Tetra-nucleotide Coding Repeats of Lawsonia intracellularis PHE/MN1-00 plasmid 1
Total Repeats: 67
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008012 | ATTA | 2 | 8 | 411 | 418 | 50 % | 50 % | 0 % | 0 % | 94972344 |
2 | NC_008012 | TTAG | 2 | 8 | 856 | 863 | 25 % | 50 % | 25 % | 0 % | 94972344 |
3 | NC_008012 | CTTC | 2 | 8 | 1327 | 1334 | 0 % | 50 % | 0 % | 50 % | 94972344 |
4 | NC_008012 | ATAA | 2 | 8 | 2138 | 2145 | 75 % | 25 % | 0 % | 0 % | 94972346 |
5 | NC_008012 | ATCA | 2 | 8 | 2256 | 2263 | 50 % | 25 % | 0 % | 25 % | 94972346 |
6 | NC_008012 | AGCA | 2 | 8 | 2721 | 2728 | 50 % | 0 % | 25 % | 25 % | 94972347 |
7 | NC_008012 | AAAT | 2 | 8 | 3350 | 3357 | 75 % | 25 % | 0 % | 0 % | 94972348 |
8 | NC_008012 | AGAT | 2 | 8 | 3829 | 3836 | 50 % | 25 % | 25 % | 0 % | 94972348 |
9 | NC_008012 | GTAA | 2 | 8 | 3999 | 4006 | 50 % | 25 % | 25 % | 0 % | 94972348 |
10 | NC_008012 | AGAA | 2 | 8 | 4328 | 4335 | 75 % | 0 % | 25 % | 0 % | 94972348 |
11 | NC_008012 | TCTT | 2 | 8 | 4353 | 4360 | 0 % | 75 % | 0 % | 25 % | 94972348 |
12 | NC_008012 | GAAG | 2 | 8 | 4546 | 4553 | 50 % | 0 % | 50 % | 0 % | 94972348 |
13 | NC_008012 | TCTG | 2 | 8 | 4722 | 4729 | 0 % | 50 % | 25 % | 25 % | 94972348 |
14 | NC_008012 | TATT | 2 | 8 | 5040 | 5047 | 25 % | 75 % | 0 % | 0 % | 94972348 |
15 | NC_008012 | AAAT | 2 | 8 | 5127 | 5134 | 75 % | 25 % | 0 % | 0 % | 94972348 |
16 | NC_008012 | AAAG | 2 | 8 | 6049 | 6056 | 75 % | 0 % | 25 % | 0 % | 94972349 |
17 | NC_008012 | ATAA | 2 | 8 | 6209 | 6216 | 75 % | 25 % | 0 % | 0 % | 94972349 |
18 | NC_008012 | TATG | 2 | 8 | 7068 | 7075 | 25 % | 50 % | 25 % | 0 % | 94972350 |
19 | NC_008012 | TGGT | 2 | 8 | 8697 | 8704 | 0 % | 50 % | 50 % | 0 % | 94972352 |
20 | NC_008012 | ACAA | 2 | 8 | 8814 | 8821 | 75 % | 0 % | 0 % | 25 % | 94972352 |
21 | NC_008012 | TCTA | 2 | 8 | 8829 | 8836 | 25 % | 50 % | 0 % | 25 % | 94972352 |
22 | NC_008012 | AGAA | 2 | 8 | 9438 | 9445 | 75 % | 0 % | 25 % | 0 % | 94972352 |
23 | NC_008012 | ATAG | 2 | 8 | 9891 | 9898 | 50 % | 25 % | 25 % | 0 % | 94972353 |
24 | NC_008012 | TAAA | 2 | 8 | 10967 | 10974 | 75 % | 25 % | 0 % | 0 % | 94972354 |
25 | NC_008012 | TGTA | 2 | 8 | 11600 | 11607 | 25 % | 50 % | 25 % | 0 % | 94972355 |
26 | NC_008012 | CTAT | 2 | 8 | 11970 | 11977 | 25 % | 50 % | 0 % | 25 % | 94972355 |
27 | NC_008012 | AAAG | 2 | 8 | 12440 | 12447 | 75 % | 0 % | 25 % | 0 % | 94972356 |
28 | NC_008012 | TTAG | 2 | 8 | 13079 | 13086 | 25 % | 50 % | 25 % | 0 % | 94972357 |
29 | NC_008012 | AATA | 2 | 8 | 13404 | 13411 | 75 % | 25 % | 0 % | 0 % | 94972357 |
30 | NC_008012 | TATT | 2 | 8 | 13560 | 13567 | 25 % | 75 % | 0 % | 0 % | 94972357 |
31 | NC_008012 | TGTA | 2 | 8 | 13643 | 13650 | 25 % | 50 % | 25 % | 0 % | 94972357 |
32 | NC_008012 | TGAT | 2 | 8 | 13739 | 13746 | 25 % | 50 % | 25 % | 0 % | 94972357 |
33 | NC_008012 | TTTA | 2 | 8 | 14394 | 14401 | 25 % | 75 % | 0 % | 0 % | 94972358 |
