MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Synechococcus elongatus PCC 7942 plasmid 1

Total Repeats: 95

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_007595	CAA	2	6	3	8	66.67 %	0 %	0 %	33.33 %	Non-Coding
2	NC_007595	ATA	2	6	450	455	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_007595	ACC	2	6	1975	1980	33.33 %	0 %	0 %	66.67 %	Non-Coding
4	NC_007595	CAT	2	6	3096	3101	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5	NC_007595	CTC	2	6	5244	5249	0 %	33.33 %	0 %	66.67 %	Non-Coding
6	NC_007595	GTT	2	6	8251	8256	0 %	66.67 %	33.33 %	0 %	Non-Coding
7	NC_007595	CAA	2	6	8378	8383	66.67 %	0 %	0 %	33.33 %	Non-Coding
8	NC_007595	TAA	2	6	8393	8398	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_007595	GAT	2	6	9191	9196	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
10	NC_007595	TCT	2	6	9242	9247	0 %	66.67 %	0 %	33.33 %	Non-Coding
11	NC_007595	ATT	2	6	9267	9272	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_007595	TCG	2	6	10387	10392	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
13	NC_007595	TGC	2	6	10427	10432	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
14	NC_007595	CAG	2	6	10468	10473	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
15	NC_007595	ACG	2	6	10582	10587	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
16	NC_007595	TTG	2	6	13012	13017	0 %	66.67 %	33.33 %	0 %	Non-Coding
17	NC_007595	TAA	2	6	13033	13038	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_007595	ATC	2	6	13050	13055	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19	NC_007595	GCA	2	6	17004	17009	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
20	NC_007595	TTG	2	6	17011	17016	0 %	66.67 %	33.33 %	0 %	Non-Coding
21	NC_007595	GGC	2	6	21672	21677	0 %	0 %	66.67 %	33.33 %	Non-Coding
22	NC_007595	TCA	2	6	21705	21710	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
23	NC_007595	GTC	2	6	21772	21777	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
24	NC_007595	CAG	2	6	22470	22475	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
25	NC_007595	GTC	2	6	22521	22526	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
26	NC_007595	TAT	2	6	22650	22655	33.33 %	66.67 %	0 %	0 %	Non-Coding
27	NC_007595	TCA	2	6	23583	23588	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
28	NC_007595	TCT	2	6	24340	24345	0 %	66.67 %	0 %	33.33 %	Non-Coding
29	NC_007595	CTC	2	6	24477	24482	0 %	33.33 %	0 %	66.67 %	Non-Coding
30	NC_007595	GCT	2	6	24668	24673	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
31	NC_007595	ACC	2	6	24788	24793	33.33 %	0 %	0 %	66.67 %	Non-Coding
32	NC_007595	CGC	2	6	24797	24802	0 %	0 %	33.33 %	66.67 %	Non-Coding
33	NC_007595	GAG	2	6	24858	24863	33.33 %	0 %	66.67 %	0 %	Non-Coding
34	NC_007595	CAG	3	9	27875	27883	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
35	NC_007595	TTG	2	6	29007	29012	0 %	66.67 %	33.33 %	0 %	Non-Coding
36	NC_007595	CGC	2	6	29503	29508	0 %	0 %	33.33 %	66.67 %	Non-Coding
37	NC_007595	GCA	2	6	29605	29610	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
38	NC_007595	GCC	2	6	29694	29699	0 %	0 %	33.33 %	66.67 %	Non-Coding
39	NC_007595	TGC	2	6	29714	29719	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
40	NC_007595	GGC	2	6	29844	29849	0 %	0 %	66.67 %	33.33 %	Non-Coding
41	NC_007595	TGA	2	6	29914	29919	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
42	NC_007595	AGA	2	6	31352	31357	66.67 %	0 %	33.33 %	0 %	Non-Coding
43	NC_007595	ACT	2	6	31421	31426	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
44	NC_007595	AAT	2	6	31434	31439	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_007595	TGT	2	6	31446	31451	0 %	66.67 %	33.33 %	0 %	Non-Coding
46	NC_007595	AGA	2	6	31461	31466	66.67 %	0 %	33.33 %	0 %	Non-Coding
47	NC_007595	ATG	2	6	31702	31707	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
