MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Ralstonia eutropha JMP134 megaplasmid

Total Repeats: 34

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_007336	CGATGA	2	12	23116	23127	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
2	NC_007336	TGGGAG	2	12	39191	39202	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
3	NC_007336	CAAAAC	2	12	84572	84583	66.67 %	0 %	0 %	33.33 %	Non-Coding
4	NC_007336	TGCGGG	2	12	88949	88960	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
5	NC_007336	GCCCGC	2	12	97998	98009	0 %	0 %	33.33 %	66.67 %	Non-Coding
6	NC_007336	TCGTGG	2	12	120988	120999	0 %	33.33 %	50 %	16.67 %	Non-Coding
7	NC_007336	ATGCCG	2	12	125200	125211	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
8	NC_007336	GGCGCC	2	12	125998	126009	0 %	0 %	50 %	50 %	Non-Coding
9	NC_007336	GCAAGC	2	12	135815	135826	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
10	NC_007336	GATTAA	2	12	144901	144912	50 %	33.33 %	16.67 %	0 %	Non-Coding
11	NC_007336	GCTCCG	2	12	148190	148201	0 %	16.67 %	33.33 %	50 %	Non-Coding
12	NC_007336	TGTTCG	2	12	168992	169003	0 %	50 %	33.33 %	16.67 %	Non-Coding
13	NC_007336	AGGTGC	2	12	184242	184253	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
14	NC_007336	TCGACA	2	12	228724	228735	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
15	NC_007336	ACACGC	2	12	255994	256005	33.33 %	0 %	16.67 %	50 %	Non-Coding
16	NC_007336	CGGCAA	2	12	265283	265294	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17	NC_007336	CGGCAC	2	12	288506	288517	16.67 %	0 %	33.33 %	50 %	Non-Coding
18	NC_007336	CGCCAC	2	12	288617	288628	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
19	NC_007336	GGCGTC	2	12	313515	313526	0 %	16.67 %	50 %	33.33 %	Non-Coding
20	NC_007336	CGCCAC	2	12	317656	317667	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
21	NC_007336	TCACGA	2	12	317807	317818	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
22	NC_007336	GACGCG	2	12	331232	331243	16.67 %	0 %	50 %	33.33 %	Non-Coding
23	NC_007336	CCGCAG	2	12	332223	332234	16.67 %	0 %	33.33 %	50 %	Non-Coding
24	NC_007336	GTCGTG	2	12	352224	352235	0 %	33.33 %	50 %	16.67 %	Non-Coding
25	NC_007336	CCGCAG	2	12	367058	367069	16.67 %	0 %	33.33 %	50 %	Non-Coding
26	NC_007336	CATAGC	2	12	422251	422262	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
27	NC_007336	TCGGAT	2	12	457236	457247	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
28	NC_007336	ACGCGC	2	12	484238	484249	16.67 %	0 %	33.33 %	50 %	Non-Coding
29	NC_007336	TTCCTC	2	12	501419	501430	0 %	50 %	0 %	50 %	Non-Coding
30	NC_007336	AGGTCA	2	12	547722	547733	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
31	NC_007336	CACGGC	2	12	604261	604272	16.67 %	0 %	33.33 %	50 %	Non-Coding
32	NC_007336	TCATCG	2	12	613591	613602	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
33	NC_007336	TCACGA	2	12	615229	615240	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
34	NC_007336	AGAGCA	2	12	615723	615734	50 %	0 %	33.33 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.