Hexa-nucleotide Repeats of Nitrobacter hamburgensis X14 plasmid 1
Total Repeats: 137
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_007959 | ATCGGC | 2 | 12 | 1457 | 1468 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
2 | NC_007959 | CCAGCT | 2 | 12 | 2843 | 2854 | 16.67 % | 16.67 % | 16.67 % | 50 % | 92109253 |
3 | NC_007959 | GCACCT | 2 | 12 | 3224 | 3235 | 16.67 % | 16.67 % | 16.67 % | 50 % | 92109253 |
4 | NC_007959 | GGCCGC | 2 | 12 | 6226 | 6237 | 0 % | 0 % | 50 % | 50 % | 92109256 |
5 | NC_007959 | CTGCAT | 2 | 12 | 8148 | 8159 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 92109257 |
6 | NC_007959 | GTTCTC | 2 | 12 | 10521 | 10532 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
7 | NC_007959 | GCAAGG | 2 | 12 | 11288 | 11299 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
8 | NC_007959 | CTTTCT | 2 | 12 | 13766 | 13777 | 0 % | 66.67 % | 0 % | 33.33 % | 92109262 |
9 | NC_007959 | CTCGTT | 2 | 12 | 13941 | 13952 | 0 % | 50 % | 16.67 % | 33.33 % | 92109262 |
10 | NC_007959 | CTCGGG | 2 | 12 | 24470 | 24481 | 0 % | 16.67 % | 50 % | 33.33 % | 92109266 |
11 | NC_007959 | CGGTCG | 2 | 12 | 25144 | 25155 | 0 % | 16.67 % | 50 % | 33.33 % | 92109266 |
12 | NC_007959 | GTGGCC | 2 | 12 | 25336 | 25347 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
13 | NC_007959 | TTCTCG | 2 | 12 | 30753 | 30764 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
14 | NC_007959 | CGAGCC | 2 | 12 | 31651 | 31662 | 16.67 % | 0 % | 33.33 % | 50 % | Non-Coding |
15 | NC_007959 | TCGAGA | 2 | 12 | 33240 | 33251 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
16 | NC_007959 | TCTCGG | 2 | 12 | 38026 | 38037 | 0 % | 33.33 % | 33.33 % | 33.33 % | 92109275 |
17 | NC_007959 | GTTGGC | 2 | 12 | 39071 | 39082 | 0 % | 33.33 % | 50 % | 16.67 % | 92109276 |
18 | NC_007959 | GGTCGA | 2 | 12 | 39134 | 39145 | 16.67 % | 16.67 % | 50 % | 16.67 % | 92109276 |
19 | NC_007959 | CGAGGC | 2 | 12 | 41256 | 41267 | 16.67 % | 0 % | 50 % | 33.33 % | 92109278 |
20 | NC_007959 | GCTGAC | 2 | 12 | 44705 | 44716 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 92109280 |
21 | NC_007959 | ATCGGC | 2 | 12 | 47656 | 47667 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
22 | NC_007959 | GAAAAT | 2 | 12 | 50658 | 50669 | 66.67 % | 16.67 % | 16.67 % | 0 % | 92109283 |
23 | NC_007959 | TCGGCC | 2 | 12 | 51301 | 51312 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
24 | NC_007959 | TTCGGT | 2 | 12 | 55329 | 55340 | 0 % | 50 % | 33.33 % | 16.67 % | 92109289 |
25 | NC_007959 | GCCATC | 2 | 12 | 55929 | 55940 | 16.67 % | 16.67 % | 16.67 % | 50 % | 92109289 |
26 | NC_007959 | GGCGAC | 2 | 12 | 59457 | 59468 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
27 | NC_007959 | CTGGAG | 2 | 12 | 60499 | 60510 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