48	NC_007595	ATC	2	6	31724	31729	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
49	NC_007595	TGA	2	6	32863	32868	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
50	NC_007595	CGC	2	6	32898	32903	0 %	0 %	33.33 %	66.67 %	Non-Coding
51	NC_007595	CGC	2	6	33189	33194	0 %	0 %	33.33 %	66.67 %	Non-Coding
52	NC_007595	CGA	2	6	33795	33800	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
53	NC_007595	AGC	2	6	33941	33946	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
54	NC_007595	GAA	2	6	33953	33958	66.67 %	0 %	33.33 %	0 %	Non-Coding
55	NC_007595	TTG	2	6	33959	33964	0 %	66.67 %	33.33 %	0 %	Non-Coding
56	NC_007595	GCT	2	6	34021	34026	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
57	NC_007595	CAG	2	6	34399	34404	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
58	NC_007595	GTT	2	6	34425	34430	0 %	66.67 %	33.33 %	0 %	Non-Coding
59	NC_007595	CCG	2	6	35137	35142	0 %	0 %	33.33 %	66.67 %	Non-Coding
60	NC_007595	CAA	2	6	35207	35212	66.67 %	0 %	0 %	33.33 %	Non-Coding
61	NC_007595	CCA	2	6	35219	35224	33.33 %	0 %	0 %	66.67 %	Non-Coding
62	NC_007595	GAA	2	6	35323	35328	66.67 %	0 %	33.33 %	0 %	Non-Coding
63	NC_007595	GCA	2	6	35547	35552	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
64	NC_007595	CTG	2	6	36091	36096	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
65	NC_007595	GAA	2	6	36099	36104	66.67 %	0 %	33.33 %	0 %	Non-Coding
66	NC_007595	CAC	2	6	36155	36160	33.33 %	0 %	0 %	66.67 %	Non-Coding
67	NC_007595	GAA	2	6	36178	36183	66.67 %	0 %	33.33 %	0 %	Non-Coding
68	NC_007595	CCA	2	6	36434	36439	33.33 %	0 %	0 %	66.67 %	Non-Coding
69	NC_007595	ATC	2	6	36476	36481	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
70	NC_007595	TGC	2	6	37528	37533	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
71	NC_007595	GTT	2	6	37584	37589	0 %	66.67 %	33.33 %	0 %	Non-Coding
72	NC_007595	CCG	2	6	38485	38490	0 %	0 %	33.33 %	66.67 %	Non-Coding
73	NC_007595	TGA	2	6	39238	39243	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
74	NC_007595	TGT	2	6	39246	39251	0 %	66.67 %	33.33 %	0 %	Non-Coding
75	NC_007595	CTG	2	6	39313	39318	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
76	NC_007595	AGA	2	6	39350	39355	66.67 %	0 %	33.33 %	0 %	Non-Coding
77	NC_007595	GCA	2	6	39391	39396	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
78	NC_007595	CGC	3	9	39479	39487	0 %	0 %	33.33 %	66.67 %	Non-Coding
79	NC_007595	TCA	2	6	39546	39551	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
80	NC_007595	AAC	2	6	40376	40381	66.67 %	0 %	0 %	33.33 %	Non-Coding
81	NC_007595	AGC	2	6	40414	40419	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
82	NC_007595	GTT	2	6	40450	40455	0 %	66.67 %	33.33 %	0 %	Non-Coding
83	NC_007595	AGC	2	6	42471	42476	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
84	NC_007595	GAG	2	6	43144	43149	33.33 %	0 %	66.67 %	0 %	Non-Coding
85	NC_007595	TGA	2	6	44315	44320	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
86	NC_007595	CAG	2	6	44378	44383	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
87	NC_007595	ACT	2	6	44482	44487	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
88	NC_007595	TCC	2	6	44523	44528	0 %	33.33 %	0 %	66.67 %	Non-Coding
89	NC_007595	TTC	2	6	44543	44548	0 %	66.67 %	0 %	33.33 %	Non-Coding
90	NC_007595	TGC	2	6	44587	44592	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
91	NC_007595	GAT	2	6	44752	44757	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
92	NC_007595	TGG	2	6	45812	45817	0 %	33.33 %	66.67 %	0 %	Non-Coding
93	NC_007595	ATC	2	6	46286	46291	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
94	NC_007595	AGA	2	6	46300	46305	66.67 %	0 %	33.33 %	0 %	Non-Coding
95	NC_007595	TCT	2	6	46311	46316	0 %	66.67 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.