Tetra-nucleotide Coding Repeats of Lawsonia intracellularis PHE/MN1-00 plasmid 2
Total Repeats: 66
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008013 | GATG | 2 | 8 | 2368 | 2375 | 25 % | 25 % | 50 % | 0 % | 94972375 |
2 | NC_008013 | AAGA | 2 | 8 | 3463 | 3470 | 75 % | 0 % | 25 % | 0 % | 94972376 |
3 | NC_008013 | CTTT | 2 | 8 | 3491 | 3498 | 0 % | 75 % | 0 % | 25 % | 94972376 |
4 | NC_008013 | TGAT | 2 | 8 | 3530 | 3537 | 25 % | 50 % | 25 % | 0 % | 94972376 |
5 | NC_008013 | ACCA | 2 | 8 | 3668 | 3675 | 50 % | 0 % | 0 % | 50 % | 94972376 |
6 | NC_008013 | TGTA | 2 | 8 | 5063 | 5070 | 25 % | 50 % | 25 % | 0 % | 94972377 |
7 | NC_008013 | TGTT | 2 | 8 | 5406 | 5413 | 0 % | 75 % | 25 % | 0 % | 94972377 |
8 | NC_008013 | TCCA | 2 | 8 | 5468 | 5475 | 25 % | 25 % | 0 % | 50 % | 94972377 |
9 | NC_008013 | GTTT | 2 | 8 | 6040 | 6047 | 0 % | 75 % | 25 % | 0 % | 94972377 |
10 | NC_008013 | GGTT | 2 | 8 | 6199 | 6206 | 0 % | 50 % | 50 % | 0 % | 94972377 |
11 | NC_008013 | TGAC | 2 | 8 | 6940 | 6947 | 25 % | 25 % | 25 % | 25 % | 94972377 |
12 | NC_008013 | AATT | 2 | 8 | 7055 | 7062 | 50 % | 50 % | 0 % | 0 % | 94972377 |
13 | NC_008013 | GTTT | 2 | 8 | 7724 | 7731 | 0 % | 75 % | 25 % | 0 % | 94972377 |
14 | NC_008013 | AAGT | 2 | 8 | 9057 | 9064 | 50 % | 25 % | 25 % | 0 % | 94972378 |
15 | NC_008013 | TTCA | 2 | 8 | 9123 | 9130 | 25 % | 50 % | 0 % | 25 % | 94972378 |
16 | NC_008013 | CTGT | 2 | 8 | 9314 | 9321 | 0 % | 50 % | 25 % | 25 % | 94972378 |
17 | NC_008013 | TAGT | 2 | 8 | 10599 | 10606 | 25 % | 50 % | 25 % | 0 % | 94972379 |
18 | NC_008013 | AAAT | 2 | 8 | 12457 | 12464 | 75 % | 25 % | 0 % | 0 % | 94972379 |
19 | NC_008013 | TTCC | 2 | 8 | 12843 | 12850 | 0 % | 50 % | 0 % | 50 % | 94972380 |
20 | NC_008013 | AAAT | 2 | 8 | 12919 | 12926 | 75 % | 25 % | 0 % | 0 % | 94972380 |
21 | NC_008013 | AATA | 2 | 8 | 13436 | 13443 | 75 % | 25 % | 0 % | 0 % | 94972380 |
22 | NC_008013 | ATAA | 2 | 8 | 13857 | 13864 | 75 % | 25 % | 0 % | 0 % | 94972380 |
23 | NC_008013 | AAGT | 2 | 8 | 13998 | 14005 | 50 % | 25 % | 25 % | 0 % | 94972380 |
24 | NC_008013 | TAAA | 2 | 8 | 14178 | 14185 | 75 % | 25 % | 0 % | 0 % | 94972380 |
25 | NC_008013 | ATGT | 2 | 8 | 14370 | 14377 | 25 % | 50 % | 25 % | 0 % | 94972380 |
26 | NC_008013 | CATC | 2 | 8 | 14528 | 14535 | 25 % | 25 % | 0 % | 50 % | 94972380 |
27 | NC_008013 | AGAA | 2 | 8 | 15504 | 15511 | 75 % | 0 % | 25 % | 0 % | 94972382 |
28 | NC_008013 | CATT | 2 | 8 | 16604 | 16611 | 25 % | 50 % | 0 % | 25 % | 94972383 |
29 | NC_008013 | GTTG | 2 | 8 | 17925 | 17932 | 0 % | 50 % | 50 % | 0 % | 94972384 |
30 | NC_008013 | GAAA | 2 | 8 | 18343 | 18350 | 75 % | 0 % | 25 % | 0 % | 94972384 |
31 | NC_008013 | TTAT | 2 | 8 | 18584 | 18591 | 25 % | 75 % | 0 % | 0 % | 94972385 |
32 | NC_008013 | AGAT | 2 | 8 | 19143 | 19150 | 50 % | 25 % | 25 % | 0 % | 94972385 |