28 | NC_007959 | GTGGTC | 2 | 12 | 60960 | 60971 | 0 % | 33.33 % | 50 % | 16.67 % | Non-Coding |
29 | NC_007959 | GAAGGC | 2 | 12 | 64334 | 64345 | 33.33 % | 0 % | 50 % | 16.67 % | 92109291 |
30 | NC_007959 | TCGGCA | 2 | 12 | 65933 | 65944 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 92109292 |
31 | NC_007959 | GTGTCG | 2 | 12 | 67932 | 67943 | 0 % | 33.33 % | 50 % | 16.67 % | 92109295 |
32 | NC_007959 | CTGAAA | 2 | 12 | 72944 | 72955 | 50 % | 16.67 % | 16.67 % | 16.67 % | 92109303 |
33 | NC_007959 | AGGCCG | 2 | 12 | 74247 | 74258 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
34 | NC_007959 | GTCGCC | 2 | 12 | 78870 | 78881 | 0 % | 16.67 % | 33.33 % | 50 % | 92109309 |
35 | NC_007959 | CGGTCG | 2 | 12 | 80971 | 80982 | 0 % | 16.67 % | 50 % | 33.33 % | 92109311 |
36 | NC_007959 | TACGTG | 2 | 12 | 82980 | 82991 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
37 | NC_007959 | ATGCCA | 2 | 12 | 84234 | 84245 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
38 | NC_007959 | CAAGTC | 2 | 12 | 87396 | 87407 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 92109316 |
39 | NC_007959 | GCGACC | 2 | 12 | 88480 | 88491 | 16.67 % | 0 % | 33.33 % | 50 % | 92109317 |
40 | NC_007959 | CGTCCG | 2 | 12 | 90772 | 90783 | 0 % | 16.67 % | 33.33 % | 50 % | 92109318 |
41 | NC_007959 | CGCCTA | 2 | 12 | 90967 | 90978 | 16.67 % | 16.67 % | 16.67 % | 50 % | 92109318 |
42 | NC_007959 | GCGCCC | 2 | 12 | 91060 | 91071 | 0 % | 0 % | 33.33 % | 66.67 % | 92109318 |
43 | NC_007959 | CACGTA | 2 | 12 | 91736 | 91747 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
44 | NC_007959 | GCGTTT | 2 | 12 | 95508 | 95519 | 0 % | 50 % | 33.33 % | 16.67 % | Non-Coding |
45 | NC_007959 | CCAGCC | 2 | 12 | 97241 | 97252 | 16.67 % | 0 % | 16.67 % | 66.67 % | 92109320 |
46 | NC_007959 | TGTCGG | 2 | 12 | 100859 | 100870 | 0 % | 33.33 % | 50 % | 16.67 % | Non-Coding |
47 | NC_007959 | TCATTA | 2 | 12 | 105117 | 105128 | 33.33 % | 50 % | 0 % | 16.67 % | 92109325 |
48 | NC_007959 | AGCCGA | 2 | 12 | 109121 | 109132 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
49 | NC_007959 | TCGGCA | 2 | 12 | 114337 | 114348 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
50 | NC_007959 | GGTCGG | 2 | 12 | 119646 | 119657 | 0 % | 16.67 % | 66.67 % | 16.67 % | Non-Coding |
51 | NC_007959 | AGCATT | 2 | 12 | 120266 | 120277 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 92109333 |
52 | NC_007959 | CGTCCG | 2 | 12 | 123794 | 123805 | 0 % | 16.67 % | 33.33 % | 50 % | 92109336 |
53 | NC_007959 | CGCCTA | 2 | 12 | 123989 | 124000 | 16.67 % | 16.67 % | 16.67 % | 50 % | 92109336 |
54 | NC_007959 | GCGCCC | 2 | 12 | 124082 | 124093 | 0 % | 0 % | 33.33 % | 66.67 % | 92109336 |
55 | NC_007959 | GACGCT | 2 | 12 | 126329 | 126340 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 92109337 |
