Penta-nucleotide Non-Coding Repeats of Deinococcus geothermalis DSM 11300 plasmid pDGEO01
Total Repeats: 53
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008010 | CTCCA | 2 | 10 | 10 | 19 | 20 % | 20 % | 0 % | 60 % | Non-Coding |
2 | NC_008010 | TTGGT | 2 | 10 | 2469 | 2478 | 0 % | 60 % | 40 % | 0 % | Non-Coding |
3 | NC_008010 | CGAGC | 2 | 10 | 8638 | 8647 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
4 | NC_008010 | TCGTG | 2 | 10 | 9929 | 9938 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
5 | NC_008010 | AATTG | 2 | 10 | 12635 | 12644 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
6 | NC_008010 | GCGAA | 2 | 10 | 22249 | 22258 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
7 | NC_008010 | GTGCG | 2 | 10 | 57747 | 57756 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
8 | NC_008010 | TCACG | 2 | 10 | 69623 | 69632 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
9 | NC_008010 | GCGGG | 2 | 10 | 81082 | 81091 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
10 | NC_008010 | CGGAC | 2 | 10 | 89879 | 89888 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
11 | NC_008010 | TGGGG | 2 | 10 | 109621 | 109630 | 0 % | 20 % | 80 % | 0 % | Non-Coding |
12 | NC_008010 | CCGAC | 2 | 10 | 146481 | 146490 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
13 | NC_008010 | AGTGG | 2 | 10 | 150406 | 150415 | 20 % | 20 % | 60 % | 0 % | Non-Coding |
14 | NC_008010 | CAACG | 2 | 10 | 153147 | 153156 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
15 | NC_008010 | CAACC | 2 | 10 | 167571 | 167580 | 40 % | 0 % | 0 % | 60 % | Non-Coding |
16 | NC_008010 | GGTCC | 2 | 10 | 185945 | 185954 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
17 | NC_008010 | CCCGC | 2 | 10 | 188267 | 188276 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
18 | NC_008010 | AGGGG | 2 | 10 | 201845 | 201854 | 20 % | 0 % | 80 % | 0 % | Non-Coding |
19 | NC_008010 | GTGAA | 2 | 10 | 205725 | 205734 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
20 | NC_008010 | TTGGT | 2 | 10 | 214329 | 214338 | 0 % | 60 % | 40 % | 0 % | Non-Coding |
21 | NC_008010 | GGGGT | 2 | 10 | 218222 | 218231 | 0 % | 20 % | 80 % | 0 % | Non-Coding |
22 | NC_008010 | AGTCA | 2 | 10 | 220003 | 220012 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
23 | NC_008010 | TTTCC | 2 | 10 | 221383 | 221392 | 0 % | 60 % | 0 % | 40 % | Non-Coding |
24 | NC_008010 | AGGTC | 2 | 10 | 221639 | 221648 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
25 | NC_008010 | TGCCT | 2 | 10 | 222371 | 222380 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
26 | NC_008010 | CCGGA | 2 | 10 | 227278 | 227287 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
27 | NC_008010 | CCGTT | 2 | 10 | 229955 | 229964 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
28 | NC_008010 | TGGGA | 2 | 10 | 230810 | 230819 | 20 % | 20 % | 60 % | 0 % | Non-Coding |
29 | NC_008010 | GCCCC | 2 | 10 | 238204 | 238213 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
30 | NC_008010 | CGGGA | 2 | 10 | 249160 | 249169 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
31 | NC_008010 | CTTTT | 2 | 10 | 258859 | 258868 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
32 | NC_008010 | GGGGC | 2 | 10 | 315143 | 315152 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
33 | NC_008010 | CAGGA | 2 | 10 | 345380 | 345389 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
34 | NC_008010 | ACACC | 2 | 10 | 361122 | 361131 | 40 % | 0 % | 0 % | 60 % | Non-Coding |
35 | NC_008010 | CCCCG | 2 | 10 | 376940 | 376949 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
36 | NC_008010 | TCGCT | 2 | 10 | 402717 | 402726 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
37 | NC_008010 | GCCGC | 3 | 15 | 404104 | 404118 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
38 | NC_008010 | ACGCC | 2 | 10 | 406608 | 406617 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
39 | NC_008010 | AAACG | 2 | 10 | 429115 | 429124 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
40 | NC_008010 | TTCCT | 2 | 10 | 440717 | 440726 | 0 % | 60 % | 0 % | 40 % | Non-Coding |
41 | NC_008010 | GGCGT | 2 | 10 | 460744 | 460753 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
42 | NC_008010 | CCCCG | 2 | 10 | 475599 | 475608 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
43 | NC_008010 | CTACG | 2 | 10 | 479836 | 479845 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
44 | NC_008010 | GGAGA | 2 | 10 | 479880 | 479889 | 40 % | 0 % | 60 % | 0 % | Non-Coding |
45 | NC_008010 | CGGCG | 2 | 10 | 487267 | 487276 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
46 | NC_008010 | TCACC | 2 | 10 | 487339 | 487348 | 20 % | 20 % | 0 % | 60 % | Non-Coding |
47 | NC_008010 | AGTTC | 2 | 10 | 487656 | 487665 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
48 | NC_008010 | CTGCC | 2 | 10 | 501115 | 501124 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
49 | NC_008010 | CGGAA | 2 | 10 | 509542 | 509551 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
50 | NC_008010 | CGCTG | 2 | 10 | 517763 | 517772 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
51 | NC_008010 | CCCTG | 2 | 10 | 550400 | 550409 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
52 | NC_008010 | GCCCG | 2 | 10 | 553541 | 553550 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
53 | NC_008010 | CCTCC | 2 | 10 | 556161 | 556170 | 0 % | 20 % | 0 % | 80 % | Non-Coding |