | 16.67 % | 94972501 |