34 | NC_008012 | GAAA | 2 | 8 | 14470 | 14477 | 75 % | 0 % | 25 % | 0 % | 94972358 |
35 | NC_008012 | TTTA | 2 | 8 | 14904 | 14911 | 25 % | 75 % | 0 % | 0 % | 94972358 |
36 | NC_008012 | AGAA | 2 | 8 | 15389 | 15396 | 75 % | 0 % | 25 % | 0 % | 94972359 |
37 | NC_008012 | TAAT | 2 | 8 | 15799 | 15806 | 50 % | 50 % | 0 % | 0 % | 94972359 |
38 | NC_008012 | TATC | 2 | 8 | 16252 | 16259 | 25 % | 50 % | 0 % | 25 % | 94972360 |
39 | NC_008012 | AAGG | 2 | 8 | 16978 | 16985 | 50 % | 0 % | 50 % | 0 % | 94972360 |
40 | NC_008012 | ATCC | 2 | 8 | 17933 | 17940 | 25 % | 25 % | 0 % | 50 % | 94972362 |
41 | NC_008012 | AACA | 2 | 8 | 18163 | 18170 | 75 % | 0 % | 0 % | 25 % | 94972362 |
42 | NC_008012 | TATT | 2 | 8 | 18259 | 18266 | 25 % | 75 % | 0 % | 0 % | 94972362 |
43 | NC_008012 | ATAA | 2 | 8 | 18653 | 18660 | 75 % | 25 % | 0 % | 0 % | 94972363 |
44 | NC_008012 | GGGA | 2 | 8 | 18693 | 18700 | 25 % | 0 % | 75 % | 0 % | 94972363 |
45 | NC_008012 | TTAA | 2 | 8 | 18815 | 18822 | 50 % | 50 % | 0 % | 0 % | 94972363 |
46 | NC_008012 | CTGT | 2 | 8 | 19751 | 19758 | 0 % | 50 % | 25 % | 25 % | 94972365 |
47 | NC_008012 | TTCT | 2 | 8 | 20420 | 20427 | 0 % | 75 % | 0 % | 25 % | 94972366 |
48 | NC_008012 | AAAT | 2 | 8 | 20497 | 20504 | 75 % | 25 % | 0 % | 0 % | 94972366 |
49 | NC_008012 | AAAT | 2 | 8 | 20542 | 20549 | 75 % | 25 % | 0 % | 0 % | 94972366 |
50 | NC_008012 | TGAA | 2 | 8 | 21224 | 21231 | 50 % | 25 % | 25 % | 0 % | 94972367 |
51 | NC_008012 | AAAG | 2 | 8 | 21357 | 21364 | 75 % | 0 % | 25 % | 0 % | 94972367 |
52 | NC_008012 | ATCA | 2 | 8 | 23395 | 23402 | 50 % | 25 % | 0 % | 25 % | 94972370 |
53 | NC_008012 | AGTT | 2 | 8 | 23563 | 23570 | 25 % | 50 % | 25 % | 0 % | 94972370 |
54 | NC_008012 | GTAA | 2 | 8 | 23585 | 23592 | 50 % | 25 % | 25 % | 0 % | 94972370 |
55 | NC_008012 | TTTC | 2 | 8 | 23692 | 23699 | 0 % | 75 % | 0 % | 25 % | 94972370 |
56 | NC_008012 | CATT | 2 | 8 | 24141 | 24148 | 25 % | 50 % | 0 % | 25 % | 94972370 |
57 | NC_008012 | TTTA | 2 | 8 | 24825 | 24832 | 25 % | 75 % | 0 % | 0 % | 94972371 |
58 | NC_008012 | ATTT | 2 | 8 | 25201 | 25208 | 25 % | 75 % | 0 % | 0 % | 94972371 |
59 | NC_008012 | GGCT | 2 | 8 | 25343 | 25350 | 0 % | 25 % | 50 % | 25 % | 94972371 |
60 | NC_008012 | TACT | 2 | 8 | 25449 | 25456 | 25 % | 50 % | 0 % | 25 % | 94972371 |
61 | NC_008012 | GTAT | 2 | 8 | 25509 | 25516 | 25 % | 50 % | 25 % | 0 % | 94972371 |
62 | NC_008012 | GGTA | 2 | 8 | 25989 | 25996 | 25 % | 25 % | 50 % | 0 % | 94972372 |
63 | NC_008012 | ATTG | 2 | 8 | 26311 | 26318 | 25 % | 50 % | 25 % | 0 % | 94972372 |
64 | NC_008012 | CAAT | 2 | 8 | 26342 | 26349 | 50 % | 25 % | 0 % | 25 % | 94972372 |
65 | NC_008012 | TAAA | 2 | 8 | 26456 | 26463 | 75 % | 25 % | 0 % | 0 % | 94972372 |
66 | NC_008012 | TAGA | 2 | 8 | 26516 | 26523 | 50 % | 25 % | 25 % | 0 % | 94972372 |
67 | NC_008012 | AAGT | 2 | 8 | 26704 | 26711 | 50 % | 25 % | 25 % | 0 % | 94972372 |