Tetra-nucleotide Coding Repeats of Lactobacillus salivarius UCC118 plasmid pSF118-20
Total Repeats: 47
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_006529 | TTGC | 2 | 8 | 531 | 538 | 0 % | 50 % | 25 % | 25 % | 56707108 |
2 | NC_006529 | CGTT | 2 | 8 | 953 | 960 | 0 % | 50 % | 25 % | 25 % | 56707108 |
3 | NC_006529 | TTTA | 2 | 8 | 1087 | 1094 | 25 % | 75 % | 0 % | 0 % | 56707108 |
4 | NC_006529 | TTAA | 2 | 8 | 1178 | 1185 | 50 % | 50 % | 0 % | 0 % | 56707108 |
5 | NC_006529 | TAAC | 2 | 8 | 1275 | 1282 | 50 % | 25 % | 0 % | 25 % | 56707108 |
6 | NC_006529 | ATTG | 2 | 8 | 1333 | 1340 | 25 % | 50 % | 25 % | 0 % | 56707108 |
7 | NC_006529 | CAAC | 2 | 8 | 1587 | 1594 | 50 % | 0 % | 0 % | 50 % | 56707108 |
8 | NC_006529 | TTGC | 2 | 8 | 1636 | 1643 | 0 % | 50 % | 25 % | 25 % | 56707108 |
9 | NC_006529 | TCTT | 2 | 8 | 1901 | 1908 | 0 % | 75 % | 0 % | 25 % | 56707108 |
10 | NC_006529 | AGCA | 2 | 8 | 2659 | 2666 | 50 % | 0 % | 25 % | 25 % | 56707110 |
11 | NC_006529 | TGTT | 2 | 8 | 3374 | 3381 | 0 % | 75 % | 25 % | 0 % | 56707111 |
12 | NC_006529 | GTTT | 2 | 8 | 3730 | 3737 | 0 % | 75 % | 25 % | 0 % | 56707111 |
13 | NC_006529 | GTTC | 2 | 8 | 4943 | 4950 | 0 % | 50 % | 25 % | 25 % | 56707113 |
14 | NC_006529 | TTCT | 2 | 8 | 5010 | 5017 | 0 % | 75 % | 0 % | 25 % | 56707113 |
15 | NC_006529 | TCTT | 2 | 8 | 6040 | 6047 | 0 % | 75 % | 0 % | 25 % | 56707114 |
16 | NC_006529 | AGTC | 2 | 8 | 6578 | 6585 | 25 % | 25 % | 25 % | 25 % | 56707115 |
17 | NC_006529 | ATCA | 2 | 8 | 7296 | 7303 | 50 % | 25 % | 0 % | 25 % | 56707116 |
18 | NC_006529 | ACTC | 2 | 8 | 7557 | 7564 | 25 % | 25 % | 0 % | 50 % | 56707116 |
19 | NC_006529 | TTGA | 2 | 8 | 8202 | 8209 | 25 % | 50 % | 25 % | 0 % | 56707117 |
20 | NC_006529 | TGCT | 2 | 8 | 8563 | 8570 | 0 % | 50 % | 25 % | 25 % | 56707117 |
21 | NC_006529 | TTGA | 2 | 8 | 9264 | 9271 | 25 % | 50 % | 25 % | 0 % | 56707117 |
22 | NC_006529 | GAAT | 2 | 8 | 9916 | 9923 | 50 % | 25 % | 25 % | 0 % | 56707118 |
23 | NC_006529 | GATT | 2 | 8 | 9971 | 9978 | 25 % | 50 % | 25 % | 0 % | 56707118 |
24 | NC_006529 | TTGG | 3 | 12 | 10996 | 11007 | 0 % | 50 % | 50 % | 0 % | 56707119 |
25 | NC_006529 | GAAG | 2 | 8 | 12100 | 12107 | 50 % | 0 % | 50 % | 0 % | 56707121 |
26 | NC_006529 | ACGA | 2 | 8 | 12890 | 12897 | 50 % | 0 % | 25 % | 25 % | 56707124 |
27 | NC_006529 | ATAA | 2 | 8 | 13023 | 13030 | 75 % | 25 % | 0 % | 0 % | 56707124 |
28 | NC_006529 | ACAT | 2 | 8 | 14016 | 14023 | 50 % | 25 % | 0 % | 25 % | 56707125 |
29 | NC_006529 | ATTT | 2 | 8 | 14070 | 14077 | 25 % | 75 % | 0 % | 0 % | 56707125 |
30 | NC_006529 | CATT | 2 | 8 | 14503 | 14510 | 25 % | 50 % | 0 % | 25 % | 56707126 |
31 | NC_006529 | AATT | 2 | 8 | 15069 | 15076 | 50 % | 50 % | 0 % | 0 % | 56707126 |
32 | NC_006529 | ATCA | 2 | 8 | 15240 | 15247 | 50 % | 25 % | 0 % | 25 % | 56707126 |
33 | NC_006529 | GTTG | 2 | 8 | 15433 | 15440 | 0 % | 50 % | 50 % | 0 % | 56707126 |
34 | NC_006529 | TTCC | 2 | 8 | 15454 | 15461 | 0 % | 50 % | 0 % | 50 % | 56707126 |
35 | NC_006529 | CTTA | 2 | 8 | 16282 | 16289 | 25 % | 50 % | 0 % | 25 % | 56707127 |
36 | NC_006529 | GAAA | 2 | 8 | 16767 | 16774 | 75 % | 0 % | 25 % | 0 % | 56707129 |
37 | NC_006529 | ATGG | 2 | 8 | 16866 | 16873 | 25 % | 25 % | 50 % | 0 % | 56707129 |
38 | NC_006529 | GGAA | 2 | 8 | 16958 | 16965 | 50 % | 0 % | 50 % | 0 % | 56707129 |
39 | NC_006529 | TCAC | 2 | 8 | 17951 | 17958 | 25 % | 25 % | 0 % | 50 % | 56707131 |
40 | NC_006529 | AACA | 2 | 8 | 18193 | 18200 | 75 % | 0 % | 0 % | 25 % | 56707132 |
41 | NC_006529 | ACTA | 2 | 8 | 18607 | 18614 | 50 % | 25 % | 0 % | 25 % | 56707133 |
42 | NC_006529 | CAAT | 2 | 8 | 19077 | 19084 | 50 % | 25 % | 0 % | 25 % | 56707134 |
43 | NC_006529 | GAAC | 2 | 8 | 19164 | 19171 | 50 % | 0 % | 25 % | 25 % | 56707134 |
44 | NC_006529 | TTTA | 2 | 8 | 19502 | 19509 | 25 % | 75 % | 0 % | 0 % | 56707134 |
45 | NC_006529 | ATGG | 2 | 8 | 19628 | 19635 | 25 % | 25 % | 50 % | 0 % | 56707134 |
46 | NC_006529 | TGTT | 2 | 8 | 19681 | 19688 | 0 % | 75 % | 25 % | 0 % | 56707134 |
47 | NC_006529 | ATTT | 2 | 8 | 19834 | 19841 | 25 % | 75 % | 0 % | 0 % | 56707134 |