56 | NC_007959 | GGCAAC | 2 | 12 | 126611 | 126622 | 33.33 % | 0 % | 33.33 % | 33.33 % | 92109337 |
57 | NC_007959 | GCGCTC | 2 | 12 | 127238 | 127249 | 0 % | 16.67 % | 33.33 % | 50 % | 92109337 |
58 | NC_007959 | CATTTT | 2 | 12 | 129402 | 129413 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
59 | NC_007959 | GCCGAT | 2 | 12 | 129888 | 129899 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
60 | NC_007959 | AGGCCG | 2 | 12 | 136429 | 136440 | 16.67 % | 0 % | 50 % | 33.33 % | 92109345 |
61 | NC_007959 | CCCGCC | 2 | 12 | 139711 | 139722 | 0 % | 0 % | 16.67 % | 83.33 % | 92109348 |
62 | NC_007959 | CGATAG | 2 | 12 | 139852 | 139863 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 92109348 |
63 | NC_007959 | AGGCCG | 3 | 18 | 140743 | 140760 | 16.67 % | 0 % | 50 % | 33.33 % | 92109350 |
64 | NC_007959 | GCGAGC | 2 | 12 | 141475 | 141486 | 16.67 % | 0 % | 50 % | 33.33 % | 92109350 |
65 | NC_007959 | GCCGTC | 2 | 12 | 141974 | 141985 | 0 % | 16.67 % | 33.33 % | 50 % | 92109351 |
66 | NC_007959 | AAGCAG | 2 | 12 | 142238 | 142249 | 50 % | 0 % | 33.33 % | 16.67 % | 92109351 |
67 | NC_007959 | CACGGC | 2 | 12 | 142273 | 142284 | 16.67 % | 0 % | 33.33 % | 50 % | 92109352 |
68 | NC_007959 | GATGGC | 2 | 12 | 147129 | 147140 | 16.67 % | 16.67 % | 50 % | 16.67 % | 92109355 |
69 | NC_007959 | TCGTGC | 2 | 12 | 149902 | 149913 | 0 % | 33.33 % | 33.33 % | 33.33 % | 92109357 |
70 | NC_007959 | CTGCAT | 2 | 12 | 151186 | 151197 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 92109358 |
71 | NC_007959 | GCATTG | 2 | 12 | 152356 | 152367 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 92109359 |
72 | NC_007959 | CCGGCG | 2 | 12 | 153160 | 153171 | 0 % | 0 % | 50 % | 50 % | 92109361 |
73 | NC_007959 | GAAGGC | 2 | 12 | 156976 | 156987 | 33.33 % | 0 % | 50 % | 16.67 % | 92109364 |
74 | NC_007959 | GCCGAA | 2 | 12 | 158213 | 158224 | 33.33 % | 0 % | 33.33 % | 33.33 % | 92109365 |
75 | NC_007959 | TCCTGC | 2 | 12 | 163029 | 163040 | 0 % | 33.33 % | 16.67 % | 50 % | 92109369 |
76 | NC_007959 | CGCATT | 2 | 12 | 163672 | 163683 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 92109370 |
77 | NC_007959 | CCAGCC | 2 | 12 | 165398 | 165409 | 16.67 % | 0 % | 16.67 % | 66.67 % | Non-Coding |
78 | NC_007959 | TTCGCA | 2 | 12 | 167687 | 167698 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 92109373 |
79 | NC_007959 | TTCGAC | 2 | 12 | 172046 | 172057 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 92109378 |
80 | NC_007959 | GCTTGA | 2 | 12 | 173038 | 173049 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
81 | NC_007959 | CCGGTA | 2 | 12 | 173753 | 173764 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 92109380 |
82 | NC_007959 | CCGGCA | 2 | 12 | 179429 | 179440 | 16.67 % | 0 % | 33.33 % | 50 % | 92109384 |