33 | NC_008013 | GATT | 2 | 8 | 19846 | 19853 | 25 % | 50 % | 25 % | 0 % | 94972386 |
34 | NC_008013 | CAGG | 2 | 8 | 19896 | 19903 | 25 % | 0 % | 50 % | 25 % | 94972386 |
35 | NC_008013 | CATT | 2 | 8 | 20289 | 20296 | 25 % | 50 % | 0 % | 25 % | 94972386 |
36 | NC_008013 | GACT | 2 | 8 | 20867 | 20874 | 25 % | 25 % | 25 % | 25 % | 94972387 |
37 | NC_008013 | AAAT | 2 | 8 | 21022 | 21029 | 75 % | 25 % | 0 % | 0 % | 94972387 |
38 | NC_008013 | TTAT | 2 | 8 | 21262 | 21269 | 25 % | 75 % | 0 % | 0 % | 94972387 |
39 | NC_008013 | TTCC | 2 | 8 | 21529 | 21536 | 0 % | 50 % | 0 % | 50 % | 94972387 |
40 | NC_008013 | ATTA | 2 | 8 | 22178 | 22185 | 50 % | 50 % | 0 % | 0 % | 94972388 |
41 | NC_008013 | CTTA | 2 | 8 | 22236 | 22243 | 25 % | 50 % | 0 % | 25 % | 94972388 |
42 | NC_008013 | TTAG | 2 | 8 | 22248 | 22255 | 25 % | 50 % | 25 % | 0 % | 94972388 |
43 | NC_008013 | GGCT | 2 | 8 | 22376 | 22383 | 0 % | 25 % | 50 % | 25 % | 94972388 |
44 | NC_008013 | TTTG | 2 | 8 | 22800 | 22807 | 0 % | 75 % | 25 % | 0 % | 94972389 |
45 | NC_008013 | ACTA | 2 | 8 | 23564 | 23571 | 50 % | 25 % | 0 % | 25 % | 94972389 |
46 | NC_008013 | CTTA | 2 | 8 | 23639 | 23646 | 25 % | 50 % | 0 % | 25 % | 94972390 |
47 | NC_008013 | AGAA | 2 | 8 | 24170 | 24177 | 75 % | 0 % | 25 % | 0 % | 94972390 |
48 | NC_008013 | TGGA | 2 | 8 | 24225 | 24232 | 25 % | 25 % | 50 % | 0 % | 94972390 |
49 | NC_008013 | TCTT | 2 | 8 | 25000 | 25007 | 0 % | 75 % | 0 % | 25 % | 94972391 |
50 | NC_008013 | AATC | 2 | 8 | 26088 | 26095 | 50 % | 25 % | 0 % | 25 % | 94972391 |
51 | NC_008013 | CATA | 2 | 8 | 26771 | 26778 | 50 % | 25 % | 0 % | 25 % | 94972392 |
52 | NC_008013 | CTTA | 2 | 8 | 26793 | 26800 | 25 % | 50 % | 0 % | 25 % | 94972392 |
53 | NC_008013 | AATT | 2 | 8 | 27599 | 27606 | 50 % | 50 % | 0 % | 0 % | 94972393 |
54 | NC_008013 | TAAT | 2 | 8 | 27676 | 27683 | 50 % | 50 % | 0 % | 0 % | 94972393 |
55 | NC_008013 | ACTG | 2 | 8 | 28105 | 28112 | 25 % | 25 % | 25 % | 25 % | 94972393 |
56 | NC_008013 | AGTA | 2 | 8 | 28148 | 28155 | 50 % | 25 % | 25 % | 0 % | 94972393 |
57 | NC_008013 | CTTT | 2 | 8 | 28279 | 28286 | 0 % | 75 % | 0 % | 25 % | 94972393 |
58 | NC_008013 | TAGA | 2 | 8 | 28528 | 28535 | 50 % | 25 % | 25 % | 0 % | 94972393 |
59 | NC_008013 | ATTA | 2 | 8 | 33853 | 33860 | 50 % | 50 % | 0 % | 0 % | 94972395 |
60 | NC_008013 | AGAA | 2 | 8 | 34615 | 34622 | 75 % | 0 % | 25 % | 0 % | 94972395 |
61 | NC_008013 | TGGG | 2 | 8 | 35914 | 35921 | 0 % | 25 % | 75 % | 0 % | 94972395 |
62 | NC_008013 | TTCT | 2 | 8 | 37472 | 37479 | 0 % | 75 % | 0 % | 25 % | 94972396 |
63 | NC_008013 | GAAA | 2 | 8 | 38669 | 38676 | 75 % | 0 % | 25 % | 0 % | 94972397 |
64 | NC_008013 | TTAA | 2 | 8 | 38745 | 38752 | 50 % | 50 % | 0 % | 0 % | 94972397 |
65 | NC_008013 | TTAC | 2 | 8 | 39195 | 39202 | 25 % | 50 % | 0 % | 25 % | 94972397 |
66 | NC_008013 | AAAG | 2 | 8 | 39318 | 39325 | 75 % | 0 % | 25 % | 0 % | 94972397 |