MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Coding Repeats of Nitrobacter hamburgensis X14 plasmid 3

Total Repeats: 39

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_007961	CGAGGC	2	12	220	231	16.67 %	0 %	50 %	33.33 %	92109664
2	NC_007961	CGCCGG	2	12	1339	1350	0 %	0 %	50 %	50 %	92109664
3	NC_007961	CCGGCG	2	12	3479	3490	0 %	0 %	50 %	50 %	92109665
4	NC_007961	CTCGGC	2	12	4102	4113	0 %	16.67 %	33.33 %	50 %	92109666
5	NC_007961	CCGGTC	2	12	4826	4837	0 %	16.67 %	33.33 %	50 %	92109666
6	NC_007961	TTCCGA	2	12	9613	9624	16.67 %	33.33 %	16.67 %	33.33 %	92109671
7	NC_007961	CGCCGG	2	12	18042	18053	0 %	0 %	50 %	50 %	92109682
8	NC_007961	GGCAGC	2	12	18541	18552	16.67 %	0 %	50 %	33.33 %	92109682
9	NC_007961	TTGGCG	2	12	19363	19374	0 %	33.33 %	50 %	16.67 %	92109684
10	NC_007961	CGGCGC	2	12	20618	20629	0 %	0 %	50 %	50 %	92109685
11	NC_007961	GACTGC	2	12	27613	27624	16.67 %	16.67 %	33.33 %	33.33 %	92109692
12	NC_007961	TCTGAA	2	12	29890	29901	33.33 %	33.33 %	16.67 %	16.67 %	92109694
13	NC_007961	GAGCGG	2	12	36397	36408	16.67 %	0 %	66.67 %	16.67 %	92109702
14	NC_007961	AAGTCG	2	12	46378	46389	33.33 %	16.67 %	33.33 %	16.67 %	92109709
15	NC_007961	GCGACC	2	12	53456	53467	16.67 %	0 %	33.33 %	50 %	92109714
16	NC_007961	TCCCTC	2	12	60042	60053	0 %	33.33 %	0 %	66.67 %	92109717
17	NC_007961	CGATGG	2	12	60205	60216	16.67 %	16.67 %	50 %	16.67 %	92109717
18	NC_007961	CATCGT	2	12	60920	60931	16.67 %	33.33 %	16.67 %	33.33 %	92109717
19	NC_007961	GGAGGC	2	12	62542	62553	16.67 %	0 %	66.67 %	16.67 %	92109719
20	NC_007961	AAGCGC	2	12	62912	62923	33.33 %	0 %	33.33 %	33.33 %	92109719
21	NC_007961	TTTCCG	2	12	75320	75331	0 %	50 %	16.67 %	33.33 %	92109728
22	NC_007961	TCGGCA	2	12	75380	75391	16.67 %	16.67 %	33.33 %	33.33 %	92109728
23	NC_007961	CGGGGC	2	12	77119	77130	0 %	0 %	66.67 %	33.33 %	92109730
24	NC_007961	CGGTAC	2	12	81912	81923	16.67 %	16.67 %	33.33 %	33.33 %	92109735
25	NC_007961	CTGCGC	2	12	82873	82884	0 %	16.67 %	33.33 %	50 %	92109735
26	NC_007961	GTGCTG	2	12	84963	84974	0 %	33.33 %	50 %	16.67 %	92109738
27	NC_007961	GTTGGC	2	12	85211	85222	0 %	33.33 %	50 %	16.67 %	92109738
28	NC_007961	CGTGTG	2	12	87119	87130	0 %	33.33 %	50 %	16.67 %	92109739
29	NC_007961	GGAGCC	2	12	88879	88890	16.67 %	0 %	50 %	33.33 %	92109742
30	NC_007961	GCCAAC	3	18	96444	96461	33.33 %	0 %	16.67 %	50 %	92109751
31	NC_007961	TGGGCC	2	12	96917	96928	0 %	16.67 %	50 %	33.33 %	92109752
32	NC_007961	TGTCGC	2	12	97547	97558	0 %	33.33 %	33.33 %	33.33 %	92109753
33	NC_007961	CGGCCT	2	12	103278	103289	0 %	16.67 %	33.33 %	50 %	92109757
34	NC_007961	GCCTGC	2	12	104051	104062	0 %	16.67 %	33.33 %	50 %	92109757
35	NC_007961	CTTCGC	2	12	108213	108224	0 %	33.33 %	16.67 %	50 %	92109757
36	NC_007961	GGACTG	2	12	115016	115027	16.67 %	16.67 %	50 %	16.67 %	92109766
37	NC_007961	CCCATC	2	12	118502	118513	16.67 %	16.67 %	0 %	66.67 %	92109771
38	NC_007961	CGGCTC	2	12	119713	119724	0 %	16.67 %	33.33 %	50 %	92109772
39	NC_007961	ATCTCG	2	12	121150	121161	16.67 %	33.33 %	16.67 %	33.33 %	92109774

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.