83 | NC_007959 | ATCTCC | 2 | 12 | 179495 | 179506 | 16.67 % | 33.33 % | 0 % | 50 % | 92109384 |
84 | NC_007959 | GCGCCA | 2 | 12 | 187267 | 187278 | 16.67 % | 0 % | 33.33 % | 50 % | 92109393 |
85 | NC_007959 | CGGTCG | 2 | 12 | 188291 | 188302 | 0 % | 16.67 % | 50 % | 33.33 % | 92109394 |
86 | NC_007959 | TGCGCG | 2 | 12 | 189000 | 189011 | 0 % | 16.67 % | 50 % | 33.33 % | 92109395 |
87 | NC_007959 | CAAGTC | 2 | 12 | 192299 | 192310 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 92109398 |
88 | NC_007959 | CGGCGC | 2 | 12 | 195765 | 195776 | 0 % | 0 % | 50 % | 50 % | 92109401 |
89 | NC_007959 | TCGAGA | 2 | 12 | 199883 | 199894 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
90 | NC_007959 | TCACGA | 2 | 12 | 205952 | 205963 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 92109408 |
91 | NC_007959 | TTCGGT | 2 | 12 | 211605 | 211616 | 0 % | 50 % | 33.33 % | 16.67 % | 92109414 |
92 | NC_007959 | CCGCCA | 2 | 12 | 212915 | 212926 | 16.67 % | 0 % | 16.67 % | 66.67 % | Non-Coding |
93 | NC_007959 | AAGGAA | 2 | 12 | 214594 | 214605 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
94 | NC_007959 | TCGTAT | 2 | 12 | 214981 | 214992 | 16.67 % | 50 % | 16.67 % | 16.67 % | 92109416 |
95 | NC_007959 | CCCGTC | 2 | 12 | 223418 | 223429 | 0 % | 16.67 % | 16.67 % | 66.67 % | 92109423 |
96 | NC_007959 | TCGAGA | 2 | 12 | 225802 | 225813 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 92109426 |
97 | NC_007959 | CGGCCT | 2 | 12 | 227195 | 227206 | 0 % | 16.67 % | 33.33 % | 50 % | 92109428 |
98 | NC_007959 | CGCCTC | 2 | 12 | 227871 | 227882 | 0 % | 16.67 % | 16.67 % | 66.67 % | 92109428 |
99 | NC_007959 | GTCTGA | 2 | 12 | 233683 | 233694 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 92109435 |
100 | NC_007959 | TCGCGC | 2 | 12 | 240736 | 240747 | 0 % | 16.67 % | 33.33 % | 50 % | 92109439 |
101 | NC_007959 | GGAAGC | 2 | 12 | 241179 | 241190 | 33.33 % | 0 % | 50 % | 16.67 % | 92109440 |
102 | NC_007959 | CGTCCG | 2 | 12 | 243613 | 243624 | 0 % | 16.67 % | 33.33 % | 50 % | 92109441 |
103 | NC_007959 | CGCCTA | 2 | 12 | 243808 | 243819 | 16.67 % | 16.67 % | 16.67 % | 50 % | 92109441 |
104 | NC_007959 | GCGCCC | 2 | 12 | 243901 | 243912 | 0 % | 0 % | 33.33 % | 66.67 % | 92109441 |
105 | NC_007959 | CACGTA | 2 | 12 | 244577 | 244588 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 92109442 |
106 | NC_007959 | GATGAC | 2 | 12 | 246597 | 246608 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
107 | NC_007959 | GTAATG | 2 | 12 | 247432 | 247443 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
108 | NC_007959 | TTGGTT | 2 | 12 | 248455 | 248466 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
109 | NC_007959 | TCGCGG | 2 | 12 | 249918 | 249929 | 0 % | 16.67 % | 50 % | 33.33 % | 92109446 |
110 | NC_007959 | CCGGTC | 2 | 12 | 251299 | 251310 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
111 | NC_007959 | TTCCGA | 2 | 12 | 255844 | 255855 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 92109453 |
112 | NC_007959 | TCGCCT | 2 | 12 | 258040 | 258051 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
113 | NC_007959 | GTAGGC | 2 | 12 | 258847 | 258858 | 16.67 % | 16.67 % | 50 % | 16.67 % | 92109458 |
114 | NC_007959 | CGGACG | 2 | 12 | 259043 | 259054 | 16.67 % | 0 % | 50 % | 33.33 % | 92109458 |
115 | NC_007959 | CACCCG | 2 | 12 | 262374 | 262385 | 16.67 % | 0 % | 16.67 % | 66.67 % | Non-Coding |
116 | NC_007959 | CTCGTG | 2 | 12 | 265329 | 265340 | 0 % | 33.33 % | 33.33 % | 33.33 % | 92109463 |
117 | NC_007959 | GCAGGT | 2 | 12 | 267064 | 267075 | 16.67 % | 16.67 % | 50 % | 16.67 % | 92109464 |
118 | NC_007959 | CGAGCG | 2 | 12 | 267607 | 267618 | 16.67 % | 0 % | 50 % | 33.33 % | 92109464 |
119 | NC_007959 | GGTCAA | 2 | 12 | 268711 | 268722 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 92109464 |
120 | NC_007959 | TCACCA | 2 | 12 | 269402 | 269413 | 33.33 % | 16.67 % | 0 % | 50 % | Non-Coding |
121 | NC_007959 | ACCGGC | 2 | 12 | 269542 | 269553 | 16.67 % | 0 % | 33.33 % | 50 % | Non-Coding |
122 | NC_007959 | GAGACC | 2 | 12 | 269647 | 269658 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
123 | NC_007959 | TCCTCG | 2 | 12 | 269707 | 269718 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
124 | NC_007959 | CTCGTG | 2 | 12 | 272248 | 272259 | 0 % | 33.33 % | 33.33 % | 33.33 % | 92109467 |
125 | NC_007959 | GCAGGT | 2 | 12 | 273983 | 273994 | 16.67 % | 16.67 % | 50 % | 16.67 % | 92109468 |
126 | NC_007959 | CGAGCG | 2 | 12 | 274526 | 274537 | 16.67 % | 0 % | 50 % | 33.33 % | 92109468 |
127 | NC_007959 | GGTCAA | 2 | 12 | 275630 | 275641 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 92109468 |
128 | NC_007959 | CCAGCT | 2 | 12 | 276275 | 276286 | 16.67 % | 16.67 % | 16.67 % | 50 % | 92109470 |
129 | NC_007959 | GCACCT | 2 | 12 | 276656 | 276667 | 16.67 % | 16.67 % | 16.67 % | 50 % | 92109470 |
130 | NC_007959 | AGTTCG | 2 | 12 | 278612 | 278623 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 92109471 |
131 | NC_007959 | TCGCCA | 2 | 12 | 278639 | 278650 | 16.67 % | 16.67 % | 16.67 % | 50 % | 92109471 |
132 | NC_007959 | GGCCAG | 2 | 12 | 281107 | 281118 | 16.67 % | 0 % | 50 % | 33.33 % | 92109473 |
133 | NC_007959 | GCTGGC | 2 | 12 | 282935 | 282946 | 0 % | 16.67 % | 50 % | 33.33 % | 92109474 |
134 | NC_007959 | TGCCGG | 2 | 12 | 283168 | 283179 | 0 % | 16.67 % | 50 % | 33.33 % | 92109474 |
135 | NC_007959 | ACGTCA | 2 | 12 | 285282 | 285293 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 92109479 |
136 | NC_007959 | CTCGAC | 2 | 12 | 288309 | 288320 | 16.67 % | 16.67 % | 16.67 % | 50 % | 92109483 |
137 | NC_007959 | CGAGGC | 2 | 12 | 290190 | 290201 | 16.67 % | 0 % | 50 % | 33.33 % | 92109